Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.88□□□□□ -2.55
RAB3DO95716 SNORD114-4-201ENST00000363962 75 ntBASIC-0.88□□□□□ -2.55
RAB3DO95716 RNU6-973P-201ENST00000364690 107 ntBASIC-0.88□□□□□ -2.55
RAB3DO95716 SNORD2-201ENST00000459163 69 ntBASIC-0.88□□□□□ -2.55
RAB3DO95716 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.88□□□□□ -2.55
RAB3DO95716 RNU6-426P-201ENST00000516464 97 ntBASIC-0.88□□□□□ -2.55
RAB3DO95716 MIR3613-201ENST00000579844 87 ntBASIC-0.88□□□□□ -2.55
RAB3DO95716 AL035470.1-201ENST00000622571 220 ntBASIC-0.88□□□□□ -2.55
RAB3DO95716 RNU6-832P-201ENST00000363319 107 ntBASIC-0.89□□□□□ -2.55
RAB3DO95716 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.89□□□□□ -2.55
RAB3DO95716 AC021146.6-201ENST00000514659 117 ntBASIC-0.89□□□□□ -2.55
RAB3DO95716 AL513043.2-201ENST00000573941 143 ntBASIC-0.89□□□□□ -2.55
RAB3DO95716 MIR4694-201ENST00000578534 80 ntBASIC-0.89□□□□□ -2.55
RAB3DO95716 RNU6-132P-201ENST00000383863 107 ntBASIC-0.9□□□□□ -2.55
RAB3DO95716 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.91□□□□□ -2.56
RAB3DO95716 SNORA13-201ENST00000458790 133 ntBASIC-0.91□□□□□ -2.56
RAB3DO95716 MIR3681-201ENST00000580089 72 ntBASIC-0.91□□□□□ -2.56
RAB3DO95716 MIR3140-201ENST00000583685 90 ntBASIC-0.91□□□□□ -2.56
RAB3DO95716 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.92□□□□□ -2.56
RAB3DO95716 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.92□□□□□ -2.56
RAB3DO95716 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.92□□□□□ -2.56
RAB3DO95716 RNU6-721P-201ENST00000410155 105 ntBASIC-0.92□□□□□ -2.56
RAB3DO95716 MTND4LP9-201ENST00000427694 174 ntBASIC-0.92□□□□□ -2.56
RAB3DO95716 MIR8068-201ENST00000618032 68 ntBASIC-0.92□□□□□ -2.56
RAB3DO95716 AC099654.10-201ENST00000640395 161 ntBASIC-0.92□□□□□ -2.56
RAB3DO95716 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.93□□□□□ -2.56
RAB3DO95716 MIR518B-201ENST00000385127 83 ntBASIC-0.93□□□□□ -2.56
RAB3DO95716 MT-TG-201ENST00000387429 68 ntBASIC-0.93□□□□□ -2.56
RAB3DO95716 RNU6-772P-201ENST00000516042 105 ntBASIC-0.93□□□□□ -2.56
RAB3DO95716 RNA5SP480-201ENST00000516840 109 ntBASIC-0.93□□□□□ -2.56
RAB3DO95716 MIR3179-1-201ENST00000578940 84 ntBASIC-0.93□□□□□ -2.56
RAB3DO95716 MIR3179-2-201ENST00000579107 84 ntBASIC-0.93□□□□□ -2.56
RAB3DO95716 MIR5589-201ENST00000579442 60 ntBASIC-0.93□□□□□ -2.56
RAB3DO95716 MIR3179-3-201ENST00000579566 84 ntBASIC-0.93□□□□□ -2.56
RAB3DO95716 MIR3179-4-201ENST00000617599 84 ntBASIC-0.93□□□□□ -2.56
RAB3DO95716 RNY3P2-201ENST00000362918 102 ntBASIC-0.94□□□□□ -2.56
RAB3DO95716 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.94□□□□□ -2.56
RAB3DO95716 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.94□□□□□ -2.56
RAB3DO95716 MIR224-201ENST00000384889 81 ntBASIC-0.94□□□□□ -2.56
RAB3DO95716 SNORD22.1-201ENST00000516331 125 ntBASIC-0.94□□□□□ -2.56
RAB3DO95716 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.95□□□□□ -2.56
RAB3DO95716 RNU6-881P-201ENST00000516813 102 ntBASIC-0.95□□□□□ -2.56
RAB3DO95716 AC068339.1-201ENST00000526965 141 ntBASIC-0.95□□□□□ -2.56
RAB3DO95716 MIR4679-2-201ENST00000578358 77 ntBASIC-0.95□□□□□ -2.56
RAB3DO95716 MIR6773-201ENST00000612812 74 ntBASIC-0.95□□□□□ -2.56
RAB3DO95716 MIR6854-201ENST00000614935 69 ntBASIC-0.95□□□□□ -2.56
RAB3DO95716 AL157777.2-201ENST00000258070 137 ntBASIC-0.96□□□□□ -2.56
RAB3DO95716 SNORA63.2-201ENST00000362603 126 ntBASIC-0.96□□□□□ -2.56
RAB3DO95716 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.96□□□□□ -2.56
RAB3DO95716 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.96□□□□□ -2.56
RAB3DO95716 MT-TQ-201ENST00000387372 72 ntBASIC-0.96□□□□□ -2.56
RAB3DO95716 RNU6-182P-201ENST00000516970 105 ntBASIC-0.96□□□□□ -2.56
RAB3DO95716 MIR3064-201ENST00000581130 66 ntBASIC-0.96□□□□□ -2.56
RAB3DO95716 AC103810.7-201ENST00000607821 91 ntBASIC-0.96□□□□□ -2.56
RAB3DO95716 RNU6-495P-201ENST00000362995 107 ntBASIC-0.97□□□□□ -2.56
RAB3DO95716 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.97□□□□□ -2.56
RAB3DO95716 RNU6-886P-201ENST00000384319 105 ntBASIC-0.97□□□□□ -2.56
RAB3DO95716 RNU6-337P-201ENST00000391243 106 ntBASIC-0.97□□□□□ -2.56
RAB3DO95716 RNU7-107P-201ENST00000459121 61 ntBASIC-0.97□□□□□ -2.56
RAB3DO95716 AL353621.2-201ENST00000605340 133 ntBASIC-0.97□□□□□ -2.56
RAB3DO95716 RNU6-990P-201ENST00000364385 104 ntBASIC-0.98□□□□□ -2.57
RAB3DO95716 SNORA63.6-201ENST00000364921 119 ntBASIC-0.98□□□□□ -2.57
RAB3DO95716 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.98□□□□□ -2.57
RAB3DO95716 MIR4636-201ENST00000582271 80 ntBASIC-0.98□□□□□ -2.57
RAB3DO95716 snoR1.1-201ENST00000628177 80 ntBASIC-0.98□□□□□ -2.57
RAB3DO95716 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 RNU4-36P-201ENST00000364294 144 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 RNU6-813P-201ENST00000384691 107 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 MIR604-201ENST00000384880 94 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 MIR548U-201ENST00000390728 81 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 RNU6-644P-201ENST00000391155 98 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 SNORD4B-201ENST00000459083 72 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 MIR4439-201ENST00000583746 80 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 MIR548Z-201ENST00000584743 97 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 AC104996.3-201ENST00000590718 94 ntBASIC-0.99□□□□□ -2.57
RAB3DO95716 SNORD45B-201ENST00000364617 72 ntBASIC-1□□□□□ -2.57
RAB3DO95716 SNORA24B-201ENST00000384176 131 ntBASIC-1□□□□□ -2.57
RAB3DO95716 RNU6-905P-201ENST00000384434 107 ntBASIC-1□□□□□ -2.57
RAB3DO95716 MIR517B-201ENST00000385102 67 ntBASIC-1□□□□□ -2.57
RAB3DO95716 MIRLET7B-201ENST00000385140 83 ntBASIC-1□□□□□ -2.57
RAB3DO95716 RNU6-257P-201ENST00000410238 98 ntBASIC-1□□□□□ -2.57
RAB3DO95716 RNU6-592P-201ENST00000411333 103 ntBASIC-1□□□□□ -2.57
RAB3DO95716 AP000533.3-201ENST00000447704 118 ntBASIC-1□□□□□ -2.57
RAB3DO95716 AC022137.1-201ENST00000483735 151 ntBASIC-1□□□□□ -2.57
RAB3DO95716 RNY1P7-201ENST00000384743 110 ntBASIC-1.01□□□□□ -2.57
RAB3DO95716 MIR548A1-201ENST00000385041 97 ntBASIC-1.01□□□□□ -2.57
RAB3DO95716 SNORA40-201ENST00000388090 126 ntBASIC-1.01□□□□□ -2.57
RAB3DO95716 SNORD90-201ENST00000391145 111 ntBASIC-1.01□□□□□ -2.57
RAB3DO95716 RNU4-63P-201ENST00000411313 118 ntBASIC-1.01□□□□□ -2.57
RAB3DO95716 MIR5009-201ENST00000578736 100 ntBASIC-1.01□□□□□ -2.57
RAB3DO95716 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.02□□□□□ -2.57
RAB3DO95716 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.02□□□□□ -2.57
RAB3DO95716 RNA5SP292-201ENST00000390974 118 ntBASIC-1.02□□□□□ -2.57
RAB3DO95716 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.02□□□□□ -2.57
RAB3DO95716 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.02□□□□□ -2.57
RAB3DO95716 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.03□□□□□ -2.57
RAB3DO95716 SNORD115-23-201ENST00000364461 82 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms