Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.16
NID1P14543 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NID1P14543 RNU6-829P-201ENST00000363700 112 ntBASIC1.58□□□□□ -2.16
NID1P14543 RNA5SP192-201ENST00000364404 120 ntBASIC1.58□□□□□ -2.16
NID1P14543 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
NID1P14543 SCARNA21.1-201ENST00000515996 128 ntBASIC1.58□□□□□ -2.16
NID1P14543 SNORA70.22-201ENST00000517160 124 ntBASIC1.58□□□□□ -2.16
NID1P14543 MIR466-201ENST00000580653 84 ntBASIC1.58□□□□□ -2.16
NID1P14543 MIR4303-201ENST00000581299 66 ntBASIC1.58□□□□□ -2.16
NID1P14543 RNU6-1079P-201ENST00000362861 110 ntBASIC1.57□□□□□ -2.16
NID1P14543 MIR644A-201ENST00000385262 94 ntBASIC1.57□□□□□ -2.16
NID1P14543 TRMT112P2-201ENST00000512910 132 ntBASIC1.57□□□□□ -2.16
NID1P14543 RNU6-469P-201ENST00000516253 101 ntBASIC1.57□□□□□ -2.16
NID1P14543 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NID1P14543 RNA5SP215-201ENST00000363440 122 ntBASIC1.56□□□□□ -2.16
NID1P14543 Y_RNA.355-201ENST00000365462 98 ntBASIC1.56□□□□□ -2.16
NID1P14543 SNORD12-201ENST00000391002 90 ntBASIC1.56□□□□□ -2.16
NID1P14543 RNA5SP299-201ENST00000391203 116 ntBASIC1.56□□□□□ -2.16
NID1P14543 MIR548L-201ENST00000408303 86 ntBASIC1.56□□□□□ -2.16
NID1P14543 AC002350.1-201ENST00000490759 375 ntBASIC1.56□□□□□ -2.16
NID1P14543 MIR3122-201ENST00000577243 73 ntBASIC1.56□□□□□ -2.16
NID1P14543 MIR4639-201ENST00000584938 69 ntBASIC1.56□□□□□ -2.16
NID1P14543 SNORA7.1-201ENST00000363750 139 ntBASIC1.55□□□□□ -2.16
NID1P14543 Y_RNA.236-201ENST00000364427 111 ntBASIC1.55□□□□□ -2.16
NID1P14543 SNORD41.1-201ENST00000391000 69 ntBASIC1.55□□□□□ -2.16
NID1P14543 MT-TY-201ENST00000387409 66 ntBASIC1.54□□□□□ -2.16
NID1P14543 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
NID1P14543 AP1B1P2-201ENST00000416196 106 ntBASIC1.54□□□□□ -2.16
NID1P14543 RNA5SP147-201ENST00000516493 109 ntBASIC1.54□□□□□ -2.16
NID1P14543 MIR4460-201ENST00000577862 86 ntBASIC1.54□□□□□ -2.16
NID1P14543 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
NID1P14543 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.54□□□□□ -2.16
NID1P14543 AC244669.1-204ENST00000621564 178 ntBASIC1.54□□□□□ -2.16
NID1P14543 SNORD28-201ENST00000384706 75 ntBASIC1.53□□□□□ -2.16
NID1P14543 MIR499A-201ENST00000384903 122 ntBASIC1.53□□□□□ -2.16
NID1P14543 MIR222-201ENST00000384992 110 ntBASIC1.53□□□□□ -2.16
NID1P14543 RNU6-656P-201ENST00000516785 107 ntBASIC1.53□□□□□ -2.16
NID1P14543 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
NID1P14543 RNU6-990P-201ENST00000364385 104 ntBASIC1.52□□□□□ -2.17
NID1P14543 RNU6-302P-201ENST00000365249 107 ntBASIC1.52□□□□□ -2.17
NID1P14543 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
NID1P14543 MIR6739-201ENST00000622461 75 ntBASIC1.52□□□□□ -2.17
NID1P14543 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NID1P14543 Y_RNA.224-201ENST00000364308 111 ntBASIC1.51□□□□□ -2.17
NID1P14543 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.51□□□□□ -2.17
NID1P14543 RNU6-1089P-201ENST00000516473 104 ntBASIC1.51□□□□□ -2.17
NID1P14543 SNORA40.17-201ENST00000517256 115 ntBASIC1.51□□□□□ -2.17
NID1P14543 SNORD114-4-201ENST00000363962 75 ntBASIC1.5□□□□□ -2.17
NID1P14543 MIR489-201ENST00000384923 84 ntBASIC1.5□□□□□ -2.17
NID1P14543 AC002429.1-201ENST00000437672 148 ntBASIC1.5□□□□□ -2.17
NID1P14543 AC018659.1-201ENST00000551083 169 ntBASIC1.5□□□□□ -2.17
NID1P14543 MIR502-201ENST00000606349 86 ntBASIC1.5□□□□□ -2.17
NID1P14543 Y_RNA.250-201ENST00000364542 110 ntBASIC1.49□□□□□ -2.17
NID1P14543 RNA5SP363-201ENST00000365072 115 ntBASIC1.49□□□□□ -2.17
NID1P14543 RNU6-1110P-201ENST00000516462 101 ntBASIC1.49□□□□□ -2.17
NID1P14543 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NID1P14543 RNU6-726P-201ENST00000364680 107 ntBASIC1.48□□□□□ -2.17
NID1P14543 RNU6-1162P-201ENST00000384443 104 ntBASIC1.48□□□□□ -2.17
NID1P14543 SNORD89-201ENST00000390981 114 ntBASIC1.48□□□□□ -2.17
NID1P14543 MIR548V-201ENST00000584165 80 ntBASIC1.48□□□□□ -2.17
NID1P14543 RNU6-92P-201ENST00000605893 104 ntBASIC1.48□□□□□ -2.17
NID1P14543 SNORD18A-201ENST00000363753 72 ntBASIC1.47□□□□□ -2.17
NID1P14543 RNU1-141P-201ENST00000364623 158 ntBASIC1.47□□□□□ -2.17
NID1P14543 RNU6-716P-201ENST00000365621 103 ntBASIC1.47□□□□□ -2.17
NID1P14543 SNORD105-201ENST00000386910 85 ntBASIC1.47□□□□□ -2.17
NID1P14543 RNU7-95P-201ENST00000459222 64 ntBASIC1.47□□□□□ -2.17
NID1P14543 RNU6-122P-201ENST00000516818 107 ntBASIC1.47□□□□□ -2.17
NID1P14543 RNA5SP47-201ENST00000517230 109 ntBASIC1.47□□□□□ -2.17
NID1P14543 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.46□□□□□ -2.18
NID1P14543 RNU6-997P-201ENST00000384725 107 ntBASIC1.45□□□□□ -2.18
NID1P14543 MIR548C-201ENST00000384815 97 ntBASIC1.45□□□□□ -2.18
NID1P14543 FABP5P4-201ENST00000437203 171 ntBASIC1.45□□□□□ -2.18
NID1P14543 MIR3938-201ENST00000582157 103 ntBASIC1.45□□□□□ -2.18
NID1P14543 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
NID1P14543 RNU6-446P-201ENST00000362827 106 ntBASIC1.44□□□□□ -2.18
NID1P14543 SNORA8.2-201ENST00000384372 139 ntBASIC1.44□□□□□ -2.18
NID1P14543 SNORA25-201ENST00000384384 134 ntBASIC1.44□□□□□ -2.18
NID1P14543 MIR521-2-201ENST00000384818 87 ntBASIC1.44□□□□□ -2.18
NID1P14543 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.44□□□□□ -2.18
NID1P14543 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
NID1P14543 AL157398.1-201ENST00000452981 186 ntBASIC1.44□□□□□ -2.18
NID1P14543 U7.7-201ENST00000459276 60 ntBASIC1.44□□□□□ -2.18
NID1P14543 RNU5B-6P-201ENST00000516765 68 ntBASIC1.44□□□□□ -2.18
NID1P14543 Y_RNA.722-201ENST00000517279 114 ntBASIC1.44□□□□□ -2.18
NID1P14543 RNU6-269P-201ENST00000391077 97 ntBASIC1.43□□□□□ -2.18
NID1P14543 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
NID1P14543 MIR3678-201ENST00000578455 94 ntBASIC1.43□□□□□ -2.18
NID1P14543 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
NID1P14543 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NID1P14543 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
NID1P14543 Y_RNA.327-201ENST00000365201 102 ntBASIC1.42□□□□□ -2.18
NID1P14543 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.42□□□□□ -2.18
NID1P14543 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NID1P14543 SNORA75.1-201ENST00000391130 148 ntBASIC1.41□□□□□ -2.18
NID1P14543 snoU13.13-201ENST00000458842 104 ntBASIC1.41□□□□□ -2.18
NID1P14543 RNA5SP484-201ENST00000458857 111 ntBASIC1.41□□□□□ -2.18
NID1P14543 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.41□□□□□ -2.18
NID1P14543 SCARNA16.5-201ENST00000517114 183 ntBASIC1.41□□□□□ -2.18
NID1P14543 SNORD60.1-201ENST00000362451 73 ntBASIC1.4□□□□□ -2.19
NID1P14543 MIR630-201ENST00000384957 97 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms