Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.02□□□□□ -2.73
HTTP42858 RNU6-616P-201ENST00000384353 107 ntBASIC-2.02□□□□□ -2.73
HTTP42858 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.02□□□□□ -2.73
HTTP42858 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.02□□□□□ -2.73
HTTP42858 MT-TH-201ENST00000387441 69 ntBASIC-2.02□□□□□ -2.73
HTTP42858 AC018645.2-201ENST00000609151 472 ntBASIC-2.02□□□□□ -2.73
HTTP42858 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.02□□□□□ -2.73
HTTP42858 RNU5F-1-201ENST00000362507 117 ntBASIC-2.02□□□□□ -2.73
HTTP42858 RNU6-996P-201ENST00000365438 107 ntBASIC-2.02□□□□□ -2.73
HTTP42858 MIR630-201ENST00000384957 97 ntBASIC-2.02□□□□□ -2.73
HTTP42858 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.02□□□□□ -2.73
HTTP42858 DEFB117-201ENST00000602356 141 ntBASIC-2.02□□□□□ -2.73
HTTP42858 AC002553.4-201ENST00000616896 331 ntBASIC-2.02□□□□□ -2.73
HTTP42858 Y_RNA.813-201ENST00000364639 102 ntBASIC-2.03□□□□□ -2.73
HTTP42858 MTND1P1-201ENST00000445453 368 ntBASIC-2.03□□□□□ -2.73
HTTP42858 MTND2P39-201ENST00000457230 764 ntBASIC-2.03□□□□□ -2.73
HTTP42858 RNU7-63P-201ENST00000459054 62 ntBASIC-2.03□□□□□ -2.73
HTTP42858 SNORD63.2-201ENST00000516303 64 ntBASIC-2.03□□□□□ -2.73
HTTP42858 RNU6-1252P-201ENST00000363054 104 ntBASIC-2.03□□□□□ -2.73
HTTP42858 RNU6-409P-201ENST00000384114 104 ntBASIC-2.03□□□□□ -2.73
HTTP42858 RNU6-248P-201ENST00000410720 107 ntBASIC-2.03□□□□□ -2.73
HTTP42858 AC005899.2-201ENST00000584353 90 ntBASIC-2.03□□□□□ -2.73
HTTP42858 MIR759-201ENST00000390224 91 ntBASIC-2.04□□□□□ -2.74
HTTP42858 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.04□□□□□ -2.74
HTTP42858 RNU7-85P-201ENST00000458851 63 ntBASIC-2.04□□□□□ -2.74
HTTP42858 RNA5SP106-201ENST00000517274 100 ntBASIC-2.04□□□□□ -2.74
HTTP42858 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.04□□□□□ -2.74
HTTP42858 MIR579-201ENST00000385221 98 ntBASIC-2.04□□□□□ -2.74
HTTP42858 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.04□□□□□ -2.74
HTTP42858 RNY3P8-201ENST00000411366 126 ntBASIC-2.04□□□□□ -2.74
HTTP42858 RNU6-358P-201ENST00000516564 75 ntBASIC-2.04□□□□□ -2.74
HTTP42858 AL442128.1-201ENST00000615151 90 ntBASIC-2.04□□□□□ -2.74
HTTP42858 MIR7978-201ENST00000636158 59 ntBASIC-2.04□□□□□ -2.74
HTTP42858 MT-TI-201ENST00000387365 69 ntBASIC-2.05□□□□□ -2.74
HTTP42858 AC009161.1-201ENST00000417306 376 ntBASIC-2.05□□□□□ -2.74
HTTP42858 AC025166.1-201ENST00000612411 163 ntBASIC-2.05□□□□□ -2.74
HTTP42858 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.05□□□□□ -2.74
HTTP42858 Y_RNA.409-201ENST00000383990 98 ntBASIC-2.05□□□□□ -2.74
HTTP42858 SNORA40.3-201ENST00000390964 122 ntBASIC-2.05□□□□□ -2.74
HTTP42858 RNU6-1050P-201ENST00000410388 107 ntBASIC-2.05□□□□□ -2.74
HTTP42858 RNU6-1192P-201ENST00000612197 107 ntBASIC-2.05□□□□□ -2.74
HTTP42858 RNU6-489P-201ENST00000618289 107 ntBASIC-2.05□□□□□ -2.74
HTTP42858 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.06□□□□□ -2.74
HTTP42858 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.06□□□□□ -2.74
HTTP42858 SNORD116-16-201ENST00000384533 92 ntBASIC-2.06□□□□□ -2.74
HTTP42858 MIR4744-201ENST00000581563 82 ntBASIC-2.06□□□□□ -2.74
HTTP42858 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.06□□□□□ -2.74
HTTP42858 RNU4-43P-201ENST00000410628 137 ntBASIC-2.06□□□□□ -2.74
HTTP42858 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.06□□□□□ -2.74
HTTP42858 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.06□□□□□ -2.74
HTTP42858 AC107308.1-201ENST00000615897 301 ntBASIC-2.06□□□□□ -2.74
HTTP42858 MIR1255B1-201ENST00000636325 63 ntBASIC-2.06□□□□□ -2.74
HTTP42858 RNU6-822P-201ENST00000362707 106 ntBASIC-2.06□□□□□ -2.74
HTTP42858 AL157392.4-201ENST00000609756 345 ntBASIC-2.06□□□□□ -2.74
HTTP42858 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.07□□□□□ -2.74
HTTP42858 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.07□□□□□ -2.74
HTTP42858 Y_RNA.373-201ENST00000365600 103 ntBASIC-2.07□□□□□ -2.74
HTTP42858 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.07□□□□□ -2.74
HTTP42858 RNU6-89P-201ENST00000606519 100 ntBASIC-2.07□□□□□ -2.74
HTTP42858 snoU18.1-201ENST00000629629 71 ntBASIC-2.07□□□□□ -2.74
HTTP42858 RNU6-530P-201ENST00000391180 107 ntBASIC-2.07□□□□□ -2.74
HTTP42858 MTND2P30-201ENST00000456663 382 ntBASIC-2.07□□□□□ -2.74
HTTP42858 RNU6-240P-201ENST00000516098 97 ntBASIC-2.07□□□□□ -2.74
HTTP42858 MIR548V-201ENST00000584165 80 ntBASIC-2.07□□□□□ -2.74
HTTP42858 RNU6-363P-201ENST00000362895 105 ntBASIC-2.08□□□□□ -2.74
HTTP42858 RNU6-1016P-201ENST00000516689 94 ntBASIC-2.08□□□□□ -2.74
HTTP42858 AC090971.5-201ENST00000621102 293 ntBASIC-2.08□□□□□ -2.74
HTTP42858 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.08□□□□□ -2.74
HTTP42858 MTND4LP30-201ENST00000454092 297 ntBASIC-2.08□□□□□ -2.74
HTTP42858 MIR548AB-201ENST00000584917 84 ntBASIC-2.08□□□□□ -2.74
HTTP42858 RNU6-1090P-201ENST00000364065 94 ntBASIC-2.08□□□□□ -2.74
HTTP42858 SNORA17.4-201ENST00000391287 132 ntBASIC-2.08□□□□□ -2.74
HTTP42858 RNU7-66P-201ENST00000459469 62 ntBASIC-2.08□□□□□ -2.74
HTTP42858 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.08□□□□□ -2.74
HTTP42858 RNU7-174P-201ENST00000516248 59 ntBASIC-2.08□□□□□ -2.74
HTTP42858 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.08□□□□□ -2.74
HTTP42858 AP000240.1-201ENST00000609910 452 ntBASIC-2.08□□□□□ -2.74
HTTP42858 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.09□□□□□ -2.74
HTTP42858 MIR628-201ENST00000385229 95 ntBASIC-2.09□□□□□ -2.74
HTTP42858 RNU6-332P-201ENST00000391193 108 ntBASIC-2.09□□□□□ -2.74
HTTP42858 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.09□□□□□ -2.74
HTTP42858 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.09□□□□□ -2.74
HTTP42858 RNU6-276P-201ENST00000516114 96 ntBASIC-2.09□□□□□ -2.74
HTTP42858 RNU6-752P-201ENST00000516376 102 ntBASIC-2.09□□□□□ -2.74
HTTP42858 RNU6-764P-201ENST00000516396 105 ntBASIC-2.09□□□□□ -2.74
HTTP42858 U6.81-201ENST00000612550 106 ntBASIC-2.09□□□□□ -2.74
HTTP42858 RNU6-1059P-201ENST00000363752 98 ntBASIC-2.1□□□□□ -2.75
HTTP42858 RNU6-931P-201ENST00000363850 107 ntBASIC-2.1□□□□□ -2.75
HTTP42858 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.1□□□□□ -2.75
HTTP42858 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.1□□□□□ -2.75
HTTP42858 RNU6-1119P-201ENST00000384349 108 ntBASIC-2.1□□□□□ -2.75
HTTP42858 SNORA41B-201ENST00000384785 128 ntBASIC-2.1□□□□□ -2.75
HTTP42858 MIR1254-1-201ENST00000408257 97 ntBASIC-2.1□□□□□ -2.75
HTTP42858 SNORA20.3-201ENST00000516880 132 ntBASIC-2.1□□□□□ -2.75
HTTP42858 Y_RNA.152-201ENST00000363578 100 ntBASIC-2.11□□□□□ -2.75
HTTP42858 AL137067.1-201ENST00000615933 120 ntBASIC-2.11□□□□□ -2.75
HTTP42858 RNU6-668P-201ENST00000364180 107 ntBASIC-2.11□□□□□ -2.75
HTTP42858 RNU6-1158P-201ENST00000391167 107 ntBASIC-2.11□□□□□ -2.75
HTTP42858 Y_RNA.605-201ENST00000410577 105 ntBASIC-2.11□□□□□ -2.75
HTTP42858 Y_RNA.772-201ENST00000606692 102 ntBASIC-2.11□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms