Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 RNU6-337P-201ENST00000391243 106 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 RNU6-935P-201ENST00000410371 100 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 SNORA7.5-201ENST00000410672 110 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 RNU6-54P-201ENST00000365563 107 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 AC097510.1-201ENST00000510945 133 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 YWHAEP3-201ENST00000582767 121 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 AC145423.2-201ENST00000610631 239 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 RNU6-476P-201ENST00000384726 107 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 SNORD83B-201ENST00000386745 93 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 RNU7-197P-201ENST00000458836 62 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.9□□□□□ -2.55
BRCA1P38398 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 RNY1P11-201ENST00000363759 113 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 AL513043.2-201ENST00000573941 143 ntBASIC-0.91□□□□□ -2.56
BRCA1P38398 SNORD115-25-201ENST00000362619 82 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 RNU4-11P-201ENST00000365287 132 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 RNU7-24P-201ENST00000458867 62 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 RNU6-973P-201ENST00000364690 107 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 RNU6-915P-201ENST00000364943 103 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 MTATP6P29-201ENST00000415057 132 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 SNORD42B-201ENST00000458893 67 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 MIR6773-201ENST00000612812 74 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 AP001340.1-201ENST00000624405 217 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 SNORD114-25-201ENST00000363742 72 ntBASIC-0.93□□□□□ -2.56
BRCA1P38398 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.93□□□□□ -2.56
BRCA1P38398 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.93□□□□□ -2.56
BRCA1P38398 AC025521.1-201ENST00000621624 286 ntBASIC-0.93□□□□□ -2.56
BRCA1P38398 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.94□□□□□ -2.56
BRCA1P38398 RNU6-682P-201ENST00000363843 106 ntBASIC-0.94□□□□□ -2.56
BRCA1P38398 AC022137.1-201ENST00000483735 151 ntBASIC-0.94□□□□□ -2.56
BRCA1P38398 RNU6-762P-201ENST00000517107 102 ntBASIC-0.94□□□□□ -2.56
BRCA1P38398 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 snoU13.13-201ENST00000458842 104 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 AC025166.1-201ENST00000612411 163 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 RNU7-85P-201ENST00000458851 63 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 RNU4-32P-201ENST00000363404 141 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 RNU6-10P-201ENST00000384036 107 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 AL118496.2-201ENST00000448300 230 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 RNU7-120P-201ENST00000459334 63 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 MIR5704-201ENST00000584029 77 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 SNORA63.2-201ENST00000362603 126 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 RNU6-132P-201ENST00000383863 107 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 MIR517B-201ENST00000385102 67 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 AP001328.1-201ENST00000528550 176 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 RNU6-379P-201ENST00000363813 104 ntBASIC-0.97□□□□□ -2.57
BRCA1P38398 RNU6-574P-201ENST00000384265 107 ntBASIC-0.97□□□□□ -2.57
BRCA1P38398 SCARNA17-201ENST00000516183 144 ntBASIC-0.97□□□□□ -2.57
BRCA1P38398 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 RNU6-196P-201ENST00000384315 107 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 MIR548U-201ENST00000390728 81 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.98□□□□□ -2.57
BRCA1P38398 MIR3613-201ENST00000579844 87 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 AL353621.2-201ENST00000605340 133 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 U7.2-201ENST00000607576 63 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.99□□□□□ -2.57
BRCA1P38398 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.99□□□□□ -2.57
BRCA1P38398 RNU6-781P-201ENST00000516377 101 ntBASIC-0.99□□□□□ -2.57
BRCA1P38398 SNORD45B-201ENST00000364617 72 ntBASIC-1□□□□□ -2.57
BRCA1P38398 RNU6-80P-201ENST00000384195 107 ntBASIC-1□□□□□ -2.57
BRCA1P38398 RNA5SP192-201ENST00000364404 120 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 RNU6-816P-201ENST00000390914 107 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 CYP3A54P-201ENST00000566950 75 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 MIR3165-201ENST00000579874 75 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 SNORD4B-201ENST00000459083 72 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 AC068339.1-201ENST00000526965 141 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 MIR4679-2-201ENST00000578358 77 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 MIR6509-201ENST00000614603 85 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.02□□□□□ -2.57
BRCA1P38398 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.02□□□□□ -2.57
BRCA1P38398 MIR587-201ENST00000384845 96 ntBASIC-1.02□□□□□ -2.57
BRCA1P38398 RNU6-62P-201ENST00000516526 102 ntBASIC-1.02□□□□□ -2.57
BRCA1P38398 SNORD115-23-201ENST00000364461 82 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 SNORD114-3-201ENST00000364969 75 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 MIR582-201ENST00000365731 98 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 SNORD75.2-201ENST00000408784 58 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms