Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 RNU6-65P-201ENST00000516332 98 ntBASIC-1.63□□□□□ -2.67
SRMP19623 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.63□□□□□ -2.67
SRMP19623 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.63□□□□□ -2.67
SRMP19623 MIR3121-201ENST00000579680 77 ntBASIC-1.63□□□□□ -2.67
SRMP19623 MIR6129-201ENST00000616087 109 ntBASIC-1.63□□□□□ -2.67
SRMP19623 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.64□□□□□ -2.67
SRMP19623 RNU7-24P-201ENST00000458867 62 ntBASIC-1.64□□□□□ -2.67
SRMP19623 FGF7P7-201ENST00000514120 227 ntBASIC-1.64□□□□□ -2.67
SRMP19623 RNU6-719P-201ENST00000516671 104 ntBASIC-1.64□□□□□ -2.67
SRMP19623 MIR5591-201ENST00000578248 65 ntBASIC-1.64□□□□□ -2.67
SRMP19623 MIR4464-201ENST00000580818 92 ntBASIC-1.64□□□□□ -2.67
SRMP19623 MIR4536-1-201ENST00000583537 88 ntBASIC-1.64□□□□□ -2.67
SRMP19623 MIR3171-201ENST00000584270 74 ntBASIC-1.64□□□□□ -2.67
SRMP19623 MIR1246-201ENST00000636535 73 ntBASIC-1.64□□□□□ -2.67
SRMP19623 SNORA63.2-201ENST00000362603 126 ntBASIC-1.65□□□□□ -2.67
SRMP19623 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.65□□□□□ -2.67
SRMP19623 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.65□□□□□ -2.67
SRMP19623 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.65□□□□□ -2.67
SRMP19623 AC130289.1-201ENST00000577321 73 ntBASIC-1.65□□□□□ -2.67
SRMP19623 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.66□□□□□ -2.68
SRMP19623 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.66□□□□□ -2.68
SRMP19623 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.66□□□□□ -2.68
SRMP19623 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.66□□□□□ -2.68
SRMP19623 MIR29B1-201ENST00000385015 81 ntBASIC-1.66□□□□□ -2.68
SRMP19623 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.66□□□□□ -2.68
SRMP19623 SNORD37.2-201ENST00000391075 66 ntBASIC-1.66□□□□□ -2.68
SRMP19623 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.66□□□□□ -2.68
SRMP19623 AL353803.5-201ENST00000599815 141 ntBASIC-1.66□□□□□ -2.68
SRMP19623 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.66□□□□□ -2.68
SRMP19623 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.66□□□□□ -2.68
SRMP19623 U6.96-201ENST00000636425 70 ntBASIC-1.66□□□□□ -2.68
SRMP19623 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.67□□□□□ -2.68
SRMP19623 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.67□□□□□ -2.68
SRMP19623 SNORD50.2-201ENST00000365465 70 ntBASIC-1.67□□□□□ -2.68
SRMP19623 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.67□□□□□ -2.68
SRMP19623 MTND2P23-201ENST00000422990 651 ntBASIC-1.67□□□□□ -2.68
SRMP19623 AC021146.9-201ENST00000512503 156 ntBASIC-1.67□□□□□ -2.68
SRMP19623 RNU6-635P-201ENST00000516651 102 ntBASIC-1.67□□□□□ -2.68
SRMP19623 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.67□□□□□ -2.68
SRMP19623 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.68□□□□□ -2.68
SRMP19623 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.68□□□□□ -2.68
SRMP19623 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.68□□□□□ -2.68
SRMP19623 MIR527-201ENST00000385244 85 ntBASIC-1.68□□□□□ -2.68
SRMP19623 SNORD127-201ENST00000458892 86 ntBASIC-1.68□□□□□ -2.68
SRMP19623 AC020661.2-201ENST00000560114 134 ntBASIC-1.68□□□□□ -2.68
SRMP19623 MIR4520-1-201ENST00000582609 70 ntBASIC-1.68□□□□□ -2.68
SRMP19623 AL445584.3-201ENST00000617173 78 ntBASIC-1.68□□□□□ -2.68
SRMP19623 MIR6818-201ENST00000621576 65 ntBASIC-1.68□□□□□ -2.68
SRMP19623 RNU6-639P-201ENST00000384074 107 ntBASIC-1.69□□□□□ -2.68
SRMP19623 RNU6-746P-201ENST00000384112 109 ntBASIC-1.69□□□□□ -2.68
SRMP19623 MIR548S-201ENST00000581352 82 ntBASIC-1.69□□□□□ -2.68
SRMP19623 SNORA33.2-201ENST00000365413 134 ntBASIC-1.7□□□□□ -2.68
SRMP19623 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.7□□□□□ -2.68
SRMP19623 SNORA24B-201ENST00000384176 131 ntBASIC-1.7□□□□□ -2.68
SRMP19623 MIR1207-201ENST00000408249 87 ntBASIC-1.7□□□□□ -2.68
SRMP19623 SNORD75.2-201ENST00000408784 58 ntBASIC-1.7□□□□□ -2.68
SRMP19623 AC025521.1-201ENST00000621624 286 ntBASIC-1.7□□□□□ -2.68
SRMP19623 MIR6888-201ENST00000621977 67 ntBASIC-1.7□□□□□ -2.68
SRMP19623 MIR3658-201ENST00000636291 56 ntBASIC-1.7□□□□□ -2.68
SRMP19623 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.71□□□□□ -2.68
SRMP19623 RNU6-924P-201ENST00000362926 108 ntBASIC-1.71□□□□□ -2.68
SRMP19623 RNY4P6-201ENST00000363667 96 ntBASIC-1.71□□□□□ -2.68
SRMP19623 RNU6-990P-201ENST00000364385 104 ntBASIC-1.71□□□□□ -2.68
SRMP19623 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.71□□□□□ -2.68
SRMP19623 MIR6502-201ENST00000617296 76 ntBASIC-1.71□□□□□ -2.68
SRMP19623 RNU6-238P-201ENST00000363313 106 ntBASIC-1.72□□□□□ -2.68
SRMP19623 MIR548A1-201ENST00000385041 97 ntBASIC-1.72□□□□□ -2.68
SRMP19623 MIR548U-201ENST00000390728 81 ntBASIC-1.72□□□□□ -2.68
SRMP19623 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.72□□□□□ -2.68
SRMP19623 RNU7-85P-201ENST00000458851 63 ntBASIC-1.72□□□□□ -2.68
SRMP19623 SNORD115-33-201ENST00000363723 82 ntBASIC-1.73□□□□□ -2.69
SRMP19623 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.73□□□□□ -2.69
SRMP19623 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.73□□□□□ -2.69
SRMP19623 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.73□□□□□ -2.69
SRMP19623 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.73□□□□□ -2.69
SRMP19623 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.73□□□□□ -2.69
SRMP19623 RNU2-38P-201ENST00000410856 79 ntBASIC-1.73□□□□□ -2.69
SRMP19623 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.73□□□□□ -2.69
SRMP19623 RNU4-71P-201ENST00000516258 113 ntBASIC-1.73□□□□□ -2.69
SRMP19623 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.73□□□□□ -2.69
SRMP19623 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.74□□□□□ -2.69
SRMP19623 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.74□□□□□ -2.69
SRMP19623 MIR4770-201ENST00000579149 58 ntBASIC-1.74□□□□□ -2.69
SRMP19623 AC090617.8-201ENST00000623339 167 ntBASIC-1.74□□□□□ -2.69
SRMP19623 AC091912.2-201ENST00000624798 167 ntBASIC-1.74□□□□□ -2.69
SRMP19623 RNU6-132P-201ENST00000383863 107 ntBASIC-1.75□□□□□ -2.69
SRMP19623 SNORA26.4-201ENST00000391188 123 ntBASIC-1.75□□□□□ -2.69
SRMP19623 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
SRMP19623 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.75□□□□□ -2.69
SRMP19623 MIR3140-201ENST00000583685 90 ntBASIC-1.75□□□□□ -2.69
SRMP19623 MIR6874-201ENST00000635894 71 ntBASIC-1.75□□□□□ -2.69
SRMP19623 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.76□□□□□ -2.69
SRMP19623 RNU6-816P-201ENST00000390914 107 ntBASIC-1.76□□□□□ -2.69
SRMP19623 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.76□□□□□ -2.69
SRMP19623 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.76□□□□□ -2.69
SRMP19623 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.76□□□□□ -2.69
SRMP19623 MIR1263-201ENST00000408324 86 ntBASIC-1.76□□□□□ -2.69
SRMP19623 SNORD63.1-201ENST00000516178 80 ntBASIC-1.76□□□□□ -2.69
SRMP19623 RNU6-412P-201ENST00000516434 106 ntBASIC-1.76□□□□□ -2.69
SRMP19623 MIR3064-201ENST00000581130 66 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms