Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 SNORD111-201ENST00000408139 94 ntBASIC1.36□□□□□ -2.19
EFEMP1Q12805 RNA5SP147-201ENST00000516493 109 ntBASIC1.36□□□□□ -2.19
EFEMP1Q12805 RNU7-161P-201ENST00000517289 62 ntBASIC1.36□□□□□ -2.19
EFEMP1Q12805 AC106800.4-201ENST00000614905 153 ntBASIC1.36□□□□□ -2.19
EFEMP1Q12805 MIR548O2-201ENST00000616090 70 ntBASIC1.36□□□□□ -2.19
EFEMP1Q12805 RNA5SP403-201ENST00000363598 108 ntBASIC1.35□□□□□ -2.19
EFEMP1Q12805 RNU6-1065P-201ENST00000384513 106 ntBASIC1.35□□□□□ -2.19
EFEMP1Q12805 MIR216B-201ENST00000390186 82 ntBASIC1.35□□□□□ -2.19
EFEMP1Q12805 RNU6-994P-201ENST00000410507 111 ntBASIC1.35□□□□□ -2.19
EFEMP1Q12805 SNORD42B-201ENST00000458893 67 ntBASIC1.35□□□□□ -2.19
EFEMP1Q12805 MIR4804-201ENST00000581683 73 ntBASIC1.35□□□□□ -2.19
EFEMP1Q12805 SNORD113-4-201ENST00000364802 75 ntBASIC1.34□□□□□ -2.19
EFEMP1Q12805 Y_RNA.363-201ENST00000365529 113 ntBASIC1.34□□□□□ -2.19
EFEMP1Q12805 RNU6V-201ENST00000384105 107 ntBASIC1.34□□□□□ -2.19
EFEMP1Q12805 MIR617-201ENST00000385030 97 ntBASIC1.34□□□□□ -2.19
EFEMP1Q12805 MIR519E-201ENST00000385075 84 ntBASIC1.34□□□□□ -2.19
EFEMP1Q12805 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
EFEMP1Q12805 AL512310.8-201ENST00000550183 120 ntBASIC1.34□□□□□ -2.19
EFEMP1Q12805 MIR548V-201ENST00000584165 80 ntBASIC1.34□□□□□ -2.19
EFEMP1Q12805 uc_338.16-201ENST00000621804 95 ntBASIC1.34□□□□□ -2.19
EFEMP1Q12805 RNU6-990P-201ENST00000364385 104 ntBASIC1.33□□□□□ -2.2
EFEMP1Q12805 RNU6-260P-201ENST00000384092 107 ntBASIC1.33□□□□□ -2.2
EFEMP1Q12805 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
EFEMP1Q12805 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
EFEMP1Q12805 RNU1-119P-201ENST00000391122 165 ntBASIC1.33□□□□□ -2.2
EFEMP1Q12805 SNORA75.1-201ENST00000391130 148 ntBASIC1.33□□□□□ -2.2
EFEMP1Q12805 AC067940.1-201ENST00000458411 300 ntBASIC1.33□□□□□ -2.2
EFEMP1Q12805 snoU13.18-201ENST00000459483 104 ntBASIC1.33□□□□□ -2.2
EFEMP1Q12805 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
EFEMP1Q12805 MIR7-2-201ENST00000384970 110 ntBASIC1.32□□□□□ -2.2
EFEMP1Q12805 MIR100-201ENST00000385259 80 ntBASIC1.32□□□□□ -2.2
EFEMP1Q12805 RNU6-808P-201ENST00000391233 108 ntBASIC1.32□□□□□ -2.2
EFEMP1Q12805 RNU7-56P-201ENST00000458744 62 ntBASIC1.32□□□□□ -2.2
EFEMP1Q12805 RNU6-656P-201ENST00000516785 107 ntBASIC1.32□□□□□ -2.2
EFEMP1Q12805 RNU6-122P-201ENST00000516818 107 ntBASIC1.32□□□□□ -2.2
EFEMP1Q12805 SNORA2.1-201ENST00000363089 137 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 MIR520F-201ENST00000384824 87 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 MIR1276-201ENST00000408707 83 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 RNU6-1089P-201ENST00000516473 104 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 RN7SKP88-201ENST00000516847 250 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 SNORA40.17-201ENST00000517256 115 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 MIR3938-201ENST00000582157 103 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 7SK.8-201ENST00000612110 250 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 MIR6504-201ENST00000613520 61 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 7SK.11-201ENST00000615477 250 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 7SK.13-201ENST00000622040 250 ntBASIC1.31□□□□□ -2.2
EFEMP1Q12805 RNA5SP215-201ENST00000363440 122 ntBASIC1.3□□□□□ -2.2
EFEMP1Q12805 Y_RNA.224-201ENST00000364308 111 ntBASIC1.3□□□□□ -2.2
EFEMP1Q12805 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.3□□□□□ -2.2
EFEMP1Q12805 RNU6-902P-201ENST00000517212 91 ntBASIC1.3□□□□□ -2.2
EFEMP1Q12805 RNU6-92P-201ENST00000605893 104 ntBASIC1.3□□□□□ -2.2
EFEMP1Q12805 AL136317.1-201ENST00000612653 226 ntBASIC1.3□□□□□ -2.2
EFEMP1Q12805 Y_RNA.174-201ENST00000363781 105 ntBASIC1.29□□□□□ -2.2
EFEMP1Q12805 RNU6-1184P-201ENST00000384588 108 ntBASIC1.29□□□□□ -2.2
EFEMP1Q12805 RNU6-997P-201ENST00000384725 107 ntBASIC1.29□□□□□ -2.2
EFEMP1Q12805 MIR548C-201ENST00000384815 97 ntBASIC1.29□□□□□ -2.2
EFEMP1Q12805 AL591704.2-201ENST00000421658 181 ntBASIC1.29□□□□□ -2.2
EFEMP1Q12805 RNU7-21P-201ENST00000459430 62 ntBASIC1.29□□□□□ -2.2
EFEMP1Q12805 AC067863.3-201ENST00000624172 122 ntBASIC1.29□□□□□ -2.2
EFEMP1Q12805 SNORD60.1-201ENST00000362451 73 ntBASIC1.28□□□□□ -2.2
EFEMP1Q12805 RNU6-302P-201ENST00000365249 107 ntBASIC1.28□□□□□ -2.2
EFEMP1Q12805 RNA5SP117-201ENST00000365294 118 ntBASIC1.28□□□□□ -2.2
EFEMP1Q12805 MIR489-201ENST00000384923 84 ntBASIC1.28□□□□□ -2.2
EFEMP1Q12805 MIR4285-201ENST00000581001 85 ntBASIC1.28□□□□□ -2.2
EFEMP1Q12805 MIR1-1-201ENST00000362147 71 ntBASIC1.27□□□□□ -2.21
EFEMP1Q12805 MIR630-201ENST00000384957 97 ntBASIC1.27□□□□□ -2.21
EFEMP1Q12805 AL157398.1-201ENST00000452981 186 ntBASIC1.27□□□□□ -2.21
EFEMP1Q12805 MIR7974-201ENST00000615835 79 ntBASIC1.27□□□□□ -2.21
EFEMP1Q12805 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
EFEMP1Q12805 RNU6-1312P-201ENST00000362425 108 ntBASIC1.26□□□□□ -2.21
EFEMP1Q12805 MIR644A-201ENST00000385262 94 ntBASIC1.26□□□□□ -2.21
EFEMP1Q12805 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
EFEMP1Q12805 snoU13.13-201ENST00000458842 104 ntBASIC1.26□□□□□ -2.21
EFEMP1Q12805 MIR6739-201ENST00000622461 75 ntBASIC1.26□□□□□ -2.21
EFEMP1Q12805 SNORA80D-201ENST00000384488 135 ntBASIC1.25□□□□□ -2.21
EFEMP1Q12805 RNU7-90P-201ENST00000459216 62 ntBASIC1.25□□□□□ -2.21
EFEMP1Q12805 MIR4460-201ENST00000577862 86 ntBASIC1.25□□□□□ -2.21
EFEMP1Q12805 MT-TY-201ENST00000387409 66 ntBASIC1.24□□□□□ -2.21
EFEMP1Q12805 MIR548L-201ENST00000408303 86 ntBASIC1.24□□□□□ -2.21
EFEMP1Q12805 AC018659.1-201ENST00000551083 169 ntBASIC1.24□□□□□ -2.21
EFEMP1Q12805 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.24□□□□□ -2.21
EFEMP1Q12805 RMST_2.1-201ENST00000617263 136 ntBASIC1.24□□□□□ -2.21
EFEMP1Q12805 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.23□□□□□ -2.21
EFEMP1Q12805 RNU7-74P-201ENST00000459104 62 ntBASIC1.23□□□□□ -2.21
EFEMP1Q12805 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.23□□□□□ -2.21
EFEMP1Q12805 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.23□□□□□ -2.21
EFEMP1Q12805 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
EFEMP1Q12805 RNU6-1162P-201ENST00000384443 104 ntBASIC1.22□□□□□ -2.21
EFEMP1Q12805 MIR1827-201ENST00000408549 66 ntBASIC1.22□□□□□ -2.21
EFEMP1Q12805 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.22□□□□□ -2.21
EFEMP1Q12805 SNORD79.1-201ENST00000516069 84 ntBASIC1.22□□□□□ -2.21
EFEMP1Q12805 MIR4452-201ENST00000583004 71 ntBASIC1.22□□□□□ -2.21
EFEMP1Q12805 AC244669.1-204ENST00000621564 178 ntBASIC1.22□□□□□ -2.21
EFEMP1Q12805 RNU4-88P-201ENST00000411220 86 ntBASIC1.21□□□□□ -2.22
EFEMP1Q12805 RPS29P23-201ENST00000458635 123 ntBASIC1.21□□□□□ -2.22
EFEMP1Q12805 RNU5B-6P-201ENST00000516765 68 ntBASIC1.21□□□□□ -2.22
EFEMP1Q12805 RNA5SP102-201ENST00000516865 106 ntBASIC1.21□□□□□ -2.22
EFEMP1Q12805 RNU6-716P-201ENST00000365621 103 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms