Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNA5SP292-201ENST00000390974 118 ntBASIC0.41□□□□□ -2.34
SOX2P48431 RNU6-848P-201ENST00000515948 107 ntBASIC0.41□□□□□ -2.34
SOX2P48431 RNU6-617P-201ENST00000516147 107 ntBASIC0.41□□□□□ -2.34
SOX2P48431 RNU6-473P-201ENST00000516164 107 ntBASIC0.41□□□□□ -2.34
SOX2P48431 RNU6-1049P-201ENST00000516414 107 ntBASIC0.41□□□□□ -2.34
SOX2P48431 SNORA18.5-201ENST00000516616 101 ntBASIC0.41□□□□□ -2.34
SOX2P48431 RNU6-1298P-201ENST00000362456 101 ntBASIC0.4□□□□□ -2.35
SOX2P48431 RNU6-633P-201ENST00000362612 103 ntBASIC0.4□□□□□ -2.35
SOX2P48431 Y_RNA.369-201ENST00000365568 117 ntBASIC0.4□□□□□ -2.35
SOX2P48431 SNORA2A-201ENST00000383885 135 ntBASIC0.4□□□□□ -2.35
SOX2P48431 MIR519C-201ENST00000385053 87 ntBASIC0.4□□□□□ -2.35
SOX2P48431 RNU6-402P-201ENST00000410678 103 ntBASIC0.4□□□□□ -2.35
SOX2P48431 Y_RNA.620-201ENST00000411009 88 ntBASIC0.4□□□□□ -2.35
SOX2P48431 AC006210.1-201ENST00000424882 111 ntBASIC0.4□□□□□ -2.35
SOX2P48431 AC093423.1-201ENST00000440817 142 ntBASIC0.4□□□□□ -2.35
SOX2P48431 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
SOX2P48431 NAMPTP3-201ENST00000569273 224 ntBASIC0.4□□□□□ -2.35
SOX2P48431 MIR5706-201ENST00000579841 80 ntBASIC0.4□□□□□ -2.35
SOX2P48431 AC243829.3-201ENST00000622177 108 ntBASIC0.4□□□□□ -2.35
SOX2P48431 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
SOX2P48431 U3.27-201ENST00000391237 200 ntBASIC0.39□□□□□ -2.35
SOX2P48431 MIR936-201ENST00000401264 98 ntBASIC0.39□□□□□ -2.35
SOX2P48431 SNORD110-201ENST00000408189 75 ntBASIC0.39□□□□□ -2.35
SOX2P48431 RNA5SP436-201ENST00000516020 115 ntBASIC0.39□□□□□ -2.35
SOX2P48431 MIR4460-201ENST00000577862 86 ntBASIC0.39□□□□□ -2.35
SOX2P48431 SNORA70.25-201ENST00000612741 95 ntBASIC0.39□□□□□ -2.35
SOX2P48431 MIR6755-201ENST00000619993 66 ntBASIC0.39□□□□□ -2.35
SOX2P48431 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
SOX2P48431 MIR103A1-201ENST00000362165 78 ntBASIC0.38□□□□□ -2.35
SOX2P48431 RNU6-219P-201ENST00000364728 107 ntBASIC0.38□□□□□ -2.35
SOX2P48431 RNU6-294P-201ENST00000364999 102 ntBASIC0.38□□□□□ -2.35
SOX2P48431 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
SOX2P48431 MIR4796-201ENST00000580742 81 ntBASIC0.38□□□□□ -2.35
SOX2P48431 U7.6-201ENST00000610841 64 ntBASIC0.38□□□□□ -2.35
SOX2P48431 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.38□□□□□ -2.35
SOX2P48431 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
SOX2P48431 Y_RNA.17-201ENST00000362433 111 ntBASIC0.37□□□□□ -2.35
SOX2P48431 Y_RNA.115-201ENST00000363272 98 ntBASIC0.37□□□□□ -2.35
SOX2P48431 SNORD115-27-201ENST00000364430 82 ntBASIC0.37□□□□□ -2.35
SOX2P48431 RNY4P3-201ENST00000365254 95 ntBASIC0.37□□□□□ -2.35
SOX2P48431 FGF7P7-201ENST00000514120 227 ntBASIC0.37□□□□□ -2.35
SOX2P48431 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
SOX2P48431 RNU1-29P-201ENST00000606574 126 ntBASIC0.37□□□□□ -2.35
SOX2P48431 MIR8087-201ENST00000612745 78 ntBASIC0.37□□□□□ -2.35
SOX2P48431 AC069503.3-201ENST00000618674 145 ntBASIC0.37□□□□□ -2.35
SOX2P48431 SNORA63.2-201ENST00000362603 126 ntBASIC0.36□□□□□ -2.35
SOX2P48431 SNORD115-37-201ENST00000363768 82 ntBASIC0.36□□□□□ -2.35
SOX2P48431 MIR760-201ENST00000390220 80 ntBASIC0.36□□□□□ -2.35
SOX2P48431 RNU6-267P-201ENST00000516714 103 ntBASIC0.36□□□□□ -2.35
SOX2P48431 RNU6-1051P-201ENST00000365471 102 ntBASIC0.35□□□□□ -2.35
SOX2P48431 Y_RNA.374-201ENST00000365606 101 ntBASIC0.35□□□□□ -2.35
SOX2P48431 RNU6-675P-201ENST00000384236 104 ntBASIC0.35□□□□□ -2.35
SOX2P48431 Y_RNA.558-201ENST00000384685 113 ntBASIC0.35□□□□□ -2.35
SOX2P48431 MT-TY-201ENST00000387409 66 ntBASIC0.35□□□□□ -2.35
SOX2P48431 MIR4711-201ENST00000578274 70 ntBASIC0.35□□□□□ -2.35
SOX2P48431 MIR330-201ENST00000362196 94 ntBASIC0.34□□□□□ -2.36
SOX2P48431 RNA5SP62-201ENST00000363457 110 ntBASIC0.34□□□□□ -2.36
SOX2P48431 Y_RNA.593-201ENST00000410292 98 ntBASIC0.34□□□□□ -2.36
SOX2P48431 RNU6-1052P-201ENST00000411398 104 ntBASIC0.34□□□□□ -2.36
SOX2P48431 AC073261.1-201ENST00000429409 121 ntBASIC0.34□□□□□ -2.36
SOX2P48431 RNU7-153P-201ENST00000516455 62 ntBASIC0.34□□□□□ -2.36
SOX2P48431 RNU6-719P-201ENST00000516671 104 ntBASIC0.34□□□□□ -2.36
SOX2P48431 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
SOX2P48431 IGLL4P-201ENST00000614590 133 ntBASIC0.34□□□□□ -2.36
SOX2P48431 MIR548O2-201ENST00000616090 70 ntBASIC0.34□□□□□ -2.36
SOX2P48431 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
SOX2P48431 RNA5SP128-201ENST00000365305 116 ntBASIC0.33□□□□□ -2.36
SOX2P48431 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
SOX2P48431 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.33□□□□□ -2.36
SOX2P48431 YWHAEP2-201ENST00000580066 112 ntBASIC0.33□□□□□ -2.36
SOX2P48431 SNORA9.1-201ENST00000362412 131 ntBASIC0.32□□□□□ -2.36
SOX2P48431 RNU5F-1-201ENST00000362507 117 ntBASIC0.32□□□□□ -2.36
SOX2P48431 Y_RNA.43-201ENST00000362670 111 ntBASIC0.32□□□□□ -2.36
SOX2P48431 RNU6-1255P-201ENST00000363434 112 ntBASIC0.32□□□□□ -2.36
SOX2P48431 RNY1P1-201ENST00000364372 112 ntBASIC0.32□□□□□ -2.36
SOX2P48431 AC093729.1-201ENST00000513074 128 ntBASIC0.32□□□□□ -2.36
SOX2P48431 RNU7-129P-201ENST00000516128 62 ntBASIC0.32□□□□□ -2.36
SOX2P48431 MIR3140-201ENST00000583685 90 ntBASIC0.32□□□□□ -2.36
SOX2P48431 AL109933.3-201ENST00000619095 188 ntBASIC0.32□□□□□ -2.36
SOX2P48431 MIR548BB-201ENST00000626714 66 ntBASIC0.32□□□□□ -2.36
SOX2P48431 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
SOX2P48431 RNU6V-201ENST00000384105 107 ntBASIC0.31□□□□□ -2.36
SOX2P48431 Y_RNA.611-201ENST00000410682 108 ntBASIC0.31□□□□□ -2.36
SOX2P48431 RNU6-1232P-201ENST00000516299 86 ntBASIC0.31□□□□□ -2.36
SOX2P48431 RNA5SP330-201ENST00000517096 96 ntBASIC0.31□□□□□ -2.36
SOX2P48431 RNU6-497P-201ENST00000365316 104 ntBASIC0.3□□□□□ -2.36
SOX2P48431 RNU6-815P-201ENST00000384080 113 ntBASIC0.3□□□□□ -2.36
SOX2P48431 SNORD90-201ENST00000391145 111 ntBASIC0.3□□□□□ -2.36
SOX2P48431 RNU5B-6P-201ENST00000516765 68 ntBASIC0.3□□□□□ -2.36
SOX2P48431 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.3□□□□□ -2.36
SOX2P48431 MIR4473-201ENST00000583731 91 ntBASIC0.3□□□□□ -2.36
SOX2P48431 AC006254.2-201ENST00000603259 279 ntBASIC0.3□□□□□ -2.36
SOX2P48431 Y_RNA.30-201ENST00000362572 97 ntBASIC0.29□□□□□ -2.36
SOX2P48431 RNA5SP257-201ENST00000363023 116 ntBASIC0.29□□□□□ -2.36
SOX2P48431 Y_RNA.125-201ENST00000363371 111 ntBASIC0.29□□□□□ -2.36
SOX2P48431 MIR450A2-201ENST00000385022 100 ntBASIC0.29□□□□□ -2.36
SOX2P48431 HMGN2P22-201ENST00000427588 175 ntBASIC0.29□□□□□ -2.36
SOX2P48431 SNORA25.13-201ENST00000516395 103 ntBASIC0.29□□□□□ -2.36
SOX2P48431 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SOX2P48431 AC069113.3-201ENST00000521019 150 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms