Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU7-74P-201ENST00000459104 62 ntBASIC-0.15□□□□□ -2.43
RPA1P27694 RNU7-159P-201ENST00000459284 62 ntBASIC-0.15□□□□□ -2.43
RPA1P27694 MIR548O2-201ENST00000616090 70 ntBASIC-0.15□□□□□ -2.43
RPA1P27694 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.15□□□□□ -2.43
RPA1P27694 MIR655-201ENST00000362159 97 ntBASIC-0.16□□□□□ -2.44
RPA1P27694 RNU6-106P-201ENST00000384405 107 ntBASIC-0.16□□□□□ -2.44
RPA1P27694 MIR451A-201ENST00000385059 72 ntBASIC-0.16□□□□□ -2.44
RPA1P27694 RNU6-644P-201ENST00000391155 98 ntBASIC-0.16□□□□□ -2.44
RPA1P27694 SNORD4B-201ENST00000459083 72 ntBASIC-0.16□□□□□ -2.44
RPA1P27694 U7.6-201ENST00000610841 64 ntBASIC-0.16□□□□□ -2.44
RPA1P27694 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.16□□□□□ -2.44
RPA1P27694 MIR582-201ENST00000365731 98 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 RNU6-22P-201ENST00000384355 107 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 RNU6-476P-201ENST00000384726 107 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 SNORA49-201ENST00000386157 136 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 SNORA75.1-201ENST00000391130 148 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 RNU6-935P-201ENST00000410371 100 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 AC244250.2-201ENST00000418731 148 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 MIR4536-1-201ENST00000583537 88 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 uc_338.10-201ENST00000621872 182 ntBASIC-0.17□□□□□ -2.44
RPA1P27694 SNORD45B-201ENST00000364617 72 ntBASIC-0.18□□□□□ -2.44
RPA1P27694 RNA5SP205-201ENST00000364653 136 ntBASIC-0.18□□□□□ -2.44
RPA1P27694 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.18□□□□□ -2.44
RPA1P27694 AC104692.1-201ENST00000472406 90 ntBASIC-0.18□□□□□ -2.44
RPA1P27694 CR383656.4-201ENST00000546909 122 ntBASIC-0.18□□□□□ -2.44
RPA1P27694 MIR3064-201ENST00000581130 66 ntBASIC-0.18□□□□□ -2.44
RPA1P27694 AC145423.2-201ENST00000610631 239 ntBASIC-0.18□□□□□ -2.44
RPA1P27694 RNA5SP457-201ENST00000363657 124 ntBASIC-0.19□□□□□ -2.44
RPA1P27694 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.19□□□□□ -2.44
RPA1P27694 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
RPA1P27694 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.19□□□□□ -2.44
RPA1P27694 AC008267.6-201ENST00000441664 139 ntBASIC-0.19□□□□□ -2.44
RPA1P27694 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.19□□□□□ -2.44
RPA1P27694 FGF7P7-201ENST00000514120 227 ntBASIC-0.19□□□□□ -2.44
RPA1P27694 RNU6-162P-201ENST00000516228 103 ntBASIC-0.19□□□□□ -2.44
RPA1P27694 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.2□□□□□ -2.44
RPA1P27694 RNU7-61P-201ENST00000515897 61 ntBASIC-0.2□□□□□ -2.44
RPA1P27694 SCARNA23-201ENST00000516060 130 ntBASIC-0.2□□□□□ -2.44
RPA1P27694 RNU6-589P-201ENST00000516485 107 ntBASIC-0.2□□□□□ -2.44
RPA1P27694 AC026421.1-201ENST00000519101 163 ntBASIC-0.2□□□□□ -2.44
RPA1P27694 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.2□□□□□ -2.44
RPA1P27694 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.21□□□□□ -2.44
RPA1P27694 SNORD58A-201ENST00000383875 65 ntBASIC-0.21□□□□□ -2.44
RPA1P27694 RNU6-65P-201ENST00000516332 98 ntBASIC-0.21□□□□□ -2.44
RPA1P27694 MIR4439-201ENST00000583746 80 ntBASIC-0.21□□□□□ -2.44
RPA1P27694 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.22□□□□□ -2.44
RPA1P27694 RNU4-36P-201ENST00000364294 144 ntBASIC-0.22□□□□□ -2.44
RPA1P27694 SNORA24B-201ENST00000384176 131 ntBASIC-0.22□□□□□ -2.44
RPA1P27694 SNORD114-12-201ENST00000365400 75 ntBASIC-0.23□□□□□ -2.45
RPA1P27694 MIR548E-201ENST00000408287 88 ntBASIC-0.23□□□□□ -2.45
RPA1P27694 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.23□□□□□ -2.45
RPA1P27694 AC104996.3-201ENST00000590718 94 ntBASIC-0.23□□□□□ -2.45
RPA1P27694 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.24□□□□□ -2.45
RPA1P27694 snoU13.17-201ENST00000458802 104 ntBASIC-0.24□□□□□ -2.45
RPA1P27694 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.24□□□□□ -2.45
RPA1P27694 RNU6-811P-201ENST00000384069 107 ntBASIC-0.25□□□□□ -2.45
RPA1P27694 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.25□□□□□ -2.45
RPA1P27694 RNU6-412P-201ENST00000516434 106 ntBASIC-0.25□□□□□ -2.45
RPA1P27694 SNORA18.5-201ENST00000516616 101 ntBASIC-0.25□□□□□ -2.45
RPA1P27694 MIR148A-201ENST00000362215 68 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 MIR450A1-201ENST00000362262 91 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 RNU4-32P-201ENST00000363404 141 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 SNORD114-29-201ENST00000364819 70 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 SNORD49B-201ENST00000365172 72 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 SNORD113-1-201ENST00000365321 69 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 RNU6-519P-201ENST00000410590 108 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 RNU6-887P-201ENST00000410660 100 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 SNORA40.17-201ENST00000517256 115 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 U7.3-201ENST00000616123 62 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 AC132825.6-201ENST00000638861 357 ntBASIC-0.26□□□□□ -2.45
RPA1P27694 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.27□□□□□ -2.45
RPA1P27694 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.27□□□□□ -2.45
RPA1P27694 RNA5SP257-201ENST00000363023 116 ntBASIC-0.27□□□□□ -2.45
RPA1P27694 RNU6-990P-201ENST00000364385 104 ntBASIC-0.27□□□□□ -2.45
RPA1P27694 RNY4P18-201ENST00000391107 89 ntBASIC-0.27□□□□□ -2.45
RPA1P27694 RNU6-479P-201ENST00000516348 105 ntBASIC-0.27□□□□□ -2.45
RPA1P27694 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.27□□□□□ -2.45
RPA1P27694 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.27□□□□□ -2.45
RPA1P27694 SNORA63.2-201ENST00000362603 126 ntBASIC-0.28□□□□□ -2.45
RPA1P27694 SNORD115-27-201ENST00000364430 82 ntBASIC-0.28□□□□□ -2.45
RPA1P27694 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.28□□□□□ -2.45
RPA1P27694 MIR9-2-201ENST00000384838 87 ntBASIC-0.28□□□□□ -2.45
RPA1P27694 MIR214-201ENST00000385214 110 ntBASIC-0.28□□□□□ -2.45
RPA1P27694 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.28□□□□□ -2.45
RPA1P27694 AL606753.1-201ENST00000427435 87 ntBASIC-0.28□□□□□ -2.45
RPA1P27694 RNU7-153P-201ENST00000516455 62 ntBASIC-0.28□□□□□ -2.45
RPA1P27694 AL590491.3-201ENST00000610731 82 ntBASIC-0.28□□□□□ -2.45
RPA1P27694 MIR20A-201ENST00000362279 71 ntBASIC-0.29□□□□□ -2.46
RPA1P27694 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.29□□□□□ -2.46
RPA1P27694 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.29□□□□□ -2.46
RPA1P27694 MIR1302-5-201ENST00000408164 150 ntBASIC-0.29□□□□□ -2.46
RPA1P27694 SNORD4A-201ENST00000459174 72 ntBASIC-0.29□□□□□ -2.46
RPA1P27694 AP000676.1-201ENST00000533307 52 ntBASIC-0.29□□□□□ -2.46
RPA1P27694 RNU6-495P-201ENST00000362995 107 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms