Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR18A-201ENST00000362310 71 ntBASIC1.26□□□□□ -2.21
PDGFAP04085 RNU6-340P-201ENST00000364005 107 ntBASIC1.26□□□□□ -2.21
PDGFAP04085 MIR519E-201ENST00000385075 84 ntBASIC1.26□□□□□ -2.21
PDGFAP04085 RNU6-1177P-201ENST00000391058 104 ntBASIC1.26□□□□□ -2.21
PDGFAP04085 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
PDGFAP04085 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
PDGFAP04085 MIR4661-201ENST00000582720 75 ntBASIC1.26□□□□□ -2.21
PDGFAP04085 MIR4484-201ENST00000582855 83 ntBASIC1.26□□□□□ -2.21
PDGFAP04085 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.26□□□□□ -2.21
PDGFAP04085 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
PDGFAP04085 Y_RNA.532-201ENST00000384590 113 ntBASIC1.25□□□□□ -2.21
PDGFAP04085 Y_RNA.606-201ENST00000410579 103 ntBASIC1.25□□□□□ -2.21
PDGFAP04085 AC074348.1-201ENST00000426503 132 ntBASIC1.25□□□□□ -2.21
PDGFAP04085 SCARNA18B-201ENST00000458806 135 ntBASIC1.25□□□□□ -2.21
PDGFAP04085 SNORD114-27-201ENST00000363766 70 ntBASIC1.24□□□□□ -2.21
PDGFAP04085 RNU6-726P-201ENST00000364680 107 ntBASIC1.24□□□□□ -2.21
PDGFAP04085 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
PDGFAP04085 RNU6-716P-201ENST00000365621 103 ntBASIC1.23□□□□□ -2.21
PDGFAP04085 Y_RNA.545-201ENST00000384652 105 ntBASIC1.23□□□□□ -2.21
PDGFAP04085 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
PDGFAP04085 AL353765.1-201ENST00000605514 183 ntBASIC1.23□□□□□ -2.21
PDGFAP04085 U6.81-201ENST00000612550 106 ntBASIC1.23□□□□□ -2.21
PDGFAP04085 Y_RNA.681-201ENST00000516445 113 ntBASIC1.22□□□□□ -2.21
PDGFAP04085 AC022709.1-201ENST00000615967 87 ntBASIC1.22□□□□□ -2.21
PDGFAP04085 RNU6-824P-201ENST00000363724 104 ntBASIC1.21□□□□□ -2.22
PDGFAP04085 MIR520E-201ENST00000384867 87 ntBASIC1.21□□□□□ -2.22
PDGFAP04085 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
PDGFAP04085 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.21□□□□□ -2.22
PDGFAP04085 Y_RNA.788-201ENST00000622394 112 ntBASIC1.21□□□□□ -2.22
PDGFAP04085 Y_RNA.36-201ENST00000362602 112 ntBASIC1.2□□□□□ -2.22
PDGFAP04085 RNA5SP222-201ENST00000411039 105 ntBASIC1.2□□□□□ -2.22
PDGFAP04085 MIR6515-201ENST00000619843 57 ntBASIC1.2□□□□□ -2.22
PDGFAP04085 MIR6828-201ENST00000636181 60 ntBASIC1.2□□□□□ -2.22
PDGFAP04085 MIR6767-201ENST00000637302 66 ntBASIC1.2□□□□□ -2.22
PDGFAP04085 RNU6-411P-201ENST00000384451 107 ntBASIC1.19□□□□□ -2.22
PDGFAP04085 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.19□□□□□ -2.22
PDGFAP04085 RNU6-274P-201ENST00000459566 107 ntBASIC1.19□□□□□ -2.22
PDGFAP04085 RPS29P1-201ENST00000465274 159 ntBASIC1.19□□□□□ -2.22
PDGFAP04085 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.19□□□□□ -2.22
PDGFAP04085 RNA5SP227-201ENST00000516184 113 ntBASIC1.19□□□□□ -2.22
PDGFAP04085 MIR548O2-201ENST00000616090 70 ntBASIC1.19□□□□□ -2.22
PDGFAP04085 RNU6-154P-201ENST00000384306 106 ntBASIC1.18□□□□□ -2.22
PDGFAP04085 Y_RNA.565-201ENST00000384719 101 ntBASIC1.18□□□□□ -2.22
PDGFAP04085 RNU6-1223P-201ENST00000517124 104 ntBASIC1.18□□□□□ -2.22
PDGFAP04085 MIR3134-201ENST00000579433 74 ntBASIC1.18□□□□□ -2.22
PDGFAP04085 MIR6779-201ENST00000617283 64 ntBASIC1.18□□□□□ -2.22
PDGFAP04085 SNORA8.1-201ENST00000384250 140 ntBASIC1.17□□□□□ -2.22
PDGFAP04085 MIR598-201ENST00000384868 97 ntBASIC1.17□□□□□ -2.22
PDGFAP04085 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
PDGFAP04085 AC073261.1-201ENST00000429409 121 ntBASIC1.17□□□□□ -2.22
PDGFAP04085 RNU6-70P-201ENST00000516438 60 ntBASIC1.17□□□□□ -2.22
PDGFAP04085 RNA5SP94-201ENST00000516917 108 ntBASIC1.17□□□□□ -2.22
PDGFAP04085 MIR4773-1-201ENST00000637203 78 ntBASIC1.17□□□□□ -2.22
PDGFAP04085 SNORA8.2-201ENST00000384372 139 ntBASIC1.16□□□□□ -2.22
PDGFAP04085 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.16□□□□□ -2.22
PDGFAP04085 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.15□□□□□ -2.23
PDGFAP04085 AC093423.1-201ENST00000440817 142 ntBASIC1.15□□□□□ -2.23
PDGFAP04085 RNU6-752P-201ENST00000516376 102 ntBASIC1.15□□□□□ -2.23
PDGFAP04085 RNA5SP268-201ENST00000516828 124 ntBASIC1.15□□□□□ -2.23
PDGFAP04085 MIR4460-201ENST00000577862 86 ntBASIC1.15□□□□□ -2.23
PDGFAP04085 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
PDGFAP04085 PVT1_3.1-201ENST00000620853 95 ntBASIC1.15□□□□□ -2.23
PDGFAP04085 RNU6-382P-201ENST00000365181 106 ntBASIC1.14□□□□□ -2.23
PDGFAP04085 RNU6-269P-201ENST00000391077 97 ntBASIC1.14□□□□□ -2.23
PDGFAP04085 SNORD75.2-201ENST00000408784 58 ntBASIC1.14□□□□□ -2.23
PDGFAP04085 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
PDGFAP04085 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
PDGFAP04085 SNORA36.1-201ENST00000363424 132 ntBASIC1.13□□□□□ -2.23
PDGFAP04085 RNA5SP325-201ENST00000363756 130 ntBASIC1.13□□□□□ -2.23
PDGFAP04085 Y_RNA.258-201ENST00000364613 105 ntBASIC1.13□□□□□ -2.23
PDGFAP04085 RNU1-141P-201ENST00000364623 158 ntBASIC1.13□□□□□ -2.23
PDGFAP04085 MT-TY-201ENST00000387409 66 ntBASIC1.13□□□□□ -2.23
PDGFAP04085 RNU7-24P-201ENST00000458867 62 ntBASIC1.13□□□□□ -2.23
PDGFAP04085 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
PDGFAP04085 MIR3675-201ENST00000583661 73 ntBASIC1.13□□□□□ -2.23
PDGFAP04085 AL162376.1-201ENST00000624117 175 ntBASIC1.13□□□□□ -2.23
PDGFAP04085 RNU6-495P-201ENST00000362995 107 ntBASIC1.12□□□□□ -2.23
PDGFAP04085 SNORA36.2-201ENST00000384004 127 ntBASIC1.12□□□□□ -2.23
PDGFAP04085 RNU6V-201ENST00000384105 107 ntBASIC1.12□□□□□ -2.23
PDGFAP04085 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
PDGFAP04085 MIR151B-201ENST00000584249 96 ntBASIC1.12□□□□□ -2.23
PDGFAP04085 RNU6-330P-201ENST00000363015 107 ntBASIC1.11□□□□□ -2.23
PDGFAP04085 MIR608-201ENST00000384820 100 ntBASIC1.11□□□□□ -2.23
PDGFAP04085 MIR6788-201ENST00000618842 66 ntBASIC1.11□□□□□ -2.23
PDGFAP04085 AC073869.9-201ENST00000641610 120 ntBASIC1.11□□□□□ -2.23
PDGFAP04085 RNU6-54P-201ENST00000365563 107 ntBASIC1.1□□□□□ -2.23
PDGFAP04085 MIR548J-201ENST00000408833 112 ntBASIC1.1□□□□□ -2.23
PDGFAP04085 RNU6-871P-201ENST00000516122 100 ntBASIC1.1□□□□□ -2.23
PDGFAP04085 RNU6-587P-201ENST00000391282 106 ntBASIC1.09□□□□□ -2.23
PDGFAP04085 AL691482.2-201ENST00000457453 84 ntBASIC1.09□□□□□ -2.23
PDGFAP04085 RNA5SP484-201ENST00000458857 111 ntBASIC1.09□□□□□ -2.23
PDGFAP04085 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.09□□□□□ -2.23
PDGFAP04085 MIR7107-201ENST00000611489 80 ntBASIC1.09□□□□□ -2.23
PDGFAP04085 MIR140-201ENST00000385282 100 ntBASIC1.08□□□□□ -2.24
PDGFAP04085 RNA5SP436-201ENST00000516020 115 ntBASIC1.08□□□□□ -2.24
PDGFAP04085 RNU6-523P-201ENST00000516304 54 ntBASIC1.08□□□□□ -2.24
PDGFAP04085 MIR664A-201ENST00000626086 82 ntBASIC1.08□□□□□ -2.24
PDGFAP04085 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
PDGFAP04085 RNU6-1015P-201ENST00000517121 99 ntBASIC1.07□□□□□ -2.24
PDGFAP04085 AC069503.3-201ENST00000618674 145 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 271.1 ms