Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MIR3144-201ENST00000579460 79 ntBASIC-0.95□□□□□ -2.56
CASP4P49662 RNU6-502P-201ENST00000362419 108 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 RNA5SP368-201ENST00000364298 116 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 RNU6-804P-201ENST00000384286 107 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 MIR577-201ENST00000385196 96 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 MT-TQ-201ENST00000387372 72 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 SNORD38.3-201ENST00000516599 73 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 MIR4536-1-201ENST00000583537 88 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 MIR4436A-201ENST00000585278 85 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 AC025521.1-201ENST00000621624 286 ntBASIC-0.96□□□□□ -2.56
CASP4P49662 RNU6-35P-201ENST00000384530 107 ntBASIC-0.97□□□□□ -2.56
CASP4P49662 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.97□□□□□ -2.56
CASP4P49662 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.98□□□□□ -2.57
CASP4P49662 SNORD95.1-201ENST00000364099 68 ntBASIC-0.98□□□□□ -2.57
CASP4P49662 SNORD50.2-201ENST00000365465 70 ntBASIC-0.98□□□□□ -2.57
CASP4P49662 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.98□□□□□ -2.57
CASP4P49662 MIR1265-201ENST00000408444 86 ntBASIC-0.98□□□□□ -2.57
CASP4P49662 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.99□□□□□ -2.57
CASP4P49662 MIR4679-2-201ENST00000578358 77 ntBASIC-0.99□□□□□ -2.57
CASP4P49662 RNU6-86P-201ENST00000606534 107 ntBASIC-0.99□□□□□ -2.57
CASP4P49662 MIRLET7F1-201ENST00000362202 87 ntBASIC-1□□□□□ -2.57
CASP4P49662 RNY3P2-201ENST00000362918 102 ntBASIC-1□□□□□ -2.57
CASP4P49662 RNU6-832P-201ENST00000363319 107 ntBASIC-1□□□□□ -2.57
CASP4P49662 Y_RNA.371-201ENST00000365591 113 ntBASIC-1□□□□□ -2.57
CASP4P49662 RNA5SP25-201ENST00000410815 110 ntBASIC-1□□□□□ -2.57
CASP4P49662 SNORD42B-201ENST00000458893 67 ntBASIC-1□□□□□ -2.57
CASP4P49662 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1□□□□□ -2.57
CASP4P49662 MIR4439-201ENST00000583746 80 ntBASIC-1□□□□□ -2.57
CASP4P49662 RNU6-476P-201ENST00000384726 107 ntBASIC-1.01□□□□□ -2.57
CASP4P49662 MIR518B-201ENST00000385127 83 ntBASIC-1.01□□□□□ -2.57
CASP4P49662 FGF7P7-201ENST00000514120 227 ntBASIC-1.01□□□□□ -2.57
CASP4P49662 RNU6-182P-201ENST00000516970 105 ntBASIC-1.01□□□□□ -2.57
CASP4P49662 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.02□□□□□ -2.57
CASP4P49662 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.02□□□□□ -2.57
CASP4P49662 RNU7-85P-201ENST00000458851 63 ntBASIC-1.02□□□□□ -2.57
CASP4P49662 AC097510.1-201ENST00000510945 133 ntBASIC-1.02□□□□□ -2.57
CASP4P49662 RNU6-881P-201ENST00000516813 102 ntBASIC-1.02□□□□□ -2.57
CASP4P49662 AL513043.2-201ENST00000573941 143 ntBASIC-1.02□□□□□ -2.57
CASP4P49662 MIR4719-201ENST00000585233 84 ntBASIC-1.02□□□□□ -2.57
CASP4P49662 AL353621.2-201ENST00000605340 133 ntBASIC-1.02□□□□□ -2.57
CASP4P49662 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.03□□□□□ -2.57
CASP4P49662 MIR548U-201ENST00000390728 81 ntBASIC-1.03□□□□□ -2.57
CASP4P49662 MIR3179-1-201ENST00000578940 84 ntBASIC-1.03□□□□□ -2.57
CASP4P49662 MIR3179-2-201ENST00000579107 84 ntBASIC-1.03□□□□□ -2.57
CASP4P49662 MIR3179-3-201ENST00000579566 84 ntBASIC-1.03□□□□□ -2.57
CASP4P49662 MIR3179-4-201ENST00000617599 84 ntBASIC-1.03□□□□□ -2.57
CASP4P49662 SNORA63.2-201ENST00000362603 126 ntBASIC-1.04□□□□□ -2.58
CASP4P49662 SNORA63.6-201ENST00000364921 119 ntBASIC-1.04□□□□□ -2.58
CASP4P49662 RNU4-63P-201ENST00000411313 118 ntBASIC-1.04□□□□□ -2.58
CASP4P49662 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.04□□□□□ -2.58
CASP4P49662 RNU6-772P-201ENST00000516042 105 ntBASIC-1.04□□□□□ -2.58
CASP4P49662 RNU6-426P-201ENST00000516464 97 ntBASIC-1.04□□□□□ -2.58
CASP4P49662 RNU6-719P-201ENST00000516671 104 ntBASIC-1.04□□□□□ -2.58
CASP4P49662 AL035470.1-201ENST00000622571 220 ntBASIC-1.04□□□□□ -2.58
CASP4P49662 RNU4-36P-201ENST00000364294 144 ntBASIC-1.05□□□□□ -2.58
CASP4P49662 SNORD45B-201ENST00000364617 72 ntBASIC-1.05□□□□□ -2.58
CASP4P49662 MIR6854-201ENST00000614935 69 ntBASIC-1.05□□□□□ -2.58
CASP4P49662 AL157777.2-201ENST00000258070 137 ntBASIC-1.06□□□□□ -2.58
CASP4P49662 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.06□□□□□ -2.58
CASP4P49662 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.06□□□□□ -2.58
CASP4P49662 RNA5SP272-201ENST00000516095 111 ntBASIC-1.06□□□□□ -2.58
CASP4P49662 AC068339.1-201ENST00000526965 141 ntBASIC-1.06□□□□□ -2.58
CASP4P49662 MIR5704-201ENST00000584029 77 ntBASIC-1.06□□□□□ -2.58
CASP4P49662 MIR6773-201ENST00000612812 74 ntBASIC-1.06□□□□□ -2.58
CASP4P49662 snoR1.1-201ENST00000628177 80 ntBASIC-1.06□□□□□ -2.58
CASP4P49662 SNORD74.6-201ENST00000364796 70 ntBASIC-1.07□□□□□ -2.58
CASP4P49662 RNU6-644P-201ENST00000391155 98 ntBASIC-1.07□□□□□ -2.58
CASP4P49662 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.07□□□□□ -2.58
CASP4P49662 MTND4LP9-201ENST00000427694 174 ntBASIC-1.07□□□□□ -2.58
CASP4P49662 MTND5P41-201ENST00000517498 206 ntBASIC-1.07□□□□□ -2.58
CASP4P49662 RNU6-495P-201ENST00000362995 107 ntBASIC-1.08□□□□□ -2.58
CASP4P49662 RNU6-132P-201ENST00000383863 107 ntBASIC-1.08□□□□□ -2.58
CASP4P49662 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.08□□□□□ -2.58
CASP4P49662 SNORD22.1-201ENST00000516331 125 ntBASIC-1.08□□□□□ -2.58
CASP4P49662 RNA5SP395-201ENST00000516567 118 ntBASIC-1.08□□□□□ -2.58
CASP4P49662 MIR3064-201ENST00000581130 66 ntBASIC-1.08□□□□□ -2.58
CASP4P49662 RNU6-886P-201ENST00000384319 105 ntBASIC-1.09□□□□□ -2.58
CASP4P49662 RNU6-813P-201ENST00000384691 107 ntBASIC-1.09□□□□□ -2.58
CASP4P49662 SNORA40-201ENST00000388090 126 ntBASIC-1.09□□□□□ -2.58
CASP4P49662 RNU6-721P-201ENST00000410155 105 ntBASIC-1.09□□□□□ -2.58
CASP4P49662 AC104996.3-201ENST00000590718 94 ntBASIC-1.09□□□□□ -2.58
CASP4P49662 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.1□□□□□ -2.59
CASP4P49662 MIRLET7B-201ENST00000385140 83 ntBASIC-1.1□□□□□ -2.59
CASP4P49662 RNU6-592P-201ENST00000411333 103 ntBASIC-1.1□□□□□ -2.59
CASP4P49662 MIR3613-201ENST00000579844 87 ntBASIC-1.1□□□□□ -2.59
CASP4P49662 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.11□□□□□ -2.59
CASP4P49662 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.11□□□□□ -2.59
CASP4P49662 AC103810.7-201ENST00000607821 91 ntBASIC-1.11□□□□□ -2.59
CASP4P49662 SNORD115-23-201ENST00000364461 82 ntBASIC-1.12□□□□□ -2.59
CASP4P49662 SNORD114-15-201ENST00000364687 72 ntBASIC-1.12□□□□□ -2.59
CASP4P49662 RNY4P3-201ENST00000365254 95 ntBASIC-1.12□□□□□ -2.59
CASP4P49662 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.12□□□□□ -2.59
CASP4P49662 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.12□□□□□ -2.59
CASP4P49662 RNU7-24P-201ENST00000458867 62 ntBASIC-1.12□□□□□ -2.59
CASP4P49662 AC022137.1-201ENST00000483735 151 ntBASIC-1.12□□□□□ -2.59
CASP4P49662 MIR5009-201ENST00000578736 100 ntBASIC-1.12□□□□□ -2.59
CASP4P49662 MIR3140-201ENST00000583685 90 ntBASIC-1.12□□□□□ -2.59
CASP4P49662 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms