Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MIR644A-201ENST00000385262 94 ntBASIC0.57□□□□□ -2.32
CACNA1FO60840 RNU7-13P-201ENST00000516413 62 ntBASIC0.57□□□□□ -2.32
CACNA1FO60840 Y_RNA.207-201ENST00000364142 106 ntBASIC0.57□□□□□ -2.32
CACNA1FO60840 RNU4-45P-201ENST00000365469 141 ntBASIC0.57□□□□□ -2.32
CACNA1FO60840 Y_RNA.371-201ENST00000365591 113 ntBASIC0.57□□□□□ -2.32
CACNA1FO60840 MIR216B-201ENST00000390186 82 ntBASIC0.57□□□□□ -2.32
CACNA1FO60840 RNA5SP222-201ENST00000411039 105 ntBASIC0.57□□□□□ -2.32
CACNA1FO60840 AC114737.2-201ENST00000421583 173 ntBASIC0.57□□□□□ -2.32
CACNA1FO60840 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CACNA1FO60840 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
CACNA1FO60840 Y_RNA.221-201ENST00000364248 96 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 RNU6-652P-201ENST00000365488 107 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 RNU7-104P-201ENST00000459398 79 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.56□□□□□ -2.32
CACNA1FO60840 MIR4696-201ENST00000581431 70 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 RNU6-787P-201ENST00000384032 107 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 RNU6-291P-201ENST00000384720 107 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 snoU13.17-201ENST00000458802 104 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 HAR1A.1-201ENST00000459583 118 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 AL109933.3-201ENST00000619095 188 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 TRDV1-202ENST00000621643 102 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 AC073869.9-201ENST00000641610 120 ntBASIC0.56□□□□□ -2.32
CACNA1FO60840 MIR451A-201ENST00000385059 72 ntBASIC0.55□□□□□ -2.32
CACNA1FO60840 SNORA18.5-201ENST00000516616 101 ntBASIC0.55□□□□□ -2.32
CACNA1FO60840 MIR4666B-201ENST00000578142 81 ntBASIC0.55□□□□□ -2.32
CACNA1FO60840 MIR3612-201ENST00000579753 87 ntBASIC0.55□□□□□ -2.32
CACNA1FO60840 MIR5588-201ENST00000581890 63 ntBASIC0.55□□□□□ -2.32
CACNA1FO60840 MIR6755-201ENST00000619993 66 ntBASIC0.55□□□□□ -2.32
CACNA1FO60840 MIR3202-2-201ENST00000635980 79 ntBASIC0.55□□□□□ -2.32
CACNA1FO60840 RNU5F-1-201ENST00000362507 117 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 RNU6-161P-201ENST00000363051 106 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 RNU6-1126P-201ENST00000384002 107 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 RNU6-1275P-201ENST00000391087 107 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 RNU6-497P-201ENST00000365316 104 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 RNU6-573P-201ENST00000383938 106 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 RNY1P8-201ENST00000383970 114 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 RNU7-153P-201ENST00000516455 62 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 AC092634.7-201ENST00000621022 103 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 MIR1245B-201ENST00000636115 69 ntBASIC0.54□□□□□ -2.32
CACNA1FO60840 SNORD115-24-201ENST00000363528 82 ntBASIC0.53□□□□□ -2.32
CACNA1FO60840 MIR140-201ENST00000385282 100 ntBASIC0.53□□□□□ -2.32
CACNA1FO60840 RNU6-935P-201ENST00000410371 100 ntBASIC0.53□□□□□ -2.32
CACNA1FO60840 RNU6-402P-201ENST00000410678 103 ntBASIC0.53□□□□□ -2.32
CACNA1FO60840 MIR3064-201ENST00000581130 66 ntBASIC0.53□□□□□ -2.32
CACNA1FO60840 SNORA25.18-201ENST00000607153 114 ntBASIC0.53□□□□□ -2.32
CACNA1FO60840 MIR548BB-201ENST00000626714 66 ntBASIC0.53□□□□□ -2.32
CACNA1FO60840 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CACNA1FO60840 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.52□□□□□ -2.33
CACNA1FO60840 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.52□□□□□ -2.33
CACNA1FO60840 SNORA63.2-201ENST00000362603 126 ntBASIC0.52□□□□□ -2.33
CACNA1FO60840 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.52□□□□□ -2.33
CACNA1FO60840 SNORA25.13-201ENST00000516395 103 ntBASIC0.52□□□□□ -2.33
CACNA1FO60840 RNA5SP395-201ENST00000516567 118 ntBASIC0.52□□□□□ -2.33
CACNA1FO60840 RNU6-1051P-201ENST00000365471 102 ntBASIC0.51□□□□□ -2.33
CACNA1FO60840 RNU6-1124P-201ENST00000384169 107 ntBASIC0.51□□□□□ -2.33
CACNA1FO60840 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.51□□□□□ -2.33
CACNA1FO60840 RNU6-279P-201ENST00000391297 101 ntBASIC0.51□□□□□ -2.33
CACNA1FO60840 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.51□□□□□ -2.33
CACNA1FO60840 RNU6-287P-201ENST00000516230 98 ntBASIC0.51□□□□□ -2.33
CACNA1FO60840 RNU6-1265P-201ENST00000516342 103 ntBASIC0.51□□□□□ -2.33
CACNA1FO60840 AC023932.2-201ENST00000603176 175 ntBASIC0.51□□□□□ -2.33
CACNA1FO60840 AL353765.1-201ENST00000605514 183 ntBASIC0.51□□□□□ -2.33
CACNA1FO60840 RNU6-681P-201ENST00000364012 104 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 SCARNA18B-201ENST00000458806 135 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 SNORA62.5-201ENST00000516634 120 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 RNU6V-201ENST00000384105 107 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 SNORD78.1-201ENST00000390866 65 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 SNORD41.1-201ENST00000391000 69 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 AL450471.1-201ENST00000447509 127 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 RNA5SP47-201ENST00000517230 109 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 MIR3678-201ENST00000578455 94 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 YWHAEP2-201ENST00000580066 112 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 MIR3920-201ENST00000581751 86 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 YWHAEP3-201ENST00000582767 121 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.5□□□□□ -2.33
CACNA1FO60840 RNU6-208P-201ENST00000362431 107 ntBASIC0.49□□□□□ -2.33
CACNA1FO60840 Y_RNA.426-201ENST00000384068 113 ntBASIC0.49□□□□□ -2.33
CACNA1FO60840 MIR519E-201ENST00000385075 84 ntBASIC0.49□□□□□ -2.33
CACNA1FO60840 MIR2113-201ENST00000459007 91 ntBASIC0.49□□□□□ -2.33
CACNA1FO60840 Y_RNA.12-201ENST00000362393 112 ntBASIC0.48□□□□□ -2.33
CACNA1FO60840 RNU6-1229P-201ENST00000364295 107 ntBASIC0.48□□□□□ -2.33
CACNA1FO60840 SNORD115-44-201ENST00000365391 82 ntBASIC0.48□□□□□ -2.33
CACNA1FO60840 Y_RNA.32-201ENST00000362589 110 ntBASIC0.48□□□□□ -2.33
CACNA1FO60840 Y_RNA.423-201ENST00000384057 113 ntBASIC0.48□□□□□ -2.33
CACNA1FO60840 SNORD77.2-201ENST00000391045 68 ntBASIC0.48□□□□□ -2.33
CACNA1FO60840 RNU7-74P-201ENST00000459104 62 ntBASIC0.48□□□□□ -2.33
CACNA1FO60840 RNA5SP94-201ENST00000516917 108 ntBASIC0.48□□□□□ -2.33
CACNA1FO60840 MTRNR2L2-201ENST00000604882 87 ntBASIC0.48□□□□□ -2.33
CACNA1FO60840 MIR1297-201ENST00000637311 77 ntBASIC0.48□□□□□ -2.33
CACNA1FO60840 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CACNA1FO60840 RNA5SP63-201ENST00000391225 112 ntBASIC0.47□□□□□ -2.33
CACNA1FO60840 AC093729.1-201ENST00000513074 128 ntBASIC0.47□□□□□ -2.33
CACNA1FO60840 MIR548AG2-201ENST00000581228 64 ntBASIC0.47□□□□□ -2.33
CACNA1FO60840 MIR3140-201ENST00000583685 90 ntBASIC0.47□□□□□ -2.33
CACNA1FO60840 AC069503.3-201ENST00000618674 145 ntBASIC0.47□□□□□ -2.33
CACNA1FO60840 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
CACNA1FO60840 RNA5SP225-201ENST00000410874 135 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms