Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNU6-65P-201ENST00000516332 98 ntBASIC-0.99□□□□□ -2.57
MT-ND4P03905 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.99□□□□□ -2.57
MT-ND4P03905 MIR4536-1-201ENST00000583537 88 ntBASIC-0.99□□□□□ -2.57
MT-ND4P03905 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.99□□□□□ -2.57
MT-ND4P03905 MIR6854-201ENST00000614935 69 ntBASIC-0.99□□□□□ -2.57
MT-ND4P03905 MIR8068-201ENST00000618032 68 ntBASIC-0.99□□□□□ -2.57
MT-ND4P03905 Y_RNA.163-201ENST00000363702 113 ntBASIC-1□□□□□ -2.57
MT-ND4P03905 Y_RNA.246-201ENST00000364495 108 ntBASIC-1□□□□□ -2.57
MT-ND4P03905 SNORD116-18-201ENST00000383961 92 ntBASIC-1□□□□□ -2.57
MT-ND4P03905 RNY1P7-201ENST00000384743 110 ntBASIC-1□□□□□ -2.57
MT-ND4P03905 Y_RNA.580-201ENST00000391004 95 ntBASIC-1□□□□□ -2.57
MT-ND4P03905 MIR548X2-201ENST00000579776 100 ntBASIC-1□□□□□ -2.57
MT-ND4P03905 AC025166.1-201ENST00000612411 163 ntBASIC-1□□□□□ -2.57
MT-ND4P03905 RNU4-36P-201ENST00000364294 144 ntBASIC-1.01□□□□□ -2.57
MT-ND4P03905 SNORD50.2-201ENST00000365465 70 ntBASIC-1.01□□□□□ -2.57
MT-ND4P03905 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.01□□□□□ -2.57
MT-ND4P03905 MIR577-201ENST00000385196 96 ntBASIC-1.01□□□□□ -2.57
MT-ND4P03905 MTND3P2-201ENST00000438452 342 ntBASIC-1.01□□□□□ -2.57
MT-ND4P03905 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.01□□□□□ -2.57
MT-ND4P03905 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.01□□□□□ -2.57
MT-ND4P03905 U7.2-201ENST00000607576 63 ntBASIC-1.01□□□□□ -2.57
MT-ND4P03905 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.02□□□□□ -2.57
MT-ND4P03905 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.02□□□□□ -2.57
MT-ND4P03905 RNU7-85P-201ENST00000458851 63 ntBASIC-1.02□□□□□ -2.57
MT-ND4P03905 RNA5SP395-201ENST00000516567 118 ntBASIC-1.02□□□□□ -2.57
MT-ND4P03905 MIR6773-201ENST00000612812 74 ntBASIC-1.02□□□□□ -2.57
MT-ND4P03905 SNORD58C-201ENST00000365223 64 ntBASIC-1.03□□□□□ -2.57
MT-ND4P03905 MIR196A1-201ENST00000388006 70 ntBASIC-1.03□□□□□ -2.57
MT-ND4P03905 RNU6-394P-201ENST00000410735 107 ntBASIC-1.03□□□□□ -2.57
MT-ND4P03905 AC022137.1-201ENST00000483735 151 ntBASIC-1.03□□□□□ -2.57
MT-ND4P03905 RNU6-200P-201ENST00000364743 107 ntBASIC-1.04□□□□□ -2.58
MT-ND4P03905 MIR517B-201ENST00000385102 67 ntBASIC-1.04□□□□□ -2.58
MT-ND4P03905 AP000533.3-201ENST00000447704 118 ntBASIC-1.04□□□□□ -2.58
MT-ND4P03905 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.04□□□□□ -2.58
MT-ND4P03905 AL513043.2-201ENST00000573941 143 ntBASIC-1.04□□□□□ -2.58
MT-ND4P03905 snoR1.1-201ENST00000628177 80 ntBASIC-1.04□□□□□ -2.58
MT-ND4P03905 SNORA63.6-201ENST00000364921 119 ntBASIC-1.05□□□□□ -2.58
MT-ND4P03905 RNU6-132P-201ENST00000383863 107 ntBASIC-1.05□□□□□ -2.58
MT-ND4P03905 RNU6-592P-201ENST00000411333 103 ntBASIC-1.05□□□□□ -2.58
MT-ND4P03905 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.05□□□□□ -2.58
MT-ND4P03905 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.05□□□□□ -2.58
MT-ND4P03905 MIR4694-201ENST00000578534 80 ntBASIC-1.05□□□□□ -2.58
MT-ND4P03905 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.05□□□□□ -2.58
MT-ND4P03905 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 SNORD74.6-201ENST00000364796 70 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 RNY4P3-201ENST00000365254 95 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 RNU6-905P-201ENST00000384434 107 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 MIRLET7B-201ENST00000385140 83 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 MIR569-201ENST00000385228 96 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 RNU6-337P-201ENST00000391243 106 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 snoU13.19-201ENST00000459148 104 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 MIR3140-201ENST00000583685 90 ntBASIC-1.06□□□□□ -2.58
MT-ND4P03905 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.07□□□□□ -2.58
MT-ND4P03905 SNORA63.2-201ENST00000362603 126 ntBASIC-1.07□□□□□ -2.58
MT-ND4P03905 RNU6-495P-201ENST00000362995 107 ntBASIC-1.07□□□□□ -2.58
MT-ND4P03905 RNU6-832P-201ENST00000363319 107 ntBASIC-1.07□□□□□ -2.58
MT-ND4P03905 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
MT-ND4P03905 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.07□□□□□ -2.58
MT-ND4P03905 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
MT-ND4P03905 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.07□□□□□ -2.58
MT-ND4P03905 MIR548AX-201ENST00000580117 73 ntBASIC-1.07□□□□□ -2.58
MT-ND4P03905 MIR6086-201ENST00000638065 55 ntBASIC-1.07□□□□□ -2.58
MT-ND4P03905 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.08□□□□□ -2.58
MT-ND4P03905 SNORD114-25-201ENST00000363742 72 ntBASIC-1.08□□□□□ -2.58
MT-ND4P03905 SNORD115-23-201ENST00000364461 82 ntBASIC-1.08□□□□□ -2.58
MT-ND4P03905 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.08□□□□□ -2.58
MT-ND4P03905 RNU6-804P-201ENST00000384286 107 ntBASIC-1.08□□□□□ -2.58
MT-ND4P03905 RNU6-30P-201ENST00000384561 107 ntBASIC-1.08□□□□□ -2.58
MT-ND4P03905 RNA5SP272-201ENST00000516095 111 ntBASIC-1.08□□□□□ -2.58
MT-ND4P03905 MIR3613-201ENST00000579844 87 ntBASIC-1.08□□□□□ -2.58
MT-ND4P03905 AC004792.1-201ENST00000614523 137 ntBASIC-1.08□□□□□ -2.58
MT-ND4P03905 AL035470.1-201ENST00000622571 220 ntBASIC-1.08□□□□□ -2.58
MT-ND4P03905 RNY3P2-201ENST00000362918 102 ntBASIC-1.09□□□□□ -2.58
MT-ND4P03905 RNU6-379P-201ENST00000363813 104 ntBASIC-1.09□□□□□ -2.58
MT-ND4P03905 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.09□□□□□ -2.58
MT-ND4P03905 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.09□□□□□ -2.58
MT-ND4P03905 RNU6-990P-201ENST00000364385 104 ntBASIC-1.1□□□□□ -2.59
MT-ND4P03905 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.1□□□□□ -2.59
MT-ND4P03905 RNU6-463P-201ENST00000384340 107 ntBASIC-1.1□□□□□ -2.59
MT-ND4P03905 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.1□□□□□ -2.59
MT-ND4P03905 MIR548U-201ENST00000390728 81 ntBASIC-1.1□□□□□ -2.59
MT-ND4P03905 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.1□□□□□ -2.59
MT-ND4P03905 SCARNA17-201ENST00000516183 144 ntBASIC-1.1□□□□□ -2.59
MT-ND4P03905 MIR3144-201ENST00000579460 79 ntBASIC-1.1□□□□□ -2.59
MT-ND4P03905 MIR3064-201ENST00000581130 66 ntBASIC-1.1□□□□□ -2.59
MT-ND4P03905 RNU6-694P-201ENST00000364071 147 ntBASIC-1.11□□□□□ -2.59
MT-ND4P03905 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.11□□□□□ -2.59
MT-ND4P03905 SNORA24B-201ENST00000384176 131 ntBASIC-1.11□□□□□ -2.59
MT-ND4P03905 SNORD83B-201ENST00000386745 93 ntBASIC-1.11□□□□□ -2.59
MT-ND4P03905 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.11□□□□□ -2.59
MT-ND4P03905 RNU6-388P-201ENST00000517012 105 ntBASIC-1.11□□□□□ -2.59
MT-ND4P03905 RNU6-389P-201ENST00000517048 105 ntBASIC-1.11□□□□□ -2.59
MT-ND4P03905 AC068339.1-201ENST00000526965 141 ntBASIC-1.11□□□□□ -2.59
MT-ND4P03905 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.12□□□□□ -2.59
MT-ND4P03905 RNA5SP67-201ENST00000516422 131 ntBASIC-1.12□□□□□ -2.59
MT-ND4P03905 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.12□□□□□ -2.59
MT-ND4P03905 MIR4679-2-201ENST00000578358 77 ntBASIC-1.12□□□□□ -2.59
MT-ND4P03905 MIR4439-201ENST00000583746 80 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms