Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 U7.2-201ENST00000607576 63 ntBASIC-0.81□□□□□ -2.54
CCNA1P78396 AC021146.6-201ENST00000514659 117 ntBASIC-0.82□□□□□ -2.54
CCNA1P78396 AC025166.1-201ENST00000612411 163 ntBASIC-0.82□□□□□ -2.54
CCNA1P78396 MIR6738-201ENST00000619620 64 ntBASIC-0.82□□□□□ -2.54
CCNA1P78396 AC025521.1-201ENST00000621624 286 ntBASIC-0.82□□□□□ -2.54
CCNA1P78396 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.83□□□□□ -2.54
CCNA1P78396 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.83□□□□□ -2.54
CCNA1P78396 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.83□□□□□ -2.54
CCNA1P78396 SNORD83B-201ENST00000386745 93 ntBASIC-0.83□□□□□ -2.54
CCNA1P78396 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.83□□□□□ -2.54
CCNA1P78396 SNORD2-201ENST00000459163 69 ntBASIC-0.83□□□□□ -2.54
CCNA1P78396 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.83□□□□□ -2.54
CCNA1P78396 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.83□□□□□ -2.54
CCNA1P78396 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 SNORD58C-201ENST00000365223 64 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 RNU6-804P-201ENST00000384286 107 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 RNU6-463P-201ENST00000384340 107 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 SNORD42B-201ENST00000458893 67 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 FGF7P7-201ENST00000514120 227 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 RNU6-388P-201ENST00000517012 105 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 RNU6-389P-201ENST00000517048 105 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 MIR5704-201ENST00000584029 77 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 MIR4324-201ENST00000584846 72 ntBASIC-0.84□□□□□ -2.54
CCNA1P78396 MTND5P18-201ENST00000445624 1801 ntBASIC-0.85□□□□□ -2.54
CCNA1P78396 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 RNU6-379P-201ENST00000363813 104 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 SNORD114-4-201ENST00000363962 75 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 RNU6-973P-201ENST00000364690 107 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 MIR577-201ENST00000385196 96 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 MIR569-201ENST00000385228 96 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 RNU6-65P-201ENST00000516332 98 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.85□□□□□ -2.55
CCNA1P78396 RNU6-10P-201ENST00000384036 107 ntBASIC-0.86□□□□□ -2.55
CCNA1P78396 RNU6-476P-201ENST00000384726 107 ntBASIC-0.86□□□□□ -2.55
CCNA1P78396 MIR587-201ENST00000384845 96 ntBASIC-0.86□□□□□ -2.55
CCNA1P78396 U3.27-201ENST00000391237 200 ntBASIC-0.86□□□□□ -2.55
CCNA1P78396 RNU6-394P-201ENST00000410735 107 ntBASIC-0.86□□□□□ -2.55
CCNA1P78396 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.86□□□□□ -2.55
CCNA1P78396 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.86□□□□□ -2.55
CCNA1P78396 RNA5SP272-201ENST00000516095 111 ntBASIC-0.86□□□□□ -2.55
CCNA1P78396 RNU6-719P-201ENST00000516671 104 ntBASIC-0.86□□□□□ -2.55
CCNA1P78396 AC004792.1-201ENST00000614523 137 ntBASIC-0.86□□□□□ -2.55
CCNA1P78396 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.87□□□□□ -2.55
CCNA1P78396 SNORD57-201ENST00000448188 72 ntBASIC-0.87□□□□□ -2.55
CCNA1P78396 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.87□□□□□ -2.55
CCNA1P78396 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.87□□□□□ -2.55
CCNA1P78396 MIR4536-1-201ENST00000583537 88 ntBASIC-0.87□□□□□ -2.55
CCNA1P78396 AL035470.1-201ENST00000622571 220 ntBASIC-0.87□□□□□ -2.55
CCNA1P78396 MIR409-201ENST00000362237 79 ntBASIC-0.88□□□□□ -2.55
CCNA1P78396 RNU6-502P-201ENST00000362419 108 ntBASIC-0.88□□□□□ -2.55
CCNA1P78396 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.88□□□□□ -2.55
CCNA1P78396 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.88□□□□□ -2.55
CCNA1P78396 RNY1P9-201ENST00000532431 109 ntBASIC-0.88□□□□□ -2.55
CCNA1P78396 MIR4694-201ENST00000578534 80 ntBASIC-0.88□□□□□ -2.55
CCNA1P78396 SNORD50.2-201ENST00000365465 70 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 SNORA13-201ENST00000458790 133 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 RNU7-85P-201ENST00000458851 63 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 AL513043.2-201ENST00000573941 143 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 MIR3179-1-201ENST00000578940 84 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 MIR3179-2-201ENST00000579107 84 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 MIR3144-201ENST00000579460 79 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 MIR3179-3-201ENST00000579566 84 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 MIR3179-4-201ENST00000617599 84 ntBASIC-0.89□□□□□ -2.55
CCNA1P78396 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.9□□□□□ -2.55
CCNA1P78396 RNU6-832P-201ENST00000363319 107 ntBASIC-0.91□□□□□ -2.56
CCNA1P78396 RNU6-132P-201ENST00000383863 107 ntBASIC-0.91□□□□□ -2.56
CCNA1P78396 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.91□□□□□ -2.56
CCNA1P78396 MIR518B-201ENST00000385127 83 ntBASIC-0.91□□□□□ -2.56
CCNA1P78396 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.91□□□□□ -2.56
CCNA1P78396 RNU6-721P-201ENST00000410155 105 ntBASIC-0.91□□□□□ -2.56
CCNA1P78396 RNU6-772P-201ENST00000516042 105 ntBASIC-0.91□□□□□ -2.56
CCNA1P78396 SNORD22.1-201ENST00000516331 125 ntBASIC-0.91□□□□□ -2.56
CCNA1P78396 RNU6-426P-201ENST00000516464 97 ntBASIC-0.91□□□□□ -2.56
CCNA1P78396 RNU6-881P-201ENST00000516813 102 ntBASIC-0.91□□□□□ -2.56
CCNA1P78396 SNORA63.6-201ENST00000364921 119 ntBASIC-0.92□□□□□ -2.56
CCNA1P78396 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.92□□□□□ -2.56
CCNA1P78396 MIR6854-201ENST00000614935 69 ntBASIC-0.92□□□□□ -2.56
CCNA1P78396 snoR1.1-201ENST00000628177 80 ntBASIC-0.92□□□□□ -2.56
CCNA1P78396 RNY3P2-201ENST00000362918 102 ntBASIC-0.93□□□□□ -2.56
CCNA1P78396 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.93□□□□□ -2.56
CCNA1P78396 RNU6-24P-201ENST00000384440 107 ntBASIC-0.93□□□□□ -2.56
CCNA1P78396 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.93□□□□□ -2.56
CCNA1P78396 RNA5SP470-201ENST00000516463 106 ntBASIC-0.93□□□□□ -2.56
CCNA1P78396 MTND5P41-201ENST00000517498 206 ntBASIC-0.93□□□□□ -2.56
CCNA1P78396 MIR6773-201ENST00000612812 74 ntBASIC-0.93□□□□□ -2.56
CCNA1P78396 MIR8068-201ENST00000618032 68 ntBASIC-0.93□□□□□ -2.56
CCNA1P78396 MIR378F-201ENST00000578143 78 ntBASIC-0.94□□□□□ -2.56
CCNA1P78396 MIR3613-201ENST00000579844 87 ntBASIC-0.94□□□□□ -2.56
CCNA1P78396 MIR3140-201ENST00000583685 90 ntBASIC-0.94□□□□□ -2.56
CCNA1P78396 RNU4-32P-201ENST00000363404 141 ntBASIC-0.95□□□□□ -2.56
CCNA1P78396 RNU4-36P-201ENST00000364294 144 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms