Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL591704.2-201ENST00000421658 181 ntBASIC1.64□□□□□ -2.15
RXRBP28702 SNORD115-22-201ENST00000364456 82 ntBASIC1.63□□□□□ -2.15
RXRBP28702 RNU6-364P-201ENST00000384387 107 ntBASIC1.63□□□□□ -2.15
RXRBP28702 SNORD79.1-201ENST00000516069 84 ntBASIC1.63□□□□□ -2.15
RXRBP28702 MIR548AG2-201ENST00000581228 64 ntBASIC1.63□□□□□ -2.15
RXRBP28702 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.63□□□□□ -2.15
RXRBP28702 uc_338.16-201ENST00000621804 95 ntBASIC1.63□□□□□ -2.15
RXRBP28702 Y_RNA.32-201ENST00000362589 110 ntBASIC1.62□□□□□ -2.15
RXRBP28702 RNU6-681P-201ENST00000364012 104 ntBASIC1.62□□□□□ -2.15
RXRBP28702 SNORD45A-201ENST00000384512 84 ntBASIC1.62□□□□□ -2.15
RXRBP28702 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RXRBP28702 RNU6-910P-201ENST00000390844 107 ntBASIC1.62□□□□□ -2.15
RXRBP28702 SNORA31.14-201ENST00000516728 116 ntBASIC1.62□□□□□ -2.15
RXRBP28702 CYP3A137P-201ENST00000562436 69 ntBASIC1.62□□□□□ -2.15
RXRBP28702 SNORA80D-201ENST00000384488 135 ntBASIC1.61□□□□□ -2.15
RXRBP28702 RNU6-1177P-201ENST00000391058 104 ntBASIC1.61□□□□□ -2.15
RXRBP28702 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.61□□□□□ -2.15
RXRBP28702 AC005520.4-201ENST00000604337 90 ntBASIC1.61□□□□□ -2.15
RXRBP28702 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.61□□□□□ -2.15
RXRBP28702 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
RXRBP28702 RNA5SP403-201ENST00000363598 108 ntBASIC1.6□□□□□ -2.15
RXRBP28702 RNU6-471P-201ENST00000383944 106 ntBASIC1.6□□□□□ -2.15
RXRBP28702 RNU7-161P-201ENST00000517289 62 ntBASIC1.6□□□□□ -2.15
RXRBP28702 RNU6-382P-201ENST00000365181 106 ntBASIC1.59□□□□□ -2.15
RXRBP28702 SNORD116-24-201ENST00000384549 92 ntBASIC1.59□□□□□ -2.15
RXRBP28702 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
RXRBP28702 U3.27-201ENST00000391237 200 ntBASIC1.59□□□□□ -2.15
RXRBP28702 RNU7-90P-201ENST00000459216 62 ntBASIC1.59□□□□□ -2.15
RXRBP28702 RNU6-1126P-201ENST00000384002 107 ntBASIC1.58□□□□□ -2.16
RXRBP28702 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
RXRBP28702 RNU6-977P-201ENST00000516411 103 ntBASIC1.58□□□□□ -2.16
RXRBP28702 MIR3920-201ENST00000581751 86 ntBASIC1.58□□□□□ -2.16
RXRBP28702 SNORD45.1-201ENST00000363181 77 ntBASIC1.57□□□□□ -2.16
RXRBP28702 SNORD115-44-201ENST00000365391 82 ntBASIC1.57□□□□□ -2.16
RXRBP28702 RNU6-35P-201ENST00000384530 107 ntBASIC1.56□□□□□ -2.16
RXRBP28702 SNORD12-201ENST00000391002 90 ntBASIC1.56□□□□□ -2.16
RXRBP28702 RNU1-119P-201ENST00000391122 165 ntBASIC1.56□□□□□ -2.16
RXRBP28702 MIR1827-201ENST00000408549 66 ntBASIC1.56□□□□□ -2.16
RXRBP28702 MIR7974-201ENST00000615835 79 ntBASIC1.56□□□□□ -2.16
RXRBP28702 MIR100-201ENST00000385259 80 ntBASIC1.55□□□□□ -2.16
RXRBP28702 RNU6-994P-201ENST00000410507 111 ntBASIC1.55□□□□□ -2.16
RXRBP28702 MIR4773-1-201ENST00000637203 78 ntBASIC1.55□□□□□ -2.16
RXRBP28702 SNORD115-24-201ENST00000363528 82 ntBASIC1.54□□□□□ -2.16
RXRBP28702 MIR520F-201ENST00000384824 87 ntBASIC1.54□□□□□ -2.16
RXRBP28702 RNU6-604P-201ENST00000390917 100 ntBASIC1.54□□□□□ -2.16
RXRBP28702 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.54□□□□□ -2.16
RXRBP28702 RNU7-13P-201ENST00000516413 62 ntBASIC1.54□□□□□ -2.16
RXRBP28702 RNU6-881P-201ENST00000516813 102 ntBASIC1.54□□□□□ -2.16
RXRBP28702 MIR1-1-201ENST00000362147 71 ntBASIC1.53□□□□□ -2.16
RXRBP28702 SNORD113.1-201ENST00000363280 73 ntBASIC1.53□□□□□ -2.16
RXRBP28702 RNU6-630P-201ENST00000391258 106 ntBASIC1.53□□□□□ -2.16
RXRBP28702 RNU6-1057P-201ENST00000517162 102 ntBASIC1.53□□□□□ -2.16
RXRBP28702 MIR8053-201ENST00000613344 75 ntBASIC1.53□□□□□ -2.16
RXRBP28702 RNU6-495P-201ENST00000362995 107 ntBASIC1.52□□□□□ -2.17
RXRBP28702 Y_RNA.443-201ENST00000384135 111 ntBASIC1.52□□□□□ -2.17
RXRBP28702 RNU6-752P-201ENST00000516376 102 ntBASIC1.52□□□□□ -2.17
RXRBP28702 AC010487.4-201ENST00000637027 61 ntBASIC1.52□□□□□ -2.17
RXRBP28702 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RXRBP28702 Y_RNA.174-201ENST00000363781 105 ntBASIC1.51□□□□□ -2.17
RXRBP28702 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.51□□□□□ -2.17
RXRBP28702 SNORD75.2-201ENST00000408784 58 ntBASIC1.51□□□□□ -2.17
RXRBP28702 AC244098.3-201ENST00000424803 96 ntBASIC1.51□□□□□ -2.17
RXRBP28702 AC002429.1-201ENST00000437672 148 ntBASIC1.51□□□□□ -2.17
RXRBP28702 RNU7-24P-201ENST00000458867 62 ntBASIC1.51□□□□□ -2.17
RXRBP28702 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.51□□□□□ -2.17
RXRBP28702 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
RXRBP28702 SNORD114-23-201ENST00000363536 72 ntBASIC1.5□□□□□ -2.17
RXRBP28702 MIR9-2-201ENST00000384838 87 ntBASIC1.5□□□□□ -2.17
RXRBP28702 MIR617-201ENST00000385030 97 ntBASIC1.5□□□□□ -2.17
RXRBP28702 MIR519E-201ENST00000385075 84 ntBASIC1.5□□□□□ -2.17
RXRBP28702 RNU6-274P-201ENST00000459566 107 ntBASIC1.5□□□□□ -2.17
RXRBP28702 SNORA70.22-201ENST00000517160 124 ntBASIC1.5□□□□□ -2.17
RXRBP28702 MIR548O2-201ENST00000616090 70 ntBASIC1.5□□□□□ -2.17
RXRBP28702 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
RXRBP28702 SNORA25.4-201ENST00000363666 124 ntBASIC1.49□□□□□ -2.17
RXRBP28702 RNU6-895P-201ENST00000384125 103 ntBASIC1.49□□□□□ -2.17
RXRBP28702 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
RXRBP28702 NAMPTP3-201ENST00000569273 224 ntBASIC1.49□□□□□ -2.17
RXRBP28702 MIR8087-201ENST00000612745 78 ntBASIC1.49□□□□□ -2.17
RXRBP28702 SNORD26-201ENST00000384147 75 ntBASIC1.48□□□□□ -2.17
RXRBP28702 RNU7-104P-201ENST00000459398 79 ntBASIC1.48□□□□□ -2.17
RXRBP28702 AC002350.1-201ENST00000490759 375 ntBASIC1.48□□□□□ -2.17
RXRBP28702 AL136317.1-201ENST00000612653 226 ntBASIC1.48□□□□□ -2.17
RXRBP28702 RNU6-1216P-201ENST00000362590 107 ntBASIC1.47□□□□□ -2.17
RXRBP28702 MIR644A-201ENST00000385262 94 ntBASIC1.47□□□□□ -2.17
RXRBP28702 MIR758-201ENST00000390227 88 ntBASIC1.47□□□□□ -2.17
RXRBP28702 RNU6-982P-201ENST00000516216 102 ntBASIC1.47□□□□□ -2.17
RXRBP28702 MIR3973-201ENST00000579824 107 ntBASIC1.47□□□□□ -2.17
RXRBP28702 MIR6513-201ENST00000621188 64 ntBASIC1.47□□□□□ -2.17
RXRBP28702 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RXRBP28702 RNU6-54P-201ENST00000365563 107 ntBASIC1.46□□□□□ -2.18
RXRBP28702 RNU6-1039P-201ENST00000383931 107 ntBASIC1.46□□□□□ -2.18
RXRBP28702 AC093423.1-201ENST00000440817 142 ntBASIC1.46□□□□□ -2.18
RXRBP28702 RNU6-716P-201ENST00000365621 103 ntBASIC1.45□□□□□ -2.18
RXRBP28702 SNORD42B-201ENST00000458893 67 ntBASIC1.45□□□□□ -2.18
RXRBP28702 SNORA40.17-201ENST00000517256 115 ntBASIC1.45□□□□□ -2.18
RXRBP28702 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
RXRBP28702 AL691482.2-201ENST00000457453 84 ntBASIC1.44□□□□□ -2.18
RXRBP28702 MIR4511-201ENST00000582784 87 ntBASIC1.44□□□□□ -2.18
RXRBP28702 MIR6857-201ENST00000613267 93 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms