Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MIR676-201ENST00000390702 67 ntBASIC2.35□□□□□ -2.03
NUBP1P53384 RNA5SP210-201ENST00000391034 120 ntBASIC2.35□□□□□ -2.03
NUBP1P53384 RNU6-1110P-201ENST00000516462 101 ntBASIC2.35□□□□□ -2.03
NUBP1P53384 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.35□□□□□ -2.03
NUBP1P53384 RNU6-1312P-201ENST00000362425 108 ntBASIC2.34□□□□□ -2.03
NUBP1P53384 RNU6-716P-201ENST00000365621 103 ntBASIC2.34□□□□□ -2.03
NUBP1P53384 AL356379.1-201ENST00000414105 126 ntBASIC2.34□□□□□ -2.03
NUBP1P53384 snoU13.13-201ENST00000458842 104 ntBASIC2.34□□□□□ -2.03
NUBP1P53384 RNA5SP47-201ENST00000517230 109 ntBASIC2.34□□□□□ -2.03
NUBP1P53384 SNORD18A-201ENST00000363753 72 ntBASIC2.33□□□□□ -2.04
NUBP1P53384 MIR758-201ENST00000390227 88 ntBASIC2.33□□□□□ -2.04
NUBP1P53384 RNA5SP182-201ENST00000516064 82 ntBASIC2.33□□□□□ -2.04
NUBP1P53384 RNU7-174P-201ENST00000516248 59 ntBASIC2.33□□□□□ -2.04
NUBP1P53384 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
NUBP1P53384 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
NUBP1P53384 DEFA7P-201ENST00000382676 285 ntBASIC2.32□□□□□ -2.04
NUBP1P53384 RNU6-321P-201ENST00000410912 106 ntBASIC2.32□□□□□ -2.04
NUBP1P53384 AL096840.1-201ENST00000603287 93 ntBASIC2.32□□□□□ -2.04
NUBP1P53384 U2.7-201ENST00000619197 100 ntBASIC2.32□□□□□ -2.04
NUBP1P53384 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
NUBP1P53384 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NUBP1P53384 Y_RNA.379-201ENST00000365653 102 ntBASIC2.31□□□□□ -2.04
NUBP1P53384 SNORD105-201ENST00000386910 85 ntBASIC2.31□□□□□ -2.04
NUBP1P53384 SNORD89-201ENST00000390981 114 ntBASIC2.31□□□□□ -2.04
NUBP1P53384 RNU6-269P-201ENST00000391077 97 ntBASIC2.31□□□□□ -2.04
NUBP1P53384 FABP5P4-201ENST00000437203 171 ntBASIC2.31□□□□□ -2.04
NUBP1P53384 AC002429.1-201ENST00000437672 148 ntBASIC2.31□□□□□ -2.04
NUBP1P53384 RNU7-119P-201ENST00000459279 63 ntBASIC2.31□□□□□ -2.04
NUBP1P53384 snoU13.18-201ENST00000459483 104 ntBASIC2.31□□□□□ -2.04
NUBP1P53384 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.31□□□□□ -2.04
NUBP1P53384 AC108667.1-201ENST00000428618 249 ntBASIC2.3□□□□□ -2.04
NUBP1P53384 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
NUBP1P53384 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
NUBP1P53384 MIR489-201ENST00000384923 84 ntBASIC2.29□□□□□ -2.04
NUBP1P53384 MIR8070-201ENST00000616510 88 ntBASIC2.29□□□□□ -2.04
NUBP1P53384 MIR378A-201ENST00000362177 66 ntBASIC2.28□□□□□ -2.04
NUBP1P53384 U7.7-201ENST00000459276 60 ntBASIC2.28□□□□□ -2.04
NUBP1P53384 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.28□□□□□ -2.04
NUBP1P53384 AL137847.3-201ENST00000611521 109 ntBASIC2.28□□□□□ -2.04
NUBP1P53384 MIR6845-201ENST00000613182 61 ntBASIC2.28□□□□□ -2.04
NUBP1P53384 Y_RNA.125-201ENST00000363371 111 ntBASIC2.27□□□□□ -2.05
NUBP1P53384 MIR583-201ENST00000384846 75 ntBASIC2.27□□□□□ -2.05
NUBP1P53384 RNU1-92P-201ENST00000517017 135 ntBASIC2.27□□□□□ -2.05
NUBP1P53384 MIR3678-201ENST00000578455 94 ntBASIC2.27□□□□□ -2.05
NUBP1P53384 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NUBP1P53384 MIR6073-201ENST00000352083 89 ntBASIC2.26□□□□□ -2.05
NUBP1P53384 RNA5SP181-201ENST00000410246 98 ntBASIC2.26□□□□□ -2.05
NUBP1P53384 RNA5SP484-201ENST00000458857 111 ntBASIC2.26□□□□□ -2.05
NUBP1P53384 SCARNA16.5-201ENST00000517114 183 ntBASIC2.26□□□□□ -2.05
NUBP1P53384 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.26□□□□□ -2.05
NUBP1P53384 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
NUBP1P53384 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NUBP1P53384 SNORA63.6-201ENST00000364921 119 ntBASIC2.25□□□□□ -2.05
NUBP1P53384 RNU4-88P-201ENST00000411220 86 ntBASIC2.25□□□□□ -2.05
NUBP1P53384 Y_RNA.633-201ENST00000459107 95 ntBASIC2.25□□□□□ -2.05
NUBP1P53384 SCARNA17.3-201ENST00000516381 125 ntBASIC2.25□□□□□ -2.05
NUBP1P53384 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
NUBP1P53384 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NUBP1P53384 SNORA33.1-201ENST00000364957 130 ntBASIC2.24□□□□□ -2.05
NUBP1P53384 Y_RNA.407-201ENST00000383986 113 ntBASIC2.24□□□□□ -2.05
NUBP1P53384 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.24□□□□□ -2.05
NUBP1P53384 HMGN2P38-201ENST00000423806 265 ntBASIC2.24□□□□□ -2.05
NUBP1P53384 U4.4-201ENST00000620626 117 ntBASIC2.24□□□□□ -2.05
NUBP1P53384 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NUBP1P53384 SNORA48.3-201ENST00000391081 134 ntBASIC2.23□□□□□ -2.05
NUBP1P53384 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.22□□□□□ -2.05
NUBP1P53384 TRMT112P2-201ENST00000512910 132 ntBASIC2.22□□□□□ -2.05
NUBP1P53384 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.05
NUBP1P53384 Y_RNA.246-201ENST00000364495 108 ntBASIC2.21□□□□□ -2.06
NUBP1P53384 SNORA25-201ENST00000384384 134 ntBASIC2.2□□□□□ -2.06
NUBP1P53384 MIR517C-201ENST00000385103 95 ntBASIC2.2□□□□□ -2.06
NUBP1P53384 MIR548AD-201ENST00000584780 82 ntBASIC2.2□□□□□ -2.06
NUBP1P53384 MIR6766-201ENST00000622641 72 ntBASIC2.2□□□□□ -2.06
NUBP1P53384 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NUBP1P53384 AL162376.1-201ENST00000624117 175 ntBASIC2.19□□□□□ -2.06
NUBP1P53384 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUBP1P53384 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NUBP1P53384 RNU6-753P-201ENST00000363926 107 ntBASIC2.18□□□□□ -2.06
NUBP1P53384 MIR573-201ENST00000384964 99 ntBASIC2.18□□□□□ -2.06
NUBP1P53384 MIR3612-201ENST00000579753 87 ntBASIC2.18□□□□□ -2.06
NUBP1P53384 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
NUBP1P53384 SNORA25.8-201ENST00000364831 128 ntBASIC2.17□□□□□ -2.06
NUBP1P53384 MIR652-201ENST00000385278 98 ntBASIC2.17□□□□□ -2.06
NUBP1P53384 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUBP1P53384 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
NUBP1P53384 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
NUBP1P53384 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
NUBP1P53384 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NUBP1P53384 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
NUBP1P53384 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
NUBP1P53384 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
NUBP1P53384 RNA5SP227-201ENST00000516184 113 ntBASIC2.15□□□□□ -2.07
NUBP1P53384 AC025627.3-201ENST00000582078 182 ntBASIC2.15□□□□□ -2.07
NUBP1P53384 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
NUBP1P53384 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.14□□□□□ -2.07
NUBP1P53384 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
NUBP1P53384 SNORA67.5-201ENST00000391036 107 ntBASIC2.14□□□□□ -2.07
NUBP1P53384 AC006210.1-201ENST00000424882 111 ntBASIC2.14□□□□□ -2.07
NUBP1P53384 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.14□□□□□ -2.07
NUBP1P53384 RNU4-52P-201ENST00000384209 138 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms