Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 RNA5SP61-201ENST00000516453 100 ntBASIC1.24□□□□□ -2.21
LMO1P25800 RNU6-1089P-201ENST00000516473 104 ntBASIC1.24□□□□□ -2.21
LMO1P25800 RN7SKP88-201ENST00000516847 250 ntBASIC1.24□□□□□ -2.21
LMO1P25800 RNU7-10P-201ENST00000607194 63 ntBASIC1.24□□□□□ -2.21
LMO1P25800 7SK.8-201ENST00000612110 250 ntBASIC1.24□□□□□ -2.21
LMO1P25800 7SK.11-201ENST00000615477 250 ntBASIC1.24□□□□□ -2.21
LMO1P25800 7SK.13-201ENST00000622040 250 ntBASIC1.24□□□□□ -2.21
LMO1P25800 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LMO1P25800 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.23□□□□□ -2.21
LMO1P25800 MIR1257-201ENST00000408490 117 ntBASIC1.23□□□□□ -2.21
LMO1P25800 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.23□□□□□ -2.21
LMO1P25800 RNU7-40P-201ENST00000516397 64 ntBASIC1.23□□□□□ -2.21
LMO1P25800 SNORA31.24-201ENST00000517232 57 ntBASIC1.23□□□□□ -2.21
LMO1P25800 MIR6739-201ENST00000622461 75 ntBASIC1.23□□□□□ -2.21
LMO1P25800 RNU1-42P-201ENST00000364033 160 ntBASIC1.22□□□□□ -2.21
LMO1P25800 Y_RNA.379-201ENST00000365653 102 ntBASIC1.22□□□□□ -2.21
LMO1P25800 RNU6-535P-201ENST00000384722 107 ntBASIC1.22□□□□□ -2.21
LMO1P25800 SNORA41B-201ENST00000384785 128 ntBASIC1.22□□□□□ -2.21
LMO1P25800 MIR630-201ENST00000384957 97 ntBASIC1.22□□□□□ -2.21
LMO1P25800 MIR1323-201ENST00000408090 73 ntBASIC1.22□□□□□ -2.21
LMO1P25800 AL157398.1-201ENST00000452981 186 ntBASIC1.22□□□□□ -2.21
LMO1P25800 RPS29P23-201ENST00000458635 123 ntBASIC1.22□□□□□ -2.21
LMO1P25800 RNA5SP147-201ENST00000516493 109 ntBASIC1.22□□□□□ -2.21
LMO1P25800 uc_338.16-201ENST00000621804 95 ntBASIC1.22□□□□□ -2.21
LMO1P25800 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
LMO1P25800 SNORA75.2-201ENST00000391138 150 ntBASIC1.21□□□□□ -2.22
LMO1P25800 SNORA75.3-201ENST00000391231 150 ntBASIC1.21□□□□□ -2.22
LMO1P25800 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
LMO1P25800 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
LMO1P25800 SNORA31.14-201ENST00000516728 116 ntBASIC1.21□□□□□ -2.22
LMO1P25800 MIR4771-2-201ENST00000577758 74 ntBASIC1.21□□□□□ -2.22
LMO1P25800 MIR4771-1-201ENST00000582617 74 ntBASIC1.21□□□□□ -2.22
LMO1P25800 MIR4676-201ENST00000583078 72 ntBASIC1.21□□□□□ -2.22
LMO1P25800 AL157834.3-201ENST00000615543 103 ntBASIC1.21□□□□□ -2.22
LMO1P25800 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
LMO1P25800 RNA5SP215-201ENST00000363440 122 ntBASIC1.2□□□□□ -2.22
LMO1P25800 RNU6V-201ENST00000384105 107 ntBASIC1.2□□□□□ -2.22
LMO1P25800 RNU6-1246P-201ENST00000391064 107 ntBASIC1.2□□□□□ -2.22
LMO1P25800 AL354695.1-201ENST00000427935 228 ntBASIC1.2□□□□□ -2.22
LMO1P25800 RNU7-174P-201ENST00000516248 59 ntBASIC1.2□□□□□ -2.22
LMO1P25800 MIR548V-201ENST00000584165 80 ntBASIC1.2□□□□□ -2.22
LMO1P25800 AC106800.4-201ENST00000614905 153 ntBASIC1.2□□□□□ -2.22
LMO1P25800 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
LMO1P25800 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
LMO1P25800 SNORA2.1-201ENST00000363089 137 ntBASIC1.19□□□□□ -2.22
LMO1P25800 RNU6-934P-201ENST00000365154 107 ntBASIC1.19□□□□□ -2.22
LMO1P25800 RNU7-102P-201ENST00000458948 62 ntBASIC1.19□□□□□ -2.22
LMO1P25800 MIR6504-201ENST00000613520 61 ntBASIC1.19□□□□□ -2.22
LMO1P25800 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.19□□□□□ -2.22
LMO1P25800 U2.7-201ENST00000619197 100 ntBASIC1.19□□□□□ -2.22
LMO1P25800 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
LMO1P25800 SNORD115-44-201ENST00000365391 82 ntBASIC1.18□□□□□ -2.22
LMO1P25800 MIR617-201ENST00000385030 97 ntBASIC1.18□□□□□ -2.22
LMO1P25800 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
LMO1P25800 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
LMO1P25800 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LMO1P25800 RNU6-42P-201ENST00000384165 107 ntBASIC1.17□□□□□ -2.22
LMO1P25800 MIR7-2-201ENST00000384970 110 ntBASIC1.17□□□□□ -2.22
LMO1P25800 RPS26P5-201ENST00000418544 335 ntBASIC1.17□□□□□ -2.22
LMO1P25800 RNU7-56P-201ENST00000458744 62 ntBASIC1.17□□□□□ -2.22
LMO1P25800 snoU13.13-201ENST00000458842 104 ntBASIC1.17□□□□□ -2.22
LMO1P25800 AC048334.1-201ENST00000477975 159 ntBASIC1.17□□□□□ -2.22
LMO1P25800 SNORA31.2-201ENST00000516019 134 ntBASIC1.17□□□□□ -2.22
LMO1P25800 RNU7-13P-201ENST00000516413 62 ntBASIC1.17□□□□□ -2.22
LMO1P25800 SNORA40.16-201ENST00000517238 121 ntBASIC1.17□□□□□ -2.22
LMO1P25800 SNORD115-24-201ENST00000363528 82 ntBASIC1.16□□□□□ -2.22
LMO1P25800 SNORD113.3-201ENST00000364630 78 ntBASIC1.16□□□□□ -2.22
LMO1P25800 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
LMO1P25800 SNORD113-2-201ENST00000391082 72 ntBASIC1.16□□□□□ -2.22
LMO1P25800 Y_RNA.633-201ENST00000459107 95 ntBASIC1.16□□□□□ -2.22
LMO1P25800 RNA5SP220-201ENST00000516298 104 ntBASIC1.16□□□□□ -2.22
LMO1P25800 MIR4421-201ENST00000578133 69 ntBASIC1.16□□□□□ -2.22
LMO1P25800 MIR548AG1-201ENST00000579932 66 ntBASIC1.16□□□□□ -2.22
LMO1P25800 MIR4804-201ENST00000581683 73 ntBASIC1.16□□□□□ -2.22
LMO1P25800 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
LMO1P25800 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
LMO1P25800 AC067940.1-201ENST00000458411 300 ntBASIC1.15□□□□□ -2.23
LMO1P25800 AC018659.1-201ENST00000551083 169 ntBASIC1.15□□□□□ -2.23
LMO1P25800 MIR6734-201ENST00000621166 68 ntBASIC1.15□□□□□ -2.23
LMO1P25800 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
LMO1P25800 Y_RNA.325-201ENST00000365171 122 ntBASIC1.14□□□□□ -2.23
LMO1P25800 RNU6-1335P-201ENST00000365426 107 ntBASIC1.14□□□□□ -2.23
LMO1P25800 MIR582-201ENST00000365731 98 ntBASIC1.14□□□□□ -2.23
LMO1P25800 SNORD26-201ENST00000384147 75 ntBASIC1.14□□□□□ -2.23
LMO1P25800 MIR489-201ENST00000384923 84 ntBASIC1.14□□□□□ -2.23
LMO1P25800 MIR1276-201ENST00000408707 83 ntBASIC1.14□□□□□ -2.23
LMO1P25800 AC023827.1-201ENST00000569247 97 ntBASIC1.14□□□□□ -2.23
LMO1P25800 AC090617.8-201ENST00000623339 167 ntBASIC1.14□□□□□ -2.23
LMO1P25800 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
LMO1P25800 RNU6-698P-201ENST00000363523 107 ntBASIC1.13□□□□□ -2.23
LMO1P25800 RNU6-34P-201ENST00000364874 107 ntBASIC1.13□□□□□ -2.23
LMO1P25800 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
LMO1P25800 MIR521-2-201ENST00000384818 87 ntBASIC1.13□□□□□ -2.23
LMO1P25800 MT-TY-201ENST00000387409 66 ntBASIC1.13□□□□□ -2.23
LMO1P25800 SNORD12-201ENST00000391002 90 ntBASIC1.13□□□□□ -2.23
LMO1P25800 RNU7-104P-201ENST00000459398 79 ntBASIC1.13□□□□□ -2.23
LMO1P25800 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
LMO1P25800 AL353770.2-201ENST00000620024 78 ntBASIC1.13□□□□□ -2.23
LMO1P25800 SNORA33.1-201ENST00000364957 130 ntBASIC1.12□□□□□ -2.23
LMO1P25800 Y_RNA.330-201ENST00000365230 109 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 269.3 ms