Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 U3.27-201ENST00000391237 200 ntBASIC-0.18□□□□□ -2.44
HMGCLP35914 RNU6-175P-201ENST00000516896 107 ntBASIC-0.18□□□□□ -2.44
HMGCLP35914 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.18□□□□□ -2.44
HMGCLP35914 MIR6514-201ENST00000622549 70 ntBASIC-0.18□□□□□ -2.44
HMGCLP35914 SNORA18.1-201ENST00000363418 128 ntBASIC-0.19□□□□□ -2.44
HMGCLP35914 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.19□□□□□ -2.44
HMGCLP35914 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.19□□□□□ -2.44
HMGCLP35914 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.19□□□□□ -2.44
HMGCLP35914 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.19□□□□□ -2.44
HMGCLP35914 AL365222.1-201ENST00000614661 98 ntBASIC-0.19□□□□□ -2.44
HMGCLP35914 MIR655-201ENST00000362159 97 ntBASIC-0.2□□□□□ -2.44
HMGCLP35914 RNU4-36P-201ENST00000364294 144 ntBASIC-0.2□□□□□ -2.44
HMGCLP35914 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.2□□□□□ -2.44
HMGCLP35914 RNU7-188P-201ENST00000517063 64 ntBASIC-0.2□□□□□ -2.44
HMGCLP35914 MIR4473-201ENST00000583731 91 ntBASIC-0.2□□□□□ -2.44
HMGCLP35914 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.21□□□□□ -2.44
HMGCLP35914 RNU6-476P-201ENST00000384726 107 ntBASIC-0.21□□□□□ -2.44
HMGCLP35914 AC103810.7-201ENST00000607821 91 ntBASIC-0.21□□□□□ -2.44
HMGCLP35914 AC012531.4-201ENST00000616509 177 ntBASIC-0.21□□□□□ -2.44
HMGCLP35914 SNORD114-29-201ENST00000364819 70 ntBASIC-0.22□□□□□ -2.44
HMGCLP35914 RNU6-22P-201ENST00000384355 107 ntBASIC-0.22□□□□□ -2.44
HMGCLP35914 SNORD4B-201ENST00000459083 72 ntBASIC-0.22□□□□□ -2.44
HMGCLP35914 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.22□□□□□ -2.44
HMGCLP35914 MIR4536-1-201ENST00000583537 88 ntBASIC-0.22□□□□□ -2.44
HMGCLP35914 MIR548Z-201ENST00000584743 97 ntBASIC-0.22□□□□□ -2.44
HMGCLP35914 MIR6507-201ENST00000613630 70 ntBASIC-0.22□□□□□ -2.44
HMGCLP35914 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.23□□□□□ -2.45
HMGCLP35914 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.23□□□□□ -2.45
HMGCLP35914 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.23□□□□□ -2.45
HMGCLP35914 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
HMGCLP35914 SCARNA23-201ENST00000516060 130 ntBASIC-0.23□□□□□ -2.45
HMGCLP35914 RNU6-65P-201ENST00000516332 98 ntBASIC-0.23□□□□□ -2.45
HMGCLP35914 RNU6-479P-201ENST00000516348 105 ntBASIC-0.23□□□□□ -2.45
HMGCLP35914 RNU6-589P-201ENST00000516485 107 ntBASIC-0.23□□□□□ -2.45
HMGCLP35914 MIR3910-1-201ENST00000580936 111 ntBASIC-0.23□□□□□ -2.45
HMGCLP35914 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.24□□□□□ -2.45
HMGCLP35914 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.24□□□□□ -2.45
HMGCLP35914 RNU6-132P-201ENST00000383863 107 ntBASIC-0.24□□□□□ -2.45
HMGCLP35914 RNU6-154P-201ENST00000384306 106 ntBASIC-0.24□□□□□ -2.45
HMGCLP35914 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.24□□□□□ -2.45
HMGCLP35914 MIR451A-201ENST00000385059 72 ntBASIC-0.24□□□□□ -2.45
HMGCLP35914 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
HMGCLP35914 SNORA19.1-201ENST00000410656 129 ntBASIC-0.24□□□□□ -2.45
HMGCLP35914 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.24□□□□□ -2.45
HMGCLP35914 SNORA24B-201ENST00000384176 131 ntBASIC-0.25□□□□□ -2.45
HMGCLP35914 RNU6-106P-201ENST00000384405 107 ntBASIC-0.25□□□□□ -2.45
HMGCLP35914 MIR652-201ENST00000385278 98 ntBASIC-0.25□□□□□ -2.45
HMGCLP35914 AC244250.2-201ENST00000418731 148 ntBASIC-0.25□□□□□ -2.45
HMGCLP35914 AC244090.1-201ENST00000441884 93 ntBASIC-0.25□□□□□ -2.45
HMGCLP35914 RNU6-795P-201ENST00000516323 103 ntBASIC-0.25□□□□□ -2.45
HMGCLP35914 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.25□□□□□ -2.45
HMGCLP35914 MIR3064-201ENST00000581130 66 ntBASIC-0.25□□□□□ -2.45
HMGCLP35914 MIR20A-201ENST00000362279 71 ntBASIC-0.26□□□□□ -2.45
HMGCLP35914 SNORD58A-201ENST00000383875 65 ntBASIC-0.26□□□□□ -2.45
HMGCLP35914 RNU6-972P-201ENST00000391208 107 ntBASIC-0.26□□□□□ -2.45
HMGCLP35914 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.26□□□□□ -2.45
HMGCLP35914 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.26□□□□□ -2.45
HMGCLP35914 MIR8064-201ENST00000612863 90 ntBASIC-0.26□□□□□ -2.45
HMGCLP35914 AC132825.6-201ENST00000638861 357 ntBASIC-0.26□□□□□ -2.45
HMGCLP35914 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.27□□□□□ -2.45
HMGCLP35914 RNU6-811P-201ENST00000384069 107 ntBASIC-0.27□□□□□ -2.45
HMGCLP35914 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.27□□□□□ -2.45
HMGCLP35914 MIR3666-201ENST00000607845 111 ntBASIC-0.27□□□□□ -2.45
HMGCLP35914 SNORA63.2-201ENST00000362603 126 ntBASIC-0.28□□□□□ -2.45
HMGCLP35914 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.28□□□□□ -2.45
HMGCLP35914 RNU6-554P-201ENST00000410466 106 ntBASIC-0.28□□□□□ -2.45
HMGCLP35914 RNU6-887P-201ENST00000410660 100 ntBASIC-0.28□□□□□ -2.45
HMGCLP35914 RNU6-62P-201ENST00000516526 102 ntBASIC-0.28□□□□□ -2.45
HMGCLP35914 MIR5589-201ENST00000579442 60 ntBASIC-0.28□□□□□ -2.45
HMGCLP35914 MIR4645-201ENST00000583158 77 ntBASIC-0.28□□□□□ -2.45
HMGCLP35914 AC104996.3-201ENST00000590718 94 ntBASIC-0.28□□□□□ -2.45
HMGCLP35914 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.28□□□□□ -2.45
HMGCLP35914 MIR6759-201ENST00000638110 65 ntBASIC-0.28□□□□□ -2.45
HMGCLP35914 SNORD49B-201ENST00000365172 72 ntBASIC-0.29□□□□□ -2.46
HMGCLP35914 RNU6-54P-201ENST00000365563 107 ntBASIC-0.29□□□□□ -2.46
HMGCLP35914 SNORA49-201ENST00000386157 136 ntBASIC-0.29□□□□□ -2.46
HMGCLP35914 MIR548U-201ENST00000390728 81 ntBASIC-0.29□□□□□ -2.46
HMGCLP35914 MIR1302-5-201ENST00000408164 150 ntBASIC-0.29□□□□□ -2.46
HMGCLP35914 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.29□□□□□ -2.46
HMGCLP35914 AC145423.2-201ENST00000610631 239 ntBASIC-0.29□□□□□ -2.46
HMGCLP35914 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.3□□□□□ -2.46
HMGCLP35914 MIR590-201ENST00000385008 97 ntBASIC-0.3□□□□□ -2.46
HMGCLP35914 RNU6-158P-201ENST00000517104 100 ntBASIC-0.3□□□□□ -2.46
HMGCLP35914 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.31□□□□□ -2.46
HMGCLP35914 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.31□□□□□ -2.46
HMGCLP35914 RNA5SP300-201ENST00000391197 107 ntBASIC-0.31□□□□□ -2.46
HMGCLP35914 MIR1265-201ENST00000408444 86 ntBASIC-0.31□□□□□ -2.46
HMGCLP35914 SNORD42B-201ENST00000458893 67 ntBASIC-0.31□□□□□ -2.46
HMGCLP35914 AL590491.3-201ENST00000610731 82 ntBASIC-0.31□□□□□ -2.46
HMGCLP35914 MIR6129-201ENST00000616087 109 ntBASIC-0.31□□□□□ -2.46
HMGCLP35914 RNU6-495P-201ENST00000362995 107 ntBASIC-0.32□□□□□ -2.46
HMGCLP35914 SNORD114-28-201ENST00000363610 72 ntBASIC-0.32□□□□□ -2.46
HMGCLP35914 SNORD116-10-201ENST00000363791 102 ntBASIC-0.32□□□□□ -2.46
HMGCLP35914 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.32□□□□□ -2.46
HMGCLP35914 AL603908.1-201ENST00000406098 201 ntBASIC-0.32□□□□□ -2.46
HMGCLP35914 RNU6-519P-201ENST00000410590 108 ntBASIC-0.32□□□□□ -2.46
HMGCLP35914 RNU7-24P-201ENST00000458867 62 ntBASIC-0.32□□□□□ -2.46
HMGCLP35914 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.32□□□□□ -2.46
HMGCLP35914 SNORD114-4-201ENST00000363962 75 ntBASIC-0.33□□□□□ -2.46
HMGCLP35914 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms