Protein–RNA interactions for Protein: P04156

PRNP, Major prion protein, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRNPP04156 SNORD42B-201ENST00000458893 67 ntBASIC1.49□□□□□ -2.17
PRNPP04156 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
PRNPP04156 RNA5SP299-201ENST00000391203 116 ntBASIC1.48□□□□□ -2.17
PRNPP04156 SCARNA21.1-201ENST00000515996 128 ntBASIC1.48□□□□□ -2.17
PRNPP04156 RNU1-92P-201ENST00000517017 135 ntBASIC1.48□□□□□ -2.17
PRNPP04156 MIR3122-201ENST00000577243 73 ntBASIC1.48□□□□□ -2.17
PRNPP04156 AC012493.3-201ENST00000604494 112 ntBASIC1.48□□□□□ -2.17
PRNPP04156 RNU6-990P-201ENST00000364385 104 ntBASIC1.47□□□□□ -2.17
PRNPP04156 RNU6-1335P-201ENST00000365426 107 ntBASIC1.47□□□□□ -2.17
PRNPP04156 MIR7-2-201ENST00000384970 110 ntBASIC1.47□□□□□ -2.17
PRNPP04156 MIR644A-201ENST00000385262 94 ntBASIC1.47□□□□□ -2.17
PRNPP04156 MIR548L-201ENST00000408303 86 ntBASIC1.47□□□□□ -2.17
PRNPP04156 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.47□□□□□ -2.17
PRNPP04156 SNORD79.1-201ENST00000516069 84 ntBASIC1.47□□□□□ -2.17
PRNPP04156 MIR4781-201ENST00000585250 76 ntBASIC1.47□□□□□ -2.17
PRNPP04156 RNU6-940P-201ENST00000363433 104 ntBASIC1.46□□□□□ -2.18
PRNPP04156 RNU1-78P-201ENST00000391248 165 ntBASIC1.46□□□□□ -2.18
PRNPP04156 MIR4422-201ENST00000581938 83 ntBASIC1.46□□□□□ -2.18
PRNPP04156 RMST_2.1-201ENST00000617263 136 ntBASIC1.46□□□□□ -2.18
PRNPP04156 SNORA2.1-201ENST00000363089 137 ntBASIC1.45□□□□□ -2.18
PRNPP04156 RNA5SP117-201ENST00000365294 118 ntBASIC1.45□□□□□ -2.18
PRNPP04156 MIR1827-201ENST00000408549 66 ntBASIC1.45□□□□□ -2.18
PRNPP04156 RNU6-1053P-201ENST00000515930 101 ntBASIC1.45□□□□□ -2.18
PRNPP04156 MIR548V-201ENST00000584165 80 ntBASIC1.45□□□□□ -2.18
PRNPP04156 RNA5SP363-201ENST00000365072 115 ntBASIC1.44□□□□□ -2.18
PRNPP04156 MIR548C-201ENST00000384815 97 ntBASIC1.44□□□□□ -2.18
PRNPP04156 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
PRNPP04156 MIR4421-201ENST00000578133 69 ntBASIC1.44□□□□□ -2.18
PRNPP04156 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
PRNPP04156 SNORA7.1-201ENST00000363750 139 ntBASIC1.43□□□□□ -2.18
PRNPP04156 RNU7-74P-201ENST00000459104 62 ntBASIC1.43□□□□□ -2.18
PRNPP04156 RNU6-469P-201ENST00000516253 101 ntBASIC1.43□□□□□ -2.18
PRNPP04156 SNORA70.22-201ENST00000517160 124 ntBASIC1.43□□□□□ -2.18
PRNPP04156 MIR4460-201ENST00000577862 86 ntBASIC1.43□□□□□ -2.18
PRNPP04156 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
PRNPP04156 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
PRNPP04156 RNU6-1089P-201ENST00000516473 104 ntBASIC1.42□□□□□ -2.18
PRNPP04156 RNU6-656P-201ENST00000516785 107 ntBASIC1.42□□□□□ -2.18
PRNPP04156 AC244669.1-204ENST00000621564 178 ntBASIC1.42□□□□□ -2.18
PRNPP04156 AC002350.1-201ENST00000490759 375 ntBASIC1.41□□□□□ -2.18
PRNPP04156 RNU6-902P-201ENST00000517212 91 ntBASIC1.41□□□□□ -2.18
PRNPP04156 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.41□□□□□ -2.18
PRNPP04156 RNA5SP215-201ENST00000363440 122 ntBASIC1.4□□□□□ -2.19
PRNPP04156 MT-TY-201ENST00000387409 66 ntBASIC1.4□□□□□ -2.19
PRNPP04156 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.4□□□□□ -2.19
PRNPP04156 SNORA40.17-201ENST00000517256 115 ntBASIC1.4□□□□□ -2.19
PRNPP04156 RNU6-302P-201ENST00000365249 107 ntBASIC1.39□□□□□ -2.19
PRNPP04156 RNU6-716P-201ENST00000365621 103 ntBASIC1.39□□□□□ -2.19
PRNPP04156 snoU13.13-201ENST00000458842 104 ntBASIC1.39□□□□□ -2.19
PRNPP04156 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.39□□□□□ -2.19
PRNPP04156 RNU6-135P-201ENST00000516769 101 ntBASIC1.39□□□□□ -2.19
PRNPP04156 MIR4639-201ENST00000584938 69 ntBASIC1.39□□□□□ -2.19
PRNPP04156 RNU6-446P-201ENST00000362827 106 ntBASIC1.38□□□□□ -2.19
PRNPP04156 SNORD28-201ENST00000384706 75 ntBASIC1.38□□□□□ -2.19
PRNPP04156 SNORD89-201ENST00000390981 114 ntBASIC1.38□□□□□ -2.19
PRNPP04156 SNORA75.1-201ENST00000391130 148 ntBASIC1.38□□□□□ -2.19
PRNPP04156 RNU6-321P-201ENST00000410912 106 ntBASIC1.38□□□□□ -2.19
PRNPP04156 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
PRNPP04156 RNU5B-6P-201ENST00000516765 68 ntBASIC1.38□□□□□ -2.19
PRNPP04156 Y_RNA.722-201ENST00000517279 114 ntBASIC1.38□□□□□ -2.19
PRNPP04156 RNU6-92P-201ENST00000605893 104 ntBASIC1.38□□□□□ -2.19
PRNPP04156 MIR7978-201ENST00000636158 59 ntBASIC1.38□□□□□ -2.19
PRNPP04156 SNORD41.1-201ENST00000391000 69 ntBASIC1.37□□□□□ -2.19
PRNPP04156 AL157398.1-201ENST00000452981 186 ntBASIC1.37□□□□□ -2.19
PRNPP04156 TRMT112P2-201ENST00000512910 132 ntBASIC1.37□□□□□ -2.19
PRNPP04156 RNU6-122P-201ENST00000516818 107 ntBASIC1.37□□□□□ -2.19
PRNPP04156 AC018659.1-201ENST00000551083 169 ntBASIC1.37□□□□□ -2.19
PRNPP04156 AL353770.2-201ENST00000620024 78 ntBASIC1.37□□□□□ -2.19
PRNPP04156 MIR6739-201ENST00000622461 75 ntBASIC1.37□□□□□ -2.19
PRNPP04156 RNU6-1162P-201ENST00000384443 104 ntBASIC1.36□□□□□ -2.19
PRNPP04156 MIR630-201ENST00000384957 97 ntBASIC1.36□□□□□ -2.19
PRNPP04156 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PRNPP04156 RNU1-141P-201ENST00000364623 158 ntBASIC1.35□□□□□ -2.19
PRNPP04156 Y_RNA.327-201ENST00000365201 102 ntBASIC1.35□□□□□ -2.19
PRNPP04156 RNU6-936P-201ENST00000384005 107 ntBASIC1.35□□□□□ -2.19
PRNPP04156 AC002429.1-201ENST00000437672 148 ntBASIC1.35□□□□□ -2.19
PRNPP04156 MIR3938-201ENST00000582157 103 ntBASIC1.35□□□□□ -2.19
PRNPP04156 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
PRNPP04156 SNORD114-4-201ENST00000363962 75 ntBASIC1.34□□□□□ -2.19
PRNPP04156 RNU6-726P-201ENST00000364680 107 ntBASIC1.34□□□□□ -2.19
PRNPP04156 RNU6-997P-201ENST00000384725 107 ntBASIC1.34□□□□□ -2.19
PRNPP04156 SNORD12-201ENST00000391002 90 ntBASIC1.34□□□□□ -2.19
PRNPP04156 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.34□□□□□ -2.19
PRNPP04156 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.33□□□□□ -2.2
PRNPP04156 SNORD60.1-201ENST00000362451 73 ntBASIC1.33□□□□□ -2.2
PRNPP04156 SNORD18A-201ENST00000363753 72 ntBASIC1.33□□□□□ -2.2
PRNPP04156 SNORD105-201ENST00000386910 85 ntBASIC1.33□□□□□ -2.2
PRNPP04156 RNU6-269P-201ENST00000391077 97 ntBASIC1.32□□□□□ -2.2
PRNPP04156 RNA5SP484-201ENST00000458857 111 ntBASIC1.32□□□□□ -2.2
PRNPP04156 AC021146.9-201ENST00000512503 156 ntBASIC1.32□□□□□ -2.2
PRNPP04156 Y_RNA.676-201ENST00000516393 96 ntBASIC1.32□□□□□ -2.2
PRNPP04156 RNA5SP47-201ENST00000517230 109 ntBASIC1.32□□□□□ -2.2
PRNPP04156 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
PRNPP04156 MIR6078-201ENST00000611069 100 ntBASIC1.32□□□□□ -2.2
PRNPP04156 Y_RNA.164-201ENST00000363709 102 ntBASIC1.31□□□□□ -2.2
PRNPP04156 Y_RNA.250-201ENST00000364542 110 ntBASIC1.31□□□□□ -2.2
PRNPP04156 SNORD113-4-201ENST00000364802 75 ntBASIC1.31□□□□□ -2.2
PRNPP04156 RNU6-392P-201ENST00000364926 101 ntBASIC1.31□□□□□ -2.2
PRNPP04156 MIR521-2-201ENST00000384818 87 ntBASIC1.31□□□□□ -2.2
PRNPP04156 RNU6-808P-201ENST00000391233 108 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms