Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MT-TY-201ENST00000387409 66 ntBASIC0.23□□□□□ -2.37
HLA-DOBP13765 RNU7-129P-201ENST00000516128 62 ntBASIC0.23□□□□□ -2.37
HLA-DOBP13765 MIR6515-201ENST00000619843 57 ntBASIC0.23□□□□□ -2.37
HLA-DOBP13765 MIR4315-1-201ENST00000636800 73 ntBASIC0.23□□□□□ -2.37
HLA-DOBP13765 MIR4315-2-201ENST00000640925 73 ntBASIC0.23□□□□□ -2.37
HLA-DOBP13765 RNU4-32P-201ENST00000363404 141 ntBASIC0.22□□□□□ -2.37
HLA-DOBP13765 MIR1236-201ENST00000408340 102 ntBASIC0.22□□□□□ -2.37
HLA-DOBP13765 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
HLA-DOBP13765 Y_RNA.125-201ENST00000363371 111 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 SNORD116-22-201ENST00000384430 92 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 MIR501-201ENST00000390204 84 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 RNU6-1232P-201ENST00000516299 86 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 Y_RNA.694-201ENST00000516677 117 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 YWHAEP2-201ENST00000580066 112 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 MIR548AD-201ENST00000584780 82 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 MIR548O2-201ENST00000616090 70 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
HLA-DOBP13765 RNY4P3-201ENST00000365254 95 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 RNA5SP292-201ENST00000390974 118 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 HMGN2P22-201ENST00000427588 175 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 SNORA25.13-201ENST00000516395 103 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 SNORA18.5-201ENST00000516616 101 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 MIR4668-201ENST00000582284 70 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
HLA-DOBP13765 SNORA63.2-201ENST00000362603 126 ntBASIC0.19□□□□□ -2.38
HLA-DOBP13765 MTATP6P29-201ENST00000415057 132 ntBASIC0.19□□□□□ -2.38
HLA-DOBP13765 MIR4677-201ENST00000584153 80 ntBASIC0.19□□□□□ -2.38
HLA-DOBP13765 RNU6-633P-201ENST00000362612 103 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 Y_RNA.355-201ENST00000365462 98 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 RNU6-652P-201ENST00000365488 107 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 RNY1P4-201ENST00000384595 115 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 RNU6-127P-201ENST00000390897 107 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 FGF7P7-201ENST00000514120 227 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 MIR499B-201ENST00000636498 73 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 RNU6-1051P-201ENST00000365471 102 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 RNY1P7-201ENST00000384743 110 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 MIR519C-201ENST00000385053 87 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 Y_RNA.620-201ENST00000411009 88 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 RNU6-782P-201ENST00000516852 104 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 RNU6-844P-201ENST00000517175 102 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 RNU6-1131P-201ENST00000364955 107 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 Y_RNA.407-201ENST00000383986 113 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 RNU6V-201ENST00000384105 107 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 RNU5B-6P-201ENST00000516765 68 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 MIR4796-201ENST00000580742 81 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 MIR4473-201ENST00000583731 91 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 RNU5F-1-201ENST00000362507 117 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 Y_RNA.558-201ENST00000384685 113 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 MIR598-201ENST00000384868 97 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 RNY4P30-201ENST00000410216 95 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 RNU6-1052P-201ENST00000411398 104 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 RNU6-719P-201ENST00000516671 104 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 uc_338.10-201ENST00000621872 182 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 SNORD115-27-201ENST00000364430 82 ntBASIC0.14□□□□□ -2.39
HLA-DOBP13765 RNU6-219P-201ENST00000364728 107 ntBASIC0.14□□□□□ -2.39
HLA-DOBP13765 RNU6-49P-201ENST00000384256 107 ntBASIC0.14□□□□□ -2.39
HLA-DOBP13765 MIR892B-201ENST00000401279 77 ntBASIC0.14□□□□□ -2.39
HLA-DOBP13765 MIR3140-201ENST00000583685 90 ntBASIC0.14□□□□□ -2.39
HLA-DOBP13765 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.14□□□□□ -2.39
HLA-DOBP13765 SNORD114-23-201ENST00000363536 72 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 SNORD115-37-201ENST00000363768 82 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 RNU6-1134P-201ENST00000365156 101 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 Y_RNA.437-201ENST00000384113 113 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 SNORA24B-201ENST00000384176 131 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 MIR610-201ENST00000385139 96 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 MIR516B1-201ENST00000385211 90 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 SNORA75.1-201ENST00000391130 148 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 RNU6-402P-201ENST00000410678 103 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 snoU13.18-201ENST00000459483 104 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 MIR4743-201ENST00000584576 69 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 PVT1_3.1-201ENST00000620853 95 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 MIR643-201ENST00000385267 97 ntBASIC0.12□□□□□ -2.39
HLA-DOBP13765 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
HLA-DOBP13765 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
HLA-DOBP13765 AC084368.1-201ENST00000620935 65 ntBASIC0.12□□□□□ -2.39
HLA-DOBP13765 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
HLA-DOBP13765 SNORD114-4-201ENST00000363962 75 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 RNU6-54P-201ENST00000365563 107 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 RNU6-675P-201ENST00000384236 104 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 RNU6-1177P-201ENST00000391058 104 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 SNORD90-201ENST00000391145 111 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 MIR876-201ENST00000401147 81 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 RNU7-153P-201ENST00000516455 62 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 MIR548AE1-201ENST00000583292 70 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 MIR3925-201ENST00000584674 77 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 AC104408.1-201ENST00000605241 170 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 RNU6-161P-201ENST00000363051 106 ntBASIC0.1□□□□□ -2.39
HLA-DOBP13765 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
HLA-DOBP13765 RNU6-497P-201ENST00000365316 104 ntBASIC0.1□□□□□ -2.39
HLA-DOBP13765 RNU6-154P-201ENST00000384306 106 ntBASIC0.1□□□□□ -2.39
HLA-DOBP13765 Y_RNA.660-201ENST00000516002 120 ntBASIC0.1□□□□□ -2.39
HLA-DOBP13765 Y_RNA.17-201ENST00000362433 111 ntBASIC0.09□□□□□ -2.4
HLA-DOBP13765 RNA5SP325-201ENST00000363756 130 ntBASIC0.09□□□□□ -2.4
HLA-DOBP13765 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
HLA-DOBP13765 SNORD114-29-201ENST00000364819 70 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms