Protein–RNA interactions for Protein: P35498

SCN1A, Sodium channel protein type 1 subunit alpha, humanhuman

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1AP35498 SNORD45B-201ENST00000364617 72 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 RNA5SP205-201ENST00000364653 136 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 RNU6-804P-201ENST00000384286 107 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 RNU6-816P-201ENST00000390914 107 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 RNA5SP451-201ENST00000410588 110 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 AC093726.3-201ENST00000637588 150 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.49□□□□□ -2.49
SCN1AP35498 SNORA40-201ENST00000388090 126 ntBASIC-0.49□□□□□ -2.49
SCN1AP35498 RNU6-284P-201ENST00000411105 106 ntBASIC-0.49□□□□□ -2.49
SCN1AP35498 MTATP6P29-201ENST00000415057 132 ntBASIC-0.49□□□□□ -2.49
SCN1AP35498 AC244090.1-201ENST00000441884 93 ntBASIC-0.49□□□□□ -2.49
SCN1AP35498 AL590491.3-201ENST00000610731 82 ntBASIC-0.49□□□□□ -2.49
SCN1AP35498 MIR6507-201ENST00000613630 70 ntBASIC-0.49□□□□□ -2.49
SCN1AP35498 SNORD50.2-201ENST00000365465 70 ntBASIC-0.5□□□□□ -2.49
SCN1AP35498 snosnR66.1-201ENST00000391095 99 ntBASIC-0.5□□□□□ -2.49
SCN1AP35498 RNU7-200P-201ENST00000516105 62 ntBASIC-0.5□□□□□ -2.49
SCN1AP35498 MIR3613-201ENST00000579844 87 ntBASIC-0.5□□□□□ -2.49
SCN1AP35498 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.5□□□□□ -2.49
SCN1AP35498 RNU4-36P-201ENST00000364294 144 ntBASIC-0.5□□□□□ -2.49
SCN1AP35498 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.5□□□□□ -2.49
SCN1AP35498 MIR655-201ENST00000362159 97 ntBASIC-0.51□□□□□ -2.49
SCN1AP35498 MIR548U-201ENST00000390728 81 ntBASIC-0.51□□□□□ -2.49
SCN1AP35498 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.52□□□□□ -2.49
SCN1AP35498 MIR9-2-201ENST00000384838 87 ntBASIC-0.52□□□□□ -2.49
SCN1AP35498 MIRLET7B-201ENST00000385140 83 ntBASIC-0.52□□□□□ -2.49
SCN1AP35498 RNU4-63P-201ENST00000411313 118 ntBASIC-0.52□□□□□ -2.49
SCN1AP35498 uc_338.36-201ENST00000622331 158 ntBASIC-0.52□□□□□ -2.49
SCN1AP35498 MIR652-201ENST00000385278 98 ntBASIC-0.52□□□□□ -2.49
SCN1AP35498 RNY3P2-201ENST00000362918 102 ntBASIC-0.53□□□□□ -2.49
SCN1AP35498 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.53□□□□□ -2.49
SCN1AP35498 MIR548E-201ENST00000408287 88 ntBASIC-0.53□□□□□ -2.49
SCN1AP35498 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.53□□□□□ -2.49
SCN1AP35498 SNORD33.1-201ENST00000516213 88 ntBASIC-0.53□□□□□ -2.49
SCN1AP35498 RNU6-412P-201ENST00000516434 106 ntBASIC-0.53□□□□□ -2.49
SCN1AP35498 MIR409-201ENST00000362237 79 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 RNU7-85P-201ENST00000458851 63 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 SNORA63.2-201ENST00000362603 126 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 RNA5SP66-201ENST00000517178 101 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 MIR5009-201ENST00000578736 100 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 MIR8064-201ENST00000612863 90 ntBASIC-0.54□□□□□ -2.5
SCN1AP35498 RNU6-495P-201ENST00000362995 107 ntBASIC-0.55□□□□□ -2.5
SCN1AP35498 MIR6854-201ENST00000614935 69 ntBASIC-0.55□□□□□ -2.5
SCN1AP35498 MIR548O2-201ENST00000616090 70 ntBASIC-0.55□□□□□ -2.5
SCN1AP35498 RNU6-132P-201ENST00000383863 107 ntBASIC-0.55□□□□□ -2.5
SCN1AP35498 MIR569-201ENST00000385228 96 ntBASIC-0.55□□□□□ -2.5
SCN1AP35498 RNU6-257P-201ENST00000410238 98 ntBASIC-0.55□□□□□ -2.5
SCN1AP35498 MIR4694-201ENST00000578534 80 ntBASIC-0.55□□□□□ -2.5
SCN1AP35498 RNU6-86P-201ENST00000606534 107 ntBASIC-0.55□□□□□ -2.5
SCN1AP35498 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.56□□□□□ -2.5
SCN1AP35498 SNORA3B-201ENST00000391305 131 ntBASIC-0.56□□□□□ -2.5
SCN1AP35498 RNU7-24P-201ENST00000458867 62 ntBASIC-0.56□□□□□ -2.5
SCN1AP35498 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.56□□□□□ -2.5
SCN1AP35498 MIR6851-201ENST00000617060 67 ntBASIC-0.56□□□□□ -2.5
SCN1AP35498 RNU6-900P-201ENST00000384498 102 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 U3.27-201ENST00000391237 200 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 RNA5SP266-201ENST00000410273 108 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 AC097510.1-201ENST00000510945 133 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 RNU6-62P-201ENST00000516526 102 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 MIR4280-201ENST00000582178 76 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 MIR4439-201ENST00000583746 80 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 RNU6-54P-201ENST00000365563 107 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 RNU6-886P-201ENST00000384319 105 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 AL078595.1-201ENST00000404458 226 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 RNU7-107P-201ENST00000459121 61 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 SNORD18.2-201ENST00000459604 70 ntBASIC-0.57□□□□□ -2.5
SCN1AP35498 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.58□□□□□ -2.5
SCN1AP35498 MIR196A1-201ENST00000388006 70 ntBASIC-0.58□□□□□ -2.5
SCN1AP35498 SNORA13-201ENST00000458790 133 ntBASIC-0.58□□□□□ -2.5
SCN1AP35498 RNU7-61P-201ENST00000515897 61 ntBASIC-0.58□□□□□ -2.5
SCN1AP35498 RNU6-971P-201ENST00000516920 106 ntBASIC-0.58□□□□□ -2.5
SCN1AP35498 RNU6-502P-201ENST00000362419 108 ntBASIC-0.59□□□□□ -2.5
SCN1AP35498 MIR548A3-201ENST00000385297 97 ntBASIC-0.59□□□□□ -2.5
SCN1AP35498 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.59□□□□□ -2.5
SCN1AP35498 RNU6-794P-201ENST00000517261 64 ntBASIC-0.59□□□□□ -2.5
SCN1AP35498 SNORD4B-201ENST00000459083 72 ntBASIC-0.59□□□□□ -2.5
SCN1AP35498 SNORA40.17-201ENST00000517256 115 ntBASIC-0.59□□□□□ -2.5
SCN1AP35498 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.6□□□□□ -2.51
SCN1AP35498 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.6□□□□□ -2.51
SCN1AP35498 RNU6-905P-201ENST00000384434 107 ntBASIC-0.6□□□□□ -2.51
SCN1AP35498 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.6□□□□□ -2.51
SCN1AP35498 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
SCN1AP35498 RNU7-55P-201ENST00000459426 62 ntBASIC-0.6□□□□□ -2.51
SCN1AP35498 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.6□□□□□ -2.51
SCN1AP35498 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.6□□□□□ -2.51
SCN1AP35498 RNU6-209P-201ENST00000384118 107 ntBASIC-0.6□□□□□ -2.51
SCN1AP35498 SNORD75.1-201ENST00000408373 60 ntBASIC-0.6□□□□□ -2.51
SCN1AP35498 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.6□□□□□ -2.51
SCN1AP35498 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.6□□□□□ -2.51
SCN1AP35498 SNORD22.1-201ENST00000516331 125 ntBASIC-0.6□□□□□ -2.51
SCN1AP35498 RNU6-762P-201ENST00000517107 102 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms