Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-656P-201ENST00000516785 107 ntBASIC1.28□□□□□ -2.2
TRIM13O60858 MIR4781-201ENST00000585250 76 ntBASIC1.28□□□□□ -2.2
TRIM13O60858 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.28□□□□□ -2.2
TRIM13O60858 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TRIM13O60858 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
TRIM13O60858 RNA5SP215-201ENST00000363440 122 ntBASIC1.27□□□□□ -2.21
TRIM13O60858 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
TRIM13O60858 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
TRIM13O60858 AC002350.1-201ENST00000490759 375 ntBASIC1.27□□□□□ -2.21
TRIM13O60858 RNU6-135P-201ENST00000516769 101 ntBASIC1.27□□□□□ -2.21
TRIM13O60858 MIR6739-201ENST00000622461 75 ntBASIC1.27□□□□□ -2.21
TRIM13O60858 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
TRIM13O60858 RNU6-446P-201ENST00000362827 106 ntBASIC1.26□□□□□ -2.21
TRIM13O60858 RNU6-990P-201ENST00000364385 104 ntBASIC1.26□□□□□ -2.21
TRIM13O60858 MT-TY-201ENST00000387409 66 ntBASIC1.26□□□□□ -2.21
TRIM13O60858 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
TRIM13O60858 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.26□□□□□ -2.21
TRIM13O60858 MIR4639-201ENST00000584938 69 ntBASIC1.26□□□□□ -2.21
TRIM13O60858 SNORA7.1-201ENST00000363750 139 ntBASIC1.25□□□□□ -2.21
TRIM13O60858 RNU6-1335P-201ENST00000365426 107 ntBASIC1.25□□□□□ -2.21
TRIM13O60858 MIR644A-201ENST00000385262 94 ntBASIC1.25□□□□□ -2.21
TRIM13O60858 MIR4298-201ENST00000584380 73 ntBASIC1.25□□□□□ -2.21
TRIM13O60858 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRIM13O60858 SNORD28-201ENST00000384706 75 ntBASIC1.24□□□□□ -2.21
TRIM13O60858 AL591806.2-201ENST00000433122 173 ntBASIC1.24□□□□□ -2.21
TRIM13O60858 RNU6-1089P-201ENST00000516473 104 ntBASIC1.24□□□□□ -2.21
TRIM13O60858 RNA5SP147-201ENST00000516493 109 ntBASIC1.24□□□□□ -2.21
TRIM13O60858 RNU6-122P-201ENST00000516818 107 ntBASIC1.24□□□□□ -2.21
TRIM13O60858 RNU6-548P-201ENST00000517083 115 ntBASIC1.24□□□□□ -2.21
TRIM13O60858 AC244669.1-204ENST00000621564 178 ntBASIC1.24□□□□□ -2.21
TRIM13O60858 RNA5SP117-201ENST00000365294 118 ntBASIC1.23□□□□□ -2.21
TRIM13O60858 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
TRIM13O60858 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.23□□□□□ -2.21
TRIM13O60858 MIR4460-201ENST00000577862 86 ntBASIC1.23□□□□□ -2.21
TRIM13O60858 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRIM13O60858 Y_RNA.250-201ENST00000364542 110 ntBASIC1.22□□□□□ -2.21
TRIM13O60858 AC104984.5-201ENST00000586878 94 ntBASIC1.22□□□□□ -2.21
TRIM13O60858 RNU6-92P-201ENST00000605893 104 ntBASIC1.22□□□□□ -2.21
TRIM13O60858 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TRIM13O60858 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRIM13O60858 RNU1-141P-201ENST00000364623 158 ntBASIC1.21□□□□□ -2.22
TRIM13O60858 RNU6-726P-201ENST00000364680 107 ntBASIC1.21□□□□□ -2.22
TRIM13O60858 RNU6-302P-201ENST00000365249 107 ntBASIC1.21□□□□□ -2.22
TRIM13O60858 MIR764-201ENST00000390811 85 ntBASIC1.21□□□□□ -2.22
TRIM13O60858 snoU13.23-201ENST00000458863 104 ntBASIC1.21□□□□□ -2.22
TRIM13O60858 AC018659.1-201ENST00000551083 169 ntBASIC1.21□□□□□ -2.22
TRIM13O60858 MIR3938-201ENST00000582157 103 ntBASIC1.21□□□□□ -2.22
TRIM13O60858 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
TRIM13O60858 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRIM13O60858 RNU1-17P-201ENST00000363022 152 ntBASIC1.2□□□□□ -2.22
TRIM13O60858 SNORD18A-201ENST00000363753 72 ntBASIC1.2□□□□□ -2.22
TRIM13O60858 SNORA75.1-201ENST00000391130 148 ntBASIC1.2□□□□□ -2.22
TRIM13O60858 AL157398.1-201ENST00000452981 186 ntBASIC1.2□□□□□ -2.22
TRIM13O60858 AC108210.2-201ENST00000503681 201 ntBASIC1.2□□□□□ -2.22
TRIM13O60858 RNU6-469P-201ENST00000516253 101 ntBASIC1.2□□□□□ -2.22
TRIM13O60858 RNA5SP47-201ENST00000517230 109 ntBASIC1.2□□□□□ -2.22
TRIM13O60858 MIR4303-201ENST00000581299 66 ntBASIC1.2□□□□□ -2.22
TRIM13O60858 MIR7978-201ENST00000636158 59 ntBASIC1.2□□□□□ -2.22
TRIM13O60858 SNORD60.1-201ENST00000362451 73 ntBASIC1.19□□□□□ -2.22
TRIM13O60858 SNORD113-4-201ENST00000364802 75 ntBASIC1.19□□□□□ -2.22
TRIM13O60858 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
TRIM13O60858 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
TRIM13O60858 MIR19B1-201ENST00000384829 87 ntBASIC1.19□□□□□ -2.22
TRIM13O60858 MIR548L-201ENST00000408303 86 ntBASIC1.19□□□□□ -2.22
TRIM13O60858 RNU1-92P-201ENST00000517017 135 ntBASIC1.19□□□□□ -2.22
TRIM13O60858 Y_RNA.722-201ENST00000517279 114 ntBASIC1.19□□□□□ -2.22
TRIM13O60858 AC015712.3-201ENST00000559380 164 ntBASIC1.19□□□□□ -2.22
TRIM13O60858 SNORD114-4-201ENST00000363962 75 ntBASIC1.18□□□□□ -2.22
TRIM13O60858 MIR521-2-201ENST00000384818 87 ntBASIC1.18□□□□□ -2.22
TRIM13O60858 RNU6-1110P-201ENST00000516462 101 ntBASIC1.18□□□□□ -2.22
TRIM13O60858 MIR548V-201ENST00000584165 80 ntBASIC1.18□□□□□ -2.22
TRIM13O60858 RNU6-1162P-201ENST00000384443 104 ntBASIC1.17□□□□□ -2.22
TRIM13O60858 SNORD105-201ENST00000386910 85 ntBASIC1.17□□□□□ -2.22
TRIM13O60858 RNU6-716P-201ENST00000365621 103 ntBASIC1.16□□□□□ -2.22
TRIM13O60858 SNORA8.2-201ENST00000384372 139 ntBASIC1.16□□□□□ -2.22
TRIM13O60858 MIR200A-201ENST00000384875 90 ntBASIC1.16□□□□□ -2.22
TRIM13O60858 SNORD89-201ENST00000390981 114 ntBASIC1.16□□□□□ -2.22
TRIM13O60858 RNU6-269P-201ENST00000391077 97 ntBASIC1.16□□□□□ -2.22
TRIM13O60858 RNU5B-6P-201ENST00000516765 68 ntBASIC1.16□□□□□ -2.22
TRIM13O60858 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.15□□□□□ -2.23
TRIM13O60858 RNU6-808P-201ENST00000391233 108 ntBASIC1.15□□□□□ -2.23
TRIM13O60858 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
TRIM13O60858 FABP5P4-201ENST00000437203 171 ntBASIC1.15□□□□□ -2.23
TRIM13O60858 RNA5SP484-201ENST00000458857 111 ntBASIC1.15□□□□□ -2.23
TRIM13O60858 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.15□□□□□ -2.23
TRIM13O60858 MIR6715A-201ENST00000615929 79 ntBASIC1.15□□□□□ -2.23
TRIM13O60858 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
TRIM13O60858 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
TRIM13O60858 RNU6-936P-201ENST00000384005 107 ntBASIC1.14□□□□□ -2.23
TRIM13O60858 RNU6-1184P-201ENST00000384588 108 ntBASIC1.14□□□□□ -2.23
TRIM13O60858 MIR630-201ENST00000384957 97 ntBASIC1.14□□□□□ -2.23
TRIM13O60858 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.14□□□□□ -2.23
TRIM13O60858 snoU13.13-201ENST00000458842 104 ntBASIC1.14□□□□□ -2.23
TRIM13O60858 U7.7-201ENST00000459276 60 ntBASIC1.14□□□□□ -2.23
TRIM13O60858 SCARNA16.5-201ENST00000517114 183 ntBASIC1.14□□□□□ -2.23
TRIM13O60858 MIR4421-201ENST00000578133 69 ntBASIC1.14□□□□□ -2.23
TRIM13O60858 MIR3678-201ENST00000578455 94 ntBASIC1.14□□□□□ -2.23
TRIM13O60858 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
TRIM13O60858 RNA5SP432-201ENST00000362480 116 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 MIR548C-201ENST00000384815 97 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms