Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SNORD20-201ENST00000384550 80 ntBASIC0.18□□□□□ -2.38
NKX2-1P43699 MIR1197-201ENST00000408818 88 ntBASIC0.18□□□□□ -2.38
NKX2-1P43699 AL031737.1-201ENST00000450125 223 ntBASIC0.18□□□□□ -2.38
NKX2-1P43699 RNU7-85P-201ENST00000458851 63 ntBASIC0.18□□□□□ -2.38
NKX2-1P43699 RNU6-795P-201ENST00000516323 103 ntBASIC0.18□□□□□ -2.38
NKX2-1P43699 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.18□□□□□ -2.38
NKX2-1P43699 MIR499B-201ENST00000636498 73 ntBASIC0.18□□□□□ -2.38
NKX2-1P43699 SNORD116-10-201ENST00000363791 102 ntBASIC0.17□□□□□ -2.38
NKX2-1P43699 RNA5SP368-201ENST00000364298 116 ntBASIC0.17□□□□□ -2.38
NKX2-1P43699 SNORD101-201ENST00000384027 73 ntBASIC0.17□□□□□ -2.38
NKX2-1P43699 MIR329-2-201ENST00000385029 84 ntBASIC0.17□□□□□ -2.38
NKX2-1P43699 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
NKX2-1P43699 SNORD4B-201ENST00000459083 72 ntBASIC0.17□□□□□ -2.38
NKX2-1P43699 MIR4768-201ENST00000585270 74 ntBASIC0.17□□□□□ -2.38
NKX2-1P43699 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
NKX2-1P43699 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.17□□□□□ -2.38
NKX2-1P43699 Y_RNA.107-201ENST00000363190 121 ntBASIC0.16□□□□□ -2.38
NKX2-1P43699 Y_RNA.125-201ENST00000363371 111 ntBASIC0.16□□□□□ -2.38
NKX2-1P43699 MTATP8P2-201ENST00000435212 202 ntBASIC0.16□□□□□ -2.38
NKX2-1P43699 MIR4514-201ENST00000581410 57 ntBASIC0.16□□□□□ -2.38
NKX2-1P43699 MIR4536-1-201ENST00000583537 88 ntBASIC0.16□□□□□ -2.38
NKX2-1P43699 AC023932.2-201ENST00000603176 175 ntBASIC0.16□□□□□ -2.38
NKX2-1P43699 MIR106A-201ENST00000384870 81 ntBASIC0.15□□□□□ -2.39
NKX2-1P43699 MT-TY-201ENST00000387409 66 ntBASIC0.15□□□□□ -2.39
NKX2-1P43699 MIR760-201ENST00000390220 80 ntBASIC0.15□□□□□ -2.39
NKX2-1P43699 SNORD110-201ENST00000408189 75 ntBASIC0.15□□□□□ -2.39
NKX2-1P43699 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.15□□□□□ -2.39
NKX2-1P43699 RNA5SP484-201ENST00000458857 111 ntBASIC0.15□□□□□ -2.39
NKX2-1P43699 HAR1A.1-201ENST00000459583 118 ntBASIC0.15□□□□□ -2.39
NKX2-1P43699 Y_RNA.677-201ENST00000516401 85 ntBASIC0.15□□□□□ -2.39
NKX2-1P43699 RNU6-652P-201ENST00000365488 107 ntBASIC0.14□□□□□ -2.39
NKX2-1P43699 MIR501-201ENST00000390204 84 ntBASIC0.14□□□□□ -2.39
NKX2-1P43699 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
NKX2-1P43699 MIR892B-201ENST00000401279 77 ntBASIC0.14□□□□□ -2.39
NKX2-1P43699 MIR548H2-201ENST00000408874 88 ntBASIC0.14□□□□□ -2.39
NKX2-1P43699 RNU6-935P-201ENST00000410371 100 ntBASIC0.14□□□□□ -2.39
NKX2-1P43699 AL035461.1-201ENST00000421490 332 ntBASIC0.14□□□□□ -2.39
NKX2-1P43699 RNU6-65P-201ENST00000516332 98 ntBASIC0.14□□□□□ -2.39
NKX2-1P43699 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.14□□□□□ -2.39
NKX2-1P43699 Y_RNA.239-201ENST00000364444 113 ntBASIC0.13□□□□□ -2.39
NKX2-1P43699 RNY4P3-201ENST00000365254 95 ntBASIC0.13□□□□□ -2.39
NKX2-1P43699 MIR643-201ENST00000385267 97 ntBASIC0.13□□□□□ -2.39
NKX2-1P43699 AC006210.1-201ENST00000424882 111 ntBASIC0.13□□□□□ -2.39
NKX2-1P43699 HMGN2P22-201ENST00000427588 175 ntBASIC0.13□□□□□ -2.39
NKX2-1P43699 RNU6-109P-201ENST00000516364 107 ntBASIC0.13□□□□□ -2.39
NKX2-1P43699 SNORA25.13-201ENST00000516395 103 ntBASIC0.13□□□□□ -2.39
NKX2-1P43699 RNU6-184P-201ENST00000516514 107 ntBASIC0.13□□□□□ -2.39
NKX2-1P43699 MIR4677-201ENST00000584153 80 ntBASIC0.13□□□□□ -2.39
NKX2-1P43699 AP001318.4-201ENST00000616637 121 ntBASIC0.13□□□□□ -2.39
NKX2-1P43699 SNORD114-31-201ENST00000363219 75 ntBASIC0.12□□□□□ -2.39
NKX2-1P43699 RNU6-127P-201ENST00000390897 107 ntBASIC0.12□□□□□ -2.39
NKX2-1P43699 SNORD90-201ENST00000391145 111 ntBASIC0.12□□□□□ -2.39
NKX2-1P43699 NAMPTP3-201ENST00000569273 224 ntBASIC0.12□□□□□ -2.39
NKX2-1P43699 MIR5589-201ENST00000579442 60 ntBASIC0.12□□□□□ -2.39
NKX2-1P43699 MIR3925-201ENST00000584674 77 ntBASIC0.12□□□□□ -2.39
NKX2-1P43699 MIR548O2-201ENST00000616090 70 ntBASIC0.12□□□□□ -2.39
NKX2-1P43699 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
NKX2-1P43699 MIR548U-201ENST00000390728 81 ntBASIC0.11□□□□□ -2.39
NKX2-1P43699 MIR876-201ENST00000401147 81 ntBASIC0.11□□□□□ -2.39
NKX2-1P43699 MIR3681-201ENST00000580089 72 ntBASIC0.11□□□□□ -2.39
NKX2-1P43699 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.11□□□□□ -2.39
NKX2-1P43699 RNU6-1052P-201ENST00000411398 104 ntBASIC0.1□□□□□ -2.39
NKX2-1P43699 Z95118.1-201ENST00000421372 247 ntBASIC0.1□□□□□ -2.39
NKX2-1P43699 RNU7-129P-201ENST00000516128 62 ntBASIC0.1□□□□□ -2.39
NKX2-1P43699 RNU6-719P-201ENST00000516671 104 ntBASIC0.1□□□□□ -2.39
NKX2-1P43699 RNU5B-6P-201ENST00000516765 68 ntBASIC0.1□□□□□ -2.39
NKX2-1P43699 RNU6-1057P-201ENST00000517162 102 ntBASIC0.1□□□□□ -2.39
NKX2-1P43699 IGLVI-20-201ENST00000519296 130 ntBASIC0.1□□□□□ -2.39
NKX2-1P43699 MIR4460-201ENST00000577862 86 ntBASIC0.1□□□□□ -2.39
NKX2-1P43699 MIR548AE1-201ENST00000583292 70 ntBASIC0.1□□□□□ -2.39
NKX2-1P43699 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
NKX2-1P43699 Y_RNA.258-201ENST00000364613 105 ntBASIC0.09□□□□□ -2.4
NKX2-1P43699 MIR593-201ENST00000384856 100 ntBASIC0.09□□□□□ -2.4
NKX2-1P43699 RNU6-519P-201ENST00000410590 108 ntBASIC0.09□□□□□ -2.4
NKX2-1P43699 RNU7-61P-201ENST00000515897 61 ntBASIC0.09□□□□□ -2.4
NKX2-1P43699 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.09□□□□□ -2.4
NKX2-1P43699 SNORA40.13-201ENST00000516379 120 ntBASIC0.09□□□□□ -2.4
NKX2-1P43699 MIR4290-201ENST00000583807 95 ntBASIC0.09□□□□□ -2.4
NKX2-1P43699 AC104408.1-201ENST00000605241 170 ntBASIC0.09□□□□□ -2.4
NKX2-1P43699 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.09□□□□□ -2.4
NKX2-1P43699 SNORD114-5-201ENST00000362928 70 ntBASIC0.08□□□□□ -2.4
NKX2-1P43699 SNORD114-16-201ENST00000363044 70 ntBASIC0.08□□□□□ -2.4
NKX2-1P43699 RNU6-132P-201ENST00000383863 107 ntBASIC0.08□□□□□ -2.4
NKX2-1P43699 RNU6-147P-201ENST00000383983 107 ntBASIC0.08□□□□□ -2.4
NKX2-1P43699 MIR610-201ENST00000385139 96 ntBASIC0.08□□□□□ -2.4
NKX2-1P43699 RNU6-180P-201ENST00000516697 61 ntBASIC0.08□□□□□ -2.4
NKX2-1P43699 MIR3064-201ENST00000581130 66 ntBASIC0.08□□□□□ -2.4
NKX2-1P43699 U7.3-201ENST00000616123 62 ntBASIC0.08□□□□□ -2.4
NKX2-1P43699 MIRLET7F1-201ENST00000362202 87 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 Y_RNA.190-201ENST00000363964 101 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 Y_RNA.348-201ENST00000365403 103 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 RNU6-32P-201ENST00000383948 107 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 RNU6V-201ENST00000384105 107 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 RNU6-13P-201ENST00000384248 107 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 RNU6-12P-201ENST00000384604 107 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 RNU6-41P-201ENST00000384741 107 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 SNORA75.1-201ENST00000391130 148 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 RNU6-162P-201ENST00000516228 103 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 RNU6-758P-201ENST00000516292 89 ntBASIC0.07□□□□□ -2.4
NKX2-1P43699 MIR4636-201ENST00000582271 80 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms