Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 RNU6-557P-201ENST00000516842 110 ntBASIC0.82□□□□□ -2.28
HOXA3O43365 PVT1_3.1-201ENST00000620853 95 ntBASIC0.82□□□□□ -2.28
HOXA3O43365 RNA5SP325-201ENST00000363756 130 ntBASIC0.81□□□□□ -2.28
HOXA3O43365 U3.27-201ENST00000391237 200 ntBASIC0.81□□□□□ -2.28
HOXA3O43365 RNA5SP225-201ENST00000410874 135 ntBASIC0.81□□□□□ -2.28
HOXA3O43365 RNU7-74P-201ENST00000459104 62 ntBASIC0.81□□□□□ -2.28
HOXA3O43365 RNA5SP227-201ENST00000516184 113 ntBASIC0.81□□□□□ -2.28
HOXA3O43365 RNU6-1108P-201ENST00000516308 104 ntBASIC0.81□□□□□ -2.28
HOXA3O43365 RNA5SP268-201ENST00000516828 124 ntBASIC0.81□□□□□ -2.28
HOXA3O43365 AC211469.2-201ENST00000605461 205 ntBASIC0.81□□□□□ -2.28
HOXA3O43365 Y_RNA.94-201ENST00000363068 106 ntBASIC0.8□□□□□ -2.28
HOXA3O43365 RNY1P8-201ENST00000383970 114 ntBASIC0.8□□□□□ -2.28
HOXA3O43365 SNORD77.2-201ENST00000391045 68 ntBASIC0.8□□□□□ -2.28
HOXA3O43365 RNA5SP395-201ENST00000516567 118 ntBASIC0.8□□□□□ -2.28
HOXA3O43365 AC103810.9-201ENST00000606688 112 ntBASIC0.8□□□□□ -2.28
HOXA3O43365 RNU6-208P-201ENST00000362431 107 ntBASIC0.79□□□□□ -2.28
HOXA3O43365 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
HOXA3O43365 Y_RNA.264-201ENST00000364665 102 ntBASIC0.79□□□□□ -2.28
HOXA3O43365 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.79□□□□□ -2.28
HOXA3O43365 Y_RNA.660-201ENST00000516002 120 ntBASIC0.79□□□□□ -2.28
HOXA3O43365 RNU5F-1-201ENST00000362507 117 ntBASIC0.78□□□□□ -2.28
HOXA3O43365 RNU6-315P-201ENST00000362666 107 ntBASIC0.78□□□□□ -2.28
HOXA3O43365 RNU6-686P-201ENST00000364839 107 ntBASIC0.78□□□□□ -2.28
HOXA3O43365 MIR140-201ENST00000385282 100 ntBASIC0.78□□□□□ -2.28
HOXA3O43365 RNU6-269P-201ENST00000391077 97 ntBASIC0.78□□□□□ -2.28
HOXA3O43365 MIR4712-201ENST00000583750 82 ntBASIC0.78□□□□□ -2.28
HOXA3O43365 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HOXA3O43365 MIRLET7A1-201ENST00000362295 80 ntBASIC0.77□□□□□ -2.29
HOXA3O43365 Y_RNA.205-201ENST00000364128 113 ntBASIC0.77□□□□□ -2.29
HOXA3O43365 SNORA24B-201ENST00000384176 131 ntBASIC0.77□□□□□ -2.29
HOXA3O43365 RNU6-110P-201ENST00000384508 104 ntBASIC0.77□□□□□ -2.29
HOXA3O43365 MIR216B-201ENST00000390186 82 ntBASIC0.77□□□□□ -2.29
HOXA3O43365 RNU6-279P-201ENST00000391297 101 ntBASIC0.77□□□□□ -2.29
HOXA3O43365 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
HOXA3O43365 MIR373-201ENST00000362273 69 ntBASIC0.76□□□□□ -2.29
HOXA3O43365 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
HOXA3O43365 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
HOXA3O43365 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
HOXA3O43365 MIR6857-201ENST00000613267 93 ntBASIC0.76□□□□□ -2.29
HOXA3O43365 AL162376.1-201ENST00000624117 175 ntBASIC0.76□□□□□ -2.29
HOXA3O43365 RNA5SP517-201ENST00000364724 117 ntBASIC0.75□□□□□ -2.29
HOXA3O43365 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
HOXA3O43365 SNORA8.2-201ENST00000384372 139 ntBASIC0.75□□□□□ -2.29
HOXA3O43365 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.75□□□□□ -2.29
HOXA3O43365 AC093423.1-201ENST00000440817 142 ntBASIC0.75□□□□□ -2.29
HOXA3O43365 RNU6-857P-201ENST00000515893 110 ntBASIC0.75□□□□□ -2.29
HOXA3O43365 MIR5000-201ENST00000577717 103 ntBASIC0.75□□□□□ -2.29
HOXA3O43365 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
HOXA3O43365 RNU1-141P-201ENST00000364623 158 ntBASIC0.74□□□□□ -2.29
HOXA3O43365 RNU6-24P-201ENST00000384440 107 ntBASIC0.74□□□□□ -2.29
HOXA3O43365 AC097510.1-201ENST00000510945 133 ntBASIC0.74□□□□□ -2.29
HOXA3O43365 MIR4698-201ENST00000577795 80 ntBASIC0.74□□□□□ -2.29
HOXA3O43365 RN7SL793P-201ENST00000583259 296 ntBASIC0.74□□□□□ -2.29
HOXA3O43365 MIR7107-201ENST00000611489 80 ntBASIC0.74□□□□□ -2.29
HOXA3O43365 AC092634.7-201ENST00000621022 103 ntBASIC0.74□□□□□ -2.29
HOXA3O43365 Y_RNA.12-201ENST00000362393 112 ntBASIC0.73□□□□□ -2.29
HOXA3O43365 RNU6-1094P-201ENST00000362416 104 ntBASIC0.73□□□□□ -2.29
HOXA3O43365 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
HOXA3O43365 RNU6-1177P-201ENST00000391058 104 ntBASIC0.73□□□□□ -2.29
HOXA3O43365 RNU6-380P-201ENST00000410207 107 ntBASIC0.73□□□□□ -2.29
HOXA3O43365 RPL39P28-201ENST00000465655 155 ntBASIC0.73□□□□□ -2.29
HOXA3O43365 YWHAEP2-201ENST00000580066 112 ntBASIC0.73□□□□□ -2.29
HOXA3O43365 YWHAEP3-201ENST00000582767 121 ntBASIC0.73□□□□□ -2.29
HOXA3O43365 MIR548O2-201ENST00000616090 70 ntBASIC0.73□□□□□ -2.29
HOXA3O43365 Y_RNA.371-201ENST00000365591 113 ntBASIC0.72□□□□□ -2.29
HOXA3O43365 MIR216A-201ENST00000385063 110 ntBASIC0.72□□□□□ -2.29
HOXA3O43365 RNU2-59P-201ENST00000410482 191 ntBASIC0.72□□□□□ -2.29
HOXA3O43365 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
HOXA3O43365 MIR4460-201ENST00000577862 86 ntBASIC0.72□□□□□ -2.29
HOXA3O43365 RNU6-638P-201ENST00000516582 104 ntBASIC0.71□□□□□ -2.3
HOXA3O43365 RNU6-824P-201ENST00000363724 104 ntBASIC0.7□□□□□ -2.3
HOXA3O43365 RNU6-340P-201ENST00000364005 107 ntBASIC0.7□□□□□ -2.3
HOXA3O43365 MT-TY-201ENST00000387409 66 ntBASIC0.7□□□□□ -2.3
HOXA3O43365 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
HOXA3O43365 Y_RNA.606-201ENST00000410579 103 ntBASIC0.7□□□□□ -2.3
HOXA3O43365 RNA5SP484-201ENST00000458857 111 ntBASIC0.7□□□□□ -2.3
HOXA3O43365 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
HOXA3O43365 SNORD118-201ENST00000363593 134 ntBASIC0.69□□□□□ -2.3
HOXA3O43365 Y_RNA.244-201ENST00000364484 109 ntBASIC0.69□□□□□ -2.3
HOXA3O43365 SNORA40.8-201ENST00000411034 126 ntBASIC0.69□□□□□ -2.3
HOXA3O43365 AC069271.1-201ENST00000445577 156 ntBASIC0.69□□□□□ -2.3
HOXA3O43365 RNA5SP436-201ENST00000516020 115 ntBASIC0.69□□□□□ -2.3
HOXA3O43365 NAMPTP3-201ENST00000569273 224 ntBASIC0.69□□□□□ -2.3
HOXA3O43365 SNORA25.18-201ENST00000607153 114 ntBASIC0.69□□□□□ -2.3
HOXA3O43365 RNU6V-201ENST00000384105 107 ntBASIC0.68□□□□□ -2.3
HOXA3O43365 RNU6-303P-201ENST00000517091 106 ntBASIC0.68□□□□□ -2.3
HOXA3O43365 AC073869.9-201ENST00000641610 120 ntBASIC0.68□□□□□ -2.3
HOXA3O43365 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
HOXA3O43365 RNU6-681P-201ENST00000364012 104 ntBASIC0.67□□□□□ -2.3
HOXA3O43365 Y_RNA.258-201ENST00000364613 105 ntBASIC0.67□□□□□ -2.3
HOXA3O43365 Y_RNA.374-201ENST00000365606 101 ntBASIC0.67□□□□□ -2.3
HOXA3O43365 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.67□□□□□ -2.3
HOXA3O43365 MIR4752-201ENST00000579672 72 ntBASIC0.67□□□□□ -2.3
HOXA3O43365 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
HOXA3O43365 U6.81-201ENST00000612550 106 ntBASIC0.67□□□□□ -2.3
HOXA3O43365 RNU6-495P-201ENST00000362995 107 ntBASIC0.66□□□□□ -2.3
HOXA3O43365 RNU6-382P-201ENST00000365181 106 ntBASIC0.66□□□□□ -2.3
HOXA3O43365 RNU6-54P-201ENST00000365563 107 ntBASIC0.66□□□□□ -2.3
HOXA3O43365 MIR518A1-201ENST00000385068 85 ntBASIC0.66□□□□□ -2.3
HOXA3O43365 RNU5B-6P-201ENST00000516765 68 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms