Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.52□□□□□ -2.49
LIM2P55344 RNU6-80P-201ENST00000384195 107 ntBASIC-0.52□□□□□ -2.49
LIM2P55344 MIR451A-201ENST00000385059 72 ntBASIC-0.52□□□□□ -2.49
LIM2P55344 RNU7-107P-201ENST00000459121 61 ntBASIC-0.52□□□□□ -2.49
LIM2P55344 RNU6-65P-201ENST00000516332 98 ntBASIC-0.52□□□□□ -2.49
LIM2P55344 RNU6-255P-201ENST00000516957 105 ntBASIC-0.52□□□□□ -2.49
LIM2P55344 MIR4536-1-201ENST00000583537 88 ntBASIC-0.52□□□□□ -2.49
LIM2P55344 SNORD114-4-201ENST00000363962 75 ntBASIC-0.53□□□□□ -2.49
LIM2P55344 SNORD45B-201ENST00000364617 72 ntBASIC-0.53□□□□□ -2.49
LIM2P55344 RNU6-900P-201ENST00000384498 102 ntBASIC-0.53□□□□□ -2.49
LIM2P55344 MIR9-2-201ENST00000384838 87 ntBASIC-0.53□□□□□ -2.49
LIM2P55344 MIR604-201ENST00000384880 94 ntBASIC-0.53□□□□□ -2.49
LIM2P55344 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.53□□□□□ -2.49
LIM2P55344 RNA5SP66-201ENST00000517178 101 ntBASIC-0.53□□□□□ -2.49
LIM2P55344 MIR5009-201ENST00000578736 100 ntBASIC-0.53□□□□□ -2.49
LIM2P55344 AC090425.1-201ENST00000610007 140 ntBASIC-0.53□□□□□ -2.49
LIM2P55344 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.54□□□□□ -2.5
LIM2P55344 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
LIM2P55344 RNU6-971P-201ENST00000516920 106 ntBASIC-0.54□□□□□ -2.5
LIM2P55344 AL513043.2-201ENST00000573941 143 ntBASIC-0.54□□□□□ -2.5
LIM2P55344 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.54□□□□□ -2.5
LIM2P55344 U6.95-201ENST00000636931 70 ntBASIC-0.54□□□□□ -2.5
LIM2P55344 RNU6-346P-201ENST00000516288 111 ntBASIC-0.55□□□□□ -2.5
LIM2P55344 MIR3613-201ENST00000579844 87 ntBASIC-0.55□□□□□ -2.5
LIM2P55344 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.56□□□□□ -2.5
LIM2P55344 SNORD114-11-201ENST00000363738 75 ntBASIC-0.56□□□□□ -2.5
LIM2P55344 RNU6-813P-201ENST00000384691 107 ntBASIC-0.56□□□□□ -2.5
LIM2P55344 MIR196A2-201ENST00000385189 110 ntBASIC-0.56□□□□□ -2.5
LIM2P55344 RNU6-644P-201ENST00000391155 98 ntBASIC-0.56□□□□□ -2.5
LIM2P55344 RNU7-85P-201ENST00000458851 63 ntBASIC-0.56□□□□□ -2.5
LIM2P55344 RNU6-659P-201ENST00000516454 104 ntBASIC-0.56□□□□□ -2.5
LIM2P55344 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.56□□□□□ -2.5
LIM2P55344 AP000676.1-201ENST00000533307 52 ntBASIC-0.56□□□□□ -2.5
LIM2P55344 SNORD115-25-201ENST00000362619 82 ntBASIC-0.57□□□□□ -2.5
LIM2P55344 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.57□□□□□ -2.5
LIM2P55344 RNU6-54P-201ENST00000365563 107 ntBASIC-0.57□□□□□ -2.5
LIM2P55344 SNORA49-201ENST00000386157 136 ntBASIC-0.57□□□□□ -2.5
LIM2P55344 RNA5SP25-201ENST00000410815 110 ntBASIC-0.57□□□□□ -2.5
LIM2P55344 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.57□□□□□ -2.5
LIM2P55344 AC145423.2-201ENST00000610631 239 ntBASIC-0.57□□□□□ -2.5
LIM2P55344 MIR6086-201ENST00000638065 55 ntBASIC-0.57□□□□□ -2.5
LIM2P55344 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.58□□□□□ -2.5
LIM2P55344 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.58□□□□□ -2.5
LIM2P55344 MIR548A1-201ENST00000385041 97 ntBASIC-0.58□□□□□ -2.5
LIM2P55344 MIR548A3-201ENST00000385297 97 ntBASIC-0.58□□□□□ -2.5
LIM2P55344 RNU6-284P-201ENST00000411105 106 ntBASIC-0.58□□□□□ -2.5
LIM2P55344 RNU7-55P-201ENST00000459426 62 ntBASIC-0.58□□□□□ -2.5
LIM2P55344 MIR548AZ-201ENST00000616567 95 ntBASIC-0.58□□□□□ -2.5
LIM2P55344 AC093726.3-201ENST00000637588 150 ntBASIC-0.58□□□□□ -2.5
LIM2P55344 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.59□□□□□ -2.5
LIM2P55344 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.59□□□□□ -2.5
LIM2P55344 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.59□□□□□ -2.5
LIM2P55344 MIR548U-201ENST00000390728 81 ntBASIC-0.59□□□□□ -2.5
LIM2P55344 SNORD33.1-201ENST00000516213 88 ntBASIC-0.59□□□□□ -2.5
LIM2P55344 SNORA40.17-201ENST00000517256 115 ntBASIC-0.59□□□□□ -2.5
LIM2P55344 MIR4432-201ENST00000581823 84 ntBASIC-0.59□□□□□ -2.5
LIM2P55344 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.6□□□□□ -2.51
LIM2P55344 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.6□□□□□ -2.51
LIM2P55344 RNU6-907P-201ENST00000390924 102 ntBASIC-0.6□□□□□ -2.51
LIM2P55344 RPS29P8-201ENST00000445109 171 ntBASIC-0.6□□□□□ -2.51
LIM2P55344 AC114755.3-201ENST00000481111 251 ntBASIC-0.6□□□□□ -2.51
LIM2P55344 AC108676.2-201ENST00000605225 163 ntBASIC-0.6□□□□□ -2.51
LIM2P55344 SNORA63.2-201ENST00000362603 126 ntBASIC-0.61□□□□□ -2.51
LIM2P55344 RNU4-36P-201ENST00000364294 144 ntBASIC-0.61□□□□□ -2.51
LIM2P55344 RNA5SP368-201ENST00000364298 116 ntBASIC-0.61□□□□□ -2.51
LIM2P55344 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.61□□□□□ -2.51
LIM2P55344 MIR548E-201ENST00000408287 88 ntBASIC-0.61□□□□□ -2.51
LIM2P55344 AC103810.7-201ENST00000607821 91 ntBASIC-0.61□□□□□ -2.51
LIM2P55344 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.62□□□□□ -2.51
LIM2P55344 MIR582-201ENST00000365731 98 ntBASIC-0.62□□□□□ -2.51
LIM2P55344 RNU6-132P-201ENST00000383863 107 ntBASIC-0.62□□□□□ -2.51
LIM2P55344 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.62□□□□□ -2.51
LIM2P55344 SNORD42B-201ENST00000458893 67 ntBASIC-0.62□□□□□ -2.51
LIM2P55344 SNORD4B-201ENST00000459083 72 ntBASIC-0.62□□□□□ -2.51
LIM2P55344 FGF7P7-201ENST00000514120 227 ntBASIC-0.62□□□□□ -2.51
LIM2P55344 RNU6-762P-201ENST00000517107 102 ntBASIC-0.62□□□□□ -2.51
LIM2P55344 MIR3064-201ENST00000581130 66 ntBASIC-0.62□□□□□ -2.51
LIM2P55344 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.63□□□□□ -2.51
LIM2P55344 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.63□□□□□ -2.51
LIM2P55344 RNU6-901P-201ENST00000384593 106 ntBASIC-0.63□□□□□ -2.51
LIM2P55344 SNORD56B-201ENST00000384713 71 ntBASIC-0.63□□□□□ -2.51
LIM2P55344 MIR224-201ENST00000384889 81 ntBASIC-0.63□□□□□ -2.51
LIM2P55344 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.63□□□□□ -2.51
LIM2P55344 RNU6-412P-201ENST00000516434 106 ntBASIC-0.63□□□□□ -2.51
LIM2P55344 RNU6-719P-201ENST00000516671 104 ntBASIC-0.63□□□□□ -2.51
LIM2P55344 MIR4777-201ENST00000583710 86 ntBASIC-0.63□□□□□ -2.51
LIM2P55344 uc_338.36-201ENST00000622331 158 ntBASIC-0.63□□□□□ -2.51
LIM2P55344 SNORD114-14-201ENST00000362723 75 ntBASIC-0.64□□□□□ -2.51
LIM2P55344 SNORD114-15-201ENST00000364687 72 ntBASIC-0.64□□□□□ -2.51
LIM2P55344 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.64□□□□□ -2.51
LIM2P55344 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.64□□□□□ -2.51
LIM2P55344 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
LIM2P55344 MIR4280-201ENST00000582178 76 ntBASIC-0.64□□□□□ -2.51
LIM2P55344 AC104996.3-201ENST00000590718 94 ntBASIC-0.64□□□□□ -2.51
LIM2P55344 RNU6-495P-201ENST00000362995 107 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 SNORD116-14-201ENST00000383894 92 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 SNORD116-17-201ENST00000383929 92 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 SNORD116-15-201ENST00000384445 92 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 RNU6-880P-201ENST00000384526 107 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 SNORD116-19-201ENST00000384729 92 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 313.3 ms