Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 RNU6V-201ENST00000384105 107 ntBASIC1.3□□□□□ -2.2
TNFRSF1AP19438 SNORA17.3-201ENST00000391159 129 ntBASIC1.3□□□□□ -2.2
TNFRSF1AP19438 AC067940.1-201ENST00000458411 300 ntBASIC1.3□□□□□ -2.2
TNFRSF1AP19438 RNU6-1089P-201ENST00000516473 104 ntBASIC1.3□□□□□ -2.2
TNFRSF1AP19438 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.3□□□□□ -2.2
TNFRSF1AP19438 MIR548V-201ENST00000584165 80 ntBASIC1.3□□□□□ -2.2
TNFRSF1AP19438 AL157834.3-201ENST00000615543 103 ntBASIC1.3□□□□□ -2.2
TNFRSF1AP19438 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
TNFRSF1AP19438 Y_RNA.363-201ENST00000365529 113 ntBASIC1.29□□□□□ -2.2
TNFRSF1AP19438 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
TNFRSF1AP19438 SNORA31.2-201ENST00000516019 134 ntBASIC1.29□□□□□ -2.2
TNFRSF1AP19438 MIR4498-201ENST00000577599 66 ntBASIC1.29□□□□□ -2.2
TNFRSF1AP19438 RNU6-302P-201ENST00000365249 107 ntBASIC1.28□□□□□ -2.2
TNFRSF1AP19438 RNU1-119P-201ENST00000391122 165 ntBASIC1.28□□□□□ -2.2
TNFRSF1AP19438 MIR1304-201ENST00000408243 91 ntBASIC1.28□□□□□ -2.2
TNFRSF1AP19438 RNU7-56P-201ENST00000458744 62 ntBASIC1.28□□□□□ -2.2
TNFRSF1AP19438 RNU6-1053P-201ENST00000515930 101 ntBASIC1.28□□□□□ -2.2
TNFRSF1AP19438 MIR6739-201ENST00000622461 75 ntBASIC1.28□□□□□ -2.2
TNFRSF1AP19438 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TNFRSF1AP19438 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
TNFRSF1AP19438 RNU6-1312P-201ENST00000362425 108 ntBASIC1.27□□□□□ -2.21
TNFRSF1AP19438 Y_RNA.174-201ENST00000363781 105 ntBASIC1.27□□□□□ -2.21
TNFRSF1AP19438 RNU4-88P-201ENST00000411220 86 ntBASIC1.27□□□□□ -2.21
TNFRSF1AP19438 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
TNFRSF1AP19438 RNU1-42P-201ENST00000364033 160 ntBASIC1.26□□□□□ -2.21
TNFRSF1AP19438 SNORA25.8-201ENST00000364831 128 ntBASIC1.26□□□□□ -2.21
TNFRSF1AP19438 RNU6-994P-201ENST00000410507 111 ntBASIC1.26□□□□□ -2.21
TNFRSF1AP19438 AL157398.1-201ENST00000452981 186 ntBASIC1.26□□□□□ -2.21
TNFRSF1AP19438 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
TNFRSF1AP19438 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TNFRSF1AP19438 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TNFRSF1AP19438 MIR378A-201ENST00000362177 66 ntBASIC1.25□□□□□ -2.21
TNFRSF1AP19438 MIR630-201ENST00000384957 97 ntBASIC1.25□□□□□ -2.21
TNFRSF1AP19438 MIR100-201ENST00000385259 80 ntBASIC1.25□□□□□ -2.21
TNFRSF1AP19438 RNU7-21P-201ENST00000459430 62 ntBASIC1.25□□□□□ -2.21
TNFRSF1AP19438 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
TNFRSF1AP19438 AL359821.1-201ENST00000605519 182 ntBASIC1.25□□□□□ -2.21
TNFRSF1AP19438 AC067863.3-201ENST00000624172 122 ntBASIC1.25□□□□□ -2.21
TNFRSF1AP19438 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TNFRSF1AP19438 MIR548C-201ENST00000384815 97 ntBASIC1.24□□□□□ -2.21
TNFRSF1AP19438 MIR520F-201ENST00000384824 87 ntBASIC1.24□□□□□ -2.21
TNFRSF1AP19438 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
TNFRSF1AP19438 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
TNFRSF1AP19438 AL354695.1-201ENST00000427935 228 ntBASIC1.24□□□□□ -2.21
TNFRSF1AP19438 MIR4781-201ENST00000585250 76 ntBASIC1.24□□□□□ -2.21
TNFRSF1AP19438 snoU13.31-201ENST00000607291 104 ntBASIC1.24□□□□□ -2.21
TNFRSF1AP19438 AL136317.1-201ENST00000612653 226 ntBASIC1.24□□□□□ -2.21
TNFRSF1AP19438 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
TNFRSF1AP19438 Y_RNA.379-201ENST00000365653 102 ntBASIC1.23□□□□□ -2.21
TNFRSF1AP19438 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
TNFRSF1AP19438 RNU6-910P-201ENST00000390844 107 ntBASIC1.23□□□□□ -2.21
TNFRSF1AP19438 MIR1323-201ENST00000408090 73 ntBASIC1.23□□□□□ -2.21
TNFRSF1AP19438 MIR4303-201ENST00000581299 66 ntBASIC1.23□□□□□ -2.21
TNFRSF1AP19438 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
TNFRSF1AP19438 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.22□□□□□ -2.21
TNFRSF1AP19438 Y_RNA.226-201ENST00000364337 114 ntBASIC1.22□□□□□ -2.21
TNFRSF1AP19438 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
TNFRSF1AP19438 MT-TY-201ENST00000387409 66 ntBASIC1.22□□□□□ -2.21
TNFRSF1AP19438 SNORA70.22-201ENST00000517160 124 ntBASIC1.22□□□□□ -2.21
TNFRSF1AP19438 AC018659.1-201ENST00000551083 169 ntBASIC1.22□□□□□ -2.21
TNFRSF1AP19438 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
TNFRSF1AP19438 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
TNFRSF1AP19438 RNU4-62P-201ENST00000410125 130 ntBASIC1.21□□□□□ -2.22
TNFRSF1AP19438 snoU13.13-201ENST00000458842 104 ntBASIC1.21□□□□□ -2.22
TNFRSF1AP19438 RNU7-74P-201ENST00000459104 62 ntBASIC1.21□□□□□ -2.22
TNFRSF1AP19438 MIR4460-201ENST00000577862 86 ntBASIC1.21□□□□□ -2.22
TNFRSF1AP19438 MIR548AD-201ENST00000584780 82 ntBASIC1.21□□□□□ -2.22
TNFRSF1AP19438 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.21□□□□□ -2.22
TNFRSF1AP19438 MIR1-1-201ENST00000362147 71 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 Y_RNA.250-201ENST00000364542 110 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 RNU6-1162P-201ENST00000384443 104 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 SNORA80D-201ENST00000384488 135 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 MIR521-2-201ENST00000384818 87 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 MIR644A-201ENST00000385262 94 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 SNORD41.1-201ENST00000391000 69 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 RNU6-321P-201ENST00000410912 106 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 RNU7-174P-201ENST00000516248 59 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 RMST_2.1-201ENST00000617263 136 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 U4.4-201ENST00000620626 117 ntBASIC1.2□□□□□ -2.22
TNFRSF1AP19438 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
TNFRSF1AP19438 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
TNFRSF1AP19438 MIR320A-201ENST00000385302 82 ntBASIC1.19□□□□□ -2.22
TNFRSF1AP19438 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TNFRSF1AP19438 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.19□□□□□ -2.22
TNFRSF1AP19438 MIR1287-201ENST00000408492 90 ntBASIC1.19□□□□□ -2.22
TNFRSF1AP19438 MIR1827-201ENST00000408549 66 ntBASIC1.19□□□□□ -2.22
TNFRSF1AP19438 SNORD79.1-201ENST00000516069 84 ntBASIC1.19□□□□□ -2.22
TNFRSF1AP19438 U2.7-201ENST00000619197 100 ntBASIC1.19□□□□□ -2.22
TNFRSF1AP19438 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TNFRSF1AP19438 RNU6-698P-201ENST00000363523 107 ntBASIC1.18□□□□□ -2.22
TNFRSF1AP19438 RNU6-753P-201ENST00000363926 107 ntBASIC1.18□□□□□ -2.22
TNFRSF1AP19438 RNU6-34P-201ENST00000364874 107 ntBASIC1.18□□□□□ -2.22
TNFRSF1AP19438 MIR517B-201ENST00000385102 67 ntBASIC1.18□□□□□ -2.22
TNFRSF1AP19438 SNORD12-201ENST00000391002 90 ntBASIC1.18□□□□□ -2.22
TNFRSF1AP19438 SNORD113-2-201ENST00000391082 72 ntBASIC1.18□□□□□ -2.22
TNFRSF1AP19438 AP1B1P2-201ENST00000416196 106 ntBASIC1.18□□□□□ -2.22
TNFRSF1AP19438 MIR4639-201ENST00000584938 69 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 245.5 ms