Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MIR100-201ENST00000385259 80 ntBASIC0.8□□□□□ -2.28
HOXC13P31276 RNU6-303P-201ENST00000517091 106 ntBASIC0.8□□□□□ -2.28
HOXC13P31276 YWHAEP2-201ENST00000580066 112 ntBASIC0.8□□□□□ -2.28
HOXC13P31276 YWHAEP3-201ENST00000582767 121 ntBASIC0.8□□□□□ -2.28
HOXC13P31276 MIR4676-201ENST00000583078 72 ntBASIC0.8□□□□□ -2.28
HOXC13P31276 AL353765.1-201ENST00000605514 183 ntBASIC0.8□□□□□ -2.28
HOXC13P31276 Y_RNA.42-201ENST00000362660 108 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 SNORA8.1-201ENST00000384250 140 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 RPS26P5-201ENST00000418544 335 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 AC098934.3-201ENST00000430450 190 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 RNU6-687P-201ENST00000516443 89 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 RNU6-1110P-201ENST00000516462 101 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 RNU6-765P-201ENST00000516916 99 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 AC138907.6-201ENST00000568401 126 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 AC138869.1-201ENST00000568623 124 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 MIR1273G-201ENST00000577677 100 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 MIR1297-201ENST00000637311 77 ntBASIC0.79□□□□□ -2.28
HOXC13P31276 RNU5F-1-201ENST00000362507 117 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 RNU6-291P-201ENST00000384720 107 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 MIR519A1-201ENST00000385257 85 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
HOXC13P31276 Y_RNA.596-201ENST00000410462 109 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 AC074348.1-201ENST00000426503 132 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 AC097635.1-201ENST00000450678 155 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 RNU7-102P-201ENST00000458948 62 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 RNU6-871P-201ENST00000516122 100 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 RNA5SP330-201ENST00000517096 96 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 AC008608.1-201ENST00000603910 127 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
HOXC13P31276 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
HOXC13P31276 Y_RNA.115-201ENST00000363272 98 ntBASIC0.77□□□□□ -2.29
HOXC13P31276 RNA5SP499-201ENST00000363982 119 ntBASIC0.77□□□□□ -2.29
HOXC13P31276 RNU6-340P-201ENST00000364005 107 ntBASIC0.77□□□□□ -2.29
HOXC13P31276 RNU6-154P-201ENST00000384306 106 ntBASIC0.77□□□□□ -2.29
HOXC13P31276 RNU6-1241P-201ENST00000384536 107 ntBASIC0.77□□□□□ -2.29
HOXC13P31276 MIR451A-201ENST00000385059 72 ntBASIC0.77□□□□□ -2.29
HOXC13P31276 MIR154-201ENST00000385243 84 ntBASIC0.77□□□□□ -2.29
HOXC13P31276 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
HOXC13P31276 RNU6-587P-201ENST00000391282 106 ntBASIC0.77□□□□□ -2.29
HOXC13P31276 MIR938-201ENST00000401216 83 ntBASIC0.77□□□□□ -2.29
HOXC13P31276 RNU6-977P-201ENST00000516411 103 ntBASIC0.77□□□□□ -2.29
HOXC13P31276 RNU6-369P-201ENST00000362515 102 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 RNU6-590P-201ENST00000365039 107 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 RNY4P3-201ENST00000365254 95 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 SNORD115-31-201ENST00000365318 82 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 Y_RNA.340-201ENST00000365330 92 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 RNU6-649P-201ENST00000384463 107 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 RNU6-540P-201ENST00000384622 101 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 SNORD30.1-201ENST00000391309 70 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 MIR2113-201ENST00000459007 91 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 RNU6-539P-201ENST00000516665 103 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 MIR4804-201ENST00000581683 73 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
HOXC13P31276 RNU6-824P-201ENST00000363724 104 ntBASIC0.75□□□□□ -2.29
HOXC13P31276 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
HOXC13P31276 RNU6-935P-201ENST00000410371 100 ntBASIC0.75□□□□□ -2.29
HOXC13P31276 RNU7-56P-201ENST00000458744 62 ntBASIC0.75□□□□□ -2.29
HOXC13P31276 RNU6-634P-201ENST00000459134 106 ntBASIC0.75□□□□□ -2.29
HOXC13P31276 RNU6-287P-201ENST00000516230 98 ntBASIC0.75□□□□□ -2.29
HOXC13P31276 MTRNR2L2-201ENST00000604882 87 ntBASIC0.75□□□□□ -2.29
HOXC13P31276 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.75□□□□□ -2.29
HOXC13P31276 MIR1-1-201ENST00000362147 71 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 RNU6-1335P-201ENST00000365426 107 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 MIR520F-201ENST00000384824 87 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 RNU1-119P-201ENST00000391122 165 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 SNORD99-201ENST00000408612 74 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 AC125388.1-201ENST00000459631 156 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 AC097510.1-201ENST00000510945 133 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 RNU6-1265P-201ENST00000516342 103 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 RNA5SP121-201ENST00000516537 101 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 SNORA31.14-201ENST00000516728 116 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 RNU6-1057P-201ENST00000517162 102 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 MIR4773-1-201ENST00000637203 78 ntBASIC0.74□□□□□ -2.29
HOXC13P31276 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
HOXC13P31276 Y_RNA.32-201ENST00000362589 110 ntBASIC0.73□□□□□ -2.29
HOXC13P31276 SNORD45.1-201ENST00000363181 77 ntBASIC0.73□□□□□ -2.29
HOXC13P31276 SNORD115-24-201ENST00000363528 82 ntBASIC0.73□□□□□ -2.29
HOXC13P31276 RNU6-681P-201ENST00000364012 104 ntBASIC0.73□□□□□ -2.29
HOXC13P31276 SNORA24B-201ENST00000384176 131 ntBASIC0.73□□□□□ -2.29
HOXC13P31276 RNU6-663P-201ENST00000391105 106 ntBASIC0.73□□□□□ -2.29
HOXC13P31276 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.73□□□□□ -2.29
HOXC13P31276 MIR4711-201ENST00000578274 70 ntBASIC0.73□□□□□ -2.29
HOXC13P31276 MIR3675-201ENST00000583661 73 ntBASIC0.73□□□□□ -2.29
HOXC13P31276 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.73□□□□□ -2.29
HOXC13P31276 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
HOXC13P31276 RNU6-382P-201ENST00000365181 106 ntBASIC0.72□□□□□ -2.29
HOXC13P31276 SNORD45A-201ENST00000384512 84 ntBASIC0.72□□□□□ -2.29
HOXC13P31276 RNU6-1177P-201ENST00000391058 104 ntBASIC0.72□□□□□ -2.29
HOXC13P31276 Y_RNA.606-201ENST00000410579 103 ntBASIC0.72□□□□□ -2.29
HOXC13P31276 AC244505.6-201ENST00000452829 130 ntBASIC0.72□□□□□ -2.29
HOXC13P31276 RNU7-13P-201ENST00000516413 62 ntBASIC0.72□□□□□ -2.29
HOXC13P31276 U6.81-201ENST00000612550 106 ntBASIC0.72□□□□□ -2.29
HOXC13P31276 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
HOXC13P31276 Y_RNA.386-201ENST00000383913 105 ntBASIC0.71□□□□□ -2.3
HOXC13P31276 RNU6-800P-201ENST00000384473 103 ntBASIC0.71□□□□□ -2.3
HOXC13P31276 RNU2-59P-201ENST00000410482 191 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 396.7 ms