Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.99□□□□□ -2.57
FDFT1P37268 RNU6-463P-201ENST00000384340 107 ntBASIC-0.99□□□□□ -2.57
FDFT1P37268 SNORA13-201ENST00000458790 133 ntBASIC-0.99□□□□□ -2.57
FDFT1P37268 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.99□□□□□ -2.57
FDFT1P37268 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.99□□□□□ -2.57
FDFT1P37268 AC025521.1-201ENST00000621624 286 ntBASIC-0.99□□□□□ -2.57
FDFT1P37268 MTND5P18-201ENST00000445624 1801 ntBASIC-1□□□□□ -2.57
FDFT1P37268 Y_RNA.220-201ENST00000364244 109 ntBASIC-1□□□□□ -2.57
FDFT1P37268 RNU6-973P-201ENST00000364690 107 ntBASIC-1□□□□□ -2.57
FDFT1P37268 Y_RNA.377-201ENST00000365644 108 ntBASIC-1□□□□□ -2.57
FDFT1P37268 RNU6-1052P-201ENST00000411398 104 ntBASIC-1□□□□□ -2.57
FDFT1P37268 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1□□□□□ -2.57
FDFT1P37268 AC097510.1-201ENST00000510945 133 ntBASIC-1□□□□□ -2.57
FDFT1P37268 FGF7P7-201ENST00000514120 227 ntBASIC-1□□□□□ -2.57
FDFT1P37268 RNU6-75P-201ENST00000515944 104 ntBASIC-1□□□□□ -2.57
FDFT1P37268 RNU6-719P-201ENST00000516671 104 ntBASIC-1□□□□□ -2.57
FDFT1P37268 MIR4536-1-201ENST00000583537 88 ntBASIC-1□□□□□ -2.57
FDFT1P37268 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.01□□□□□ -2.57
FDFT1P37268 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.01□□□□□ -2.57
FDFT1P37268 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.01□□□□□ -2.57
FDFT1P37268 RNY1P7-201ENST00000384743 110 ntBASIC-1.01□□□□□ -2.57
FDFT1P37268 RNU6-394P-201ENST00000410735 107 ntBASIC-1.01□□□□□ -2.57
FDFT1P37268 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.02□□□□□ -2.57
FDFT1P37268 RNU6-379P-201ENST00000363813 104 ntBASIC-1.02□□□□□ -2.57
FDFT1P37268 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.02□□□□□ -2.57
FDFT1P37268 SNORD42B-201ENST00000458893 67 ntBASIC-1.02□□□□□ -2.57
FDFT1P37268 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.02□□□□□ -2.57
FDFT1P37268 AC004792.1-201ENST00000614523 137 ntBASIC-1.02□□□□□ -2.57
FDFT1P37268 RNU6-502P-201ENST00000362419 108 ntBASIC-1.03□□□□□ -2.57
FDFT1P37268 SNORD58C-201ENST00000365223 64 ntBASIC-1.03□□□□□ -2.57
FDFT1P37268 RNU6-804P-201ENST00000384286 107 ntBASIC-1.03□□□□□ -2.57
FDFT1P37268 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.03□□□□□ -2.57
FDFT1P37268 RNU6-476P-201ENST00000384726 107 ntBASIC-1.03□□□□□ -2.57
FDFT1P37268 MIR518B-201ENST00000385127 83 ntBASIC-1.03□□□□□ -2.57
FDFT1P37268 MIR577-201ENST00000385196 96 ntBASIC-1.03□□□□□ -2.57
FDFT1P37268 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.03□□□□□ -2.57
FDFT1P37268 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.03□□□□□ -2.57
FDFT1P37268 MIR5704-201ENST00000584029 77 ntBASIC-1.03□□□□□ -2.57
FDFT1P37268 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.04□□□□□ -2.58
FDFT1P37268 MIR196A1-201ENST00000388006 70 ntBASIC-1.04□□□□□ -2.58
FDFT1P37268 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.04□□□□□ -2.58
FDFT1P37268 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.04□□□□□ -2.58
FDFT1P37268 RNU6-388P-201ENST00000517012 105 ntBASIC-1.04□□□□□ -2.58
FDFT1P37268 RNU6-389P-201ENST00000517048 105 ntBASIC-1.04□□□□□ -2.58
FDFT1P37268 MIR3179-1-201ENST00000578940 84 ntBASIC-1.04□□□□□ -2.58
FDFT1P37268 MIR3179-2-201ENST00000579107 84 ntBASIC-1.04□□□□□ -2.58
FDFT1P37268 MIR3179-3-201ENST00000579566 84 ntBASIC-1.04□□□□□ -2.58
FDFT1P37268 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.04□□□□□ -2.58
FDFT1P37268 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.04□□□□□ -2.58
FDFT1P37268 MIR3179-4-201ENST00000617599 84 ntBASIC-1.04□□□□□ -2.58
FDFT1P37268 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.05□□□□□ -2.58
FDFT1P37268 SNORD50.2-201ENST00000365465 70 ntBASIC-1.05□□□□□ -2.58
FDFT1P37268 MIR569-201ENST00000385228 96 ntBASIC-1.05□□□□□ -2.58
FDFT1P37268 RNU6-881P-201ENST00000516813 102 ntBASIC-1.05□□□□□ -2.58
FDFT1P37268 RNY1P9-201ENST00000532431 109 ntBASIC-1.05□□□□□ -2.58
FDFT1P37268 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.06□□□□□ -2.58
FDFT1P37268 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.06□□□□□ -2.58
FDFT1P37268 MIR4694-201ENST00000578534 80 ntBASIC-1.06□□□□□ -2.58
FDFT1P37268 MIR3144-201ENST00000579460 79 ntBASIC-1.06□□□□□ -2.58
FDFT1P37268 snoR1.1-201ENST00000628177 80 ntBASIC-1.06□□□□□ -2.58
FDFT1P37268 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.07□□□□□ -2.58
FDFT1P37268 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.07□□□□□ -2.58
FDFT1P37268 RNA5SP266-201ENST00000410273 108 ntBASIC-1.07□□□□□ -2.58
FDFT1P37268 RNA5SP272-201ENST00000516095 111 ntBASIC-1.07□□□□□ -2.58
FDFT1P37268 SNORD22.1-201ENST00000516331 125 ntBASIC-1.07□□□□□ -2.58
FDFT1P37268 AL513043.2-201ENST00000573941 143 ntBASIC-1.07□□□□□ -2.58
FDFT1P37268 MIR6854-201ENST00000614935 69 ntBASIC-1.07□□□□□ -2.58
FDFT1P37268 RNU6-832P-201ENST00000363319 107 ntBASIC-1.08□□□□□ -2.58
FDFT1P37268 RNU6-721P-201ENST00000410155 105 ntBASIC-1.08□□□□□ -2.58
FDFT1P37268 RNU7-85P-201ENST00000458851 63 ntBASIC-1.08□□□□□ -2.58
FDFT1P37268 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
FDFT1P37268 SNORD57-201ENST00000448188 72 ntBASIC-1.09□□□□□ -2.58
FDFT1P37268 AL627230.5-201ENST00000619807 58 ntBASIC-1.09□□□□□ -2.58
FDFT1P37268 MIR548U-201ENST00000390728 81 ntBASIC-1.1□□□□□ -2.59
FDFT1P37268 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.1□□□□□ -2.59
FDFT1P37268 MIR6773-201ENST00000612812 74 ntBASIC-1.1□□□□□ -2.59
FDFT1P37268 RNY3P2-201ENST00000362918 102 ntBASIC-1.11□□□□□ -2.59
FDFT1P37268 SNORA63.6-201ENST00000364921 119 ntBASIC-1.11□□□□□ -2.59
FDFT1P37268 RNA5SP331-201ENST00000364986 107 ntBASIC-1.11□□□□□ -2.59
FDFT1P37268 RNU6-132P-201ENST00000383863 107 ntBASIC-1.11□□□□□ -2.59
FDFT1P37268 MIR8068-201ENST00000618032 68 ntBASIC-1.11□□□□□ -2.59
FDFT1P37268 AL035470.1-201ENST00000622571 220 ntBASIC-1.11□□□□□ -2.59
FDFT1P37268 SNORA63.2-201ENST00000362603 126 ntBASIC-1.12□□□□□ -2.59
FDFT1P37268 RNU4-36P-201ENST00000364294 144 ntBASIC-1.12□□□□□ -2.59
FDFT1P37268 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.12□□□□□ -2.59
FDFT1P37268 MIR587-201ENST00000384845 96 ntBASIC-1.12□□□□□ -2.59
FDFT1P37268 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.12□□□□□ -2.59
FDFT1P37268 AC022137.1-201ENST00000483735 151 ntBASIC-1.12□□□□□ -2.59
FDFT1P37268 RNU6-426P-201ENST00000516464 97 ntBASIC-1.12□□□□□ -2.59
FDFT1P37268 MIR517B-201ENST00000385102 67 ntBASIC-1.13□□□□□ -2.59
FDFT1P37268 AP000533.3-201ENST00000447704 118 ntBASIC-1.13□□□□□ -2.59
FDFT1P37268 SCARNA17-201ENST00000516183 144 ntBASIC-1.13□□□□□ -2.59
FDFT1P37268 MIR4679-2-201ENST00000578358 77 ntBASIC-1.13□□□□□ -2.59
FDFT1P37268 MIR3140-201ENST00000583685 90 ntBASIC-1.13□□□□□ -2.59
FDFT1P37268 MIR4439-201ENST00000583746 80 ntBASIC-1.13□□□□□ -2.59
FDFT1P37268 AL157777.2-201ENST00000258070 137 ntBASIC-1.14□□□□□ -2.59
FDFT1P37268 SNORD74.6-201ENST00000364796 70 ntBASIC-1.14□□□□□ -2.59
FDFT1P37268 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.14□□□□□ -2.59
FDFT1P37268 SNORD83B-201ENST00000386745 93 ntBASIC-1.14□□□□□ -2.59
FDFT1P37268 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms