Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 MIR7-2-201ENST00000384970 110 ntBASIC1.9□□□□□ -2.11
SPTLC1O15269 MIR4255-201ENST00000579351 72 ntBASIC1.9□□□□□ -2.11
SPTLC1O15269 MIR3657-201ENST00000584818 117 ntBASIC1.9□□□□□ -2.11
SPTLC1O15269 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPTLC1O15269 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTLC1O15269 RNU6-829P-201ENST00000363700 112 ntBASIC1.89□□□□□ -2.11
SPTLC1O15269 MIR216B-201ENST00000390186 82 ntBASIC1.89□□□□□ -2.11
SPTLC1O15269 SNORD42B-201ENST00000458893 67 ntBASIC1.89□□□□□ -2.11
SPTLC1O15269 RNU6-542P-201ENST00000516405 103 ntBASIC1.89□□□□□ -2.11
SPTLC1O15269 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
SPTLC1O15269 BX248123.2-201ENST00000606318 124 ntBASIC1.89□□□□□ -2.11
SPTLC1O15269 RNU6-645P-201ENST00000364649 106 ntBASIC1.88□□□□□ -2.11
SPTLC1O15269 Y_RNA.375-201ENST00000365625 101 ntBASIC1.88□□□□□ -2.11
SPTLC1O15269 RNU6-260P-201ENST00000384092 107 ntBASIC1.88□□□□□ -2.11
SPTLC1O15269 RNU1-123P-201ENST00000458950 160 ntBASIC1.88□□□□□ -2.11
SPTLC1O15269 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
SPTLC1O15269 RNU6-1079P-201ENST00000362861 110 ntBASIC1.87□□□□□ -2.11
SPTLC1O15269 RNA5SP192-201ENST00000364404 120 ntBASIC1.87□□□□□ -2.11
SPTLC1O15269 FABP5P4-201ENST00000437203 171 ntBASIC1.87□□□□□ -2.11
SPTLC1O15269 AC067863.3-201ENST00000624172 122 ntBASIC1.87□□□□□ -2.11
SPTLC1O15269 RNU6V-201ENST00000384105 107 ntBASIC1.86□□□□□ -2.11
SPTLC1O15269 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SPTLC1O15269 SNORD89-201ENST00000390981 114 ntBASIC1.86□□□□□ -2.11
SPTLC1O15269 RNU6-469P-201ENST00000516253 101 ntBASIC1.86□□□□□ -2.11
SPTLC1O15269 RNU6-135P-201ENST00000516769 101 ntBASIC1.86□□□□□ -2.11
SPTLC1O15269 MIR466-201ENST00000580653 84 ntBASIC1.86□□□□□ -2.11
SPTLC1O15269 MIR6504-201ENST00000613520 61 ntBASIC1.86□□□□□ -2.11
SPTLC1O15269 RNA5SP327-201ENST00000362494 101 ntBASIC1.85□□□□□ -2.11
SPTLC1O15269 SNORA25.5-201ENST00000363782 126 ntBASIC1.85□□□□□ -2.11
SPTLC1O15269 MIR644A-201ENST00000385262 94 ntBASIC1.85□□□□□ -2.11
SPTLC1O15269 MIR1276-201ENST00000408707 83 ntBASIC1.85□□□□□ -2.11
SPTLC1O15269 RNU6-1110P-201ENST00000516462 101 ntBASIC1.85□□□□□ -2.11
SPTLC1O15269 RNA5SP147-201ENST00000516493 109 ntBASIC1.85□□□□□ -2.11
SPTLC1O15269 MIR4303-201ENST00000581299 66 ntBASIC1.85□□□□□ -2.11
SPTLC1O15269 MIR502-201ENST00000606349 86 ntBASIC1.85□□□□□ -2.11
SPTLC1O15269 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SPTLC1O15269 Y_RNA.236-201ENST00000364427 111 ntBASIC1.84□□□□□ -2.11
SPTLC1O15269 RNU6-392P-201ENST00000364926 101 ntBASIC1.84□□□□□ -2.11
SPTLC1O15269 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SPTLC1O15269 RNU7-95P-201ENST00000459222 64 ntBASIC1.84□□□□□ -2.11
SPTLC1O15269 AC002350.1-201ENST00000490759 375 ntBASIC1.84□□□□□ -2.11
SPTLC1O15269 RNU6-990P-201ENST00000364385 104 ntBASIC1.83□□□□□ -2.12
SPTLC1O15269 SNORD48-201ENST00000364953 64 ntBASIC1.83□□□□□ -2.12
SPTLC1O15269 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SPTLC1O15269 Y_RNA.327-201ENST00000365201 102 ntBASIC1.82□□□□□ -2.12
SPTLC1O15269 U7.7-201ENST00000459276 60 ntBASIC1.82□□□□□ -2.12
SPTLC1O15269 Y_RNA.540-201ENST00000384638 111 ntBASIC1.81□□□□□ -2.12
SPTLC1O15269 SNORD105-201ENST00000386910 85 ntBASIC1.81□□□□□ -2.12
SPTLC1O15269 RNA5SP299-201ENST00000391203 116 ntBASIC1.81□□□□□ -2.12
SPTLC1O15269 SCARNA21.1-201ENST00000515996 128 ntBASIC1.81□□□□□ -2.12
SPTLC1O15269 SNORA40.17-201ENST00000517256 115 ntBASIC1.81□□□□□ -2.12
SPTLC1O15269 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.8□□□□□ -2.12
SPTLC1O15269 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SPTLC1O15269 RNU7-74P-201ENST00000459104 62 ntBASIC1.79□□□□□ -2.12
SPTLC1O15269 RNU6-656P-201ENST00000516785 107 ntBASIC1.79□□□□□ -2.12
SPTLC1O15269 AC244669.1-204ENST00000621564 178 ntBASIC1.79□□□□□ -2.12
SPTLC1O15269 SNORA2.1-201ENST00000363089 137 ntBASIC1.77□□□□□ -2.13
SPTLC1O15269 RNU6-940P-201ENST00000363433 104 ntBASIC1.77□□□□□ -2.13
SPTLC1O15269 SNORA7.1-201ENST00000363750 139 ntBASIC1.77□□□□□ -2.13
SPTLC1O15269 RNU6-42P-201ENST00000384165 107 ntBASIC1.77□□□□□ -2.13
SPTLC1O15269 MIR548L-201ENST00000408303 86 ntBASIC1.77□□□□□ -2.13
SPTLC1O15269 MIR4639-201ENST00000584938 69 ntBASIC1.77□□□□□ -2.13
SPTLC1O15269 RNU6-446P-201ENST00000362827 106 ntBASIC1.76□□□□□ -2.13
SPTLC1O15269 MIR200A-201ENST00000384875 90 ntBASIC1.76□□□□□ -2.13
SPTLC1O15269 RNA5SP480-201ENST00000516840 109 ntBASIC1.76□□□□□ -2.13
SPTLC1O15269 MIR4460-201ENST00000577862 86 ntBASIC1.76□□□□□ -2.13
SPTLC1O15269 RNU6-1335P-201ENST00000365426 107 ntBASIC1.75□□□□□ -2.13
SPTLC1O15269 SNORD28-201ENST00000384706 75 ntBASIC1.75□□□□□ -2.13
SPTLC1O15269 MT-TY-201ENST00000387409 66 ntBASIC1.75□□□□□ -2.13
SPTLC1O15269 RNU6-1089P-201ENST00000516473 104 ntBASIC1.75□□□□□ -2.13
SPTLC1O15269 MIR548V-201ENST00000584165 80 ntBASIC1.75□□□□□ -2.13
SPTLC1O15269 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
SPTLC1O15269 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SPTLC1O15269 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
SPTLC1O15269 MIR19B1-201ENST00000384829 87 ntBASIC1.74□□□□□ -2.13
SPTLC1O15269 SNORD41.1-201ENST00000391000 69 ntBASIC1.74□□□□□ -2.13
SPTLC1O15269 RNA5SP220-201ENST00000516298 104 ntBASIC1.74□□□□□ -2.13
SPTLC1O15269 SNORD53B-201ENST00000577887 78 ntBASIC1.74□□□□□ -2.13
SPTLC1O15269 MIR4452-201ENST00000583004 71 ntBASIC1.74□□□□□ -2.13
SPTLC1O15269 AC025627.3-201ENST00000582078 182 ntBASIC1.73□□□□□ -2.13
SPTLC1O15269 MIR6739-201ENST00000622461 75 ntBASIC1.73□□□□□ -2.13
SPTLC1O15269 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.72□□□□□ -2.13
SPTLC1O15269 RNA5SP215-201ENST00000363440 122 ntBASIC1.72□□□□□ -2.13
SPTLC1O15269 snoU13.13-201ENST00000458842 104 ntBASIC1.72□□□□□ -2.13
SPTLC1O15269 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.72□□□□□ -2.13
SPTLC1O15269 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.72□□□□□ -2.13
SPTLC1O15269 RNU5B-6P-201ENST00000516765 68 ntBASIC1.72□□□□□ -2.13
SPTLC1O15269 RNU6-716P-201ENST00000365621 103 ntBASIC1.71□□□□□ -2.14
SPTLC1O15269 MIR548C-201ENST00000384815 97 ntBASIC1.71□□□□□ -2.14
SPTLC1O15269 SNORA75.1-201ENST00000391130 148 ntBASIC1.71□□□□□ -2.14
SPTLC1O15269 MIR7978-201ENST00000636158 59 ntBASIC1.71□□□□□ -2.14
SPTLC1O15269 RNU1-141P-201ENST00000364623 158 ntBASIC1.7□□□□□ -2.14
SPTLC1O15269 RNU6-726P-201ENST00000364680 107 ntBASIC1.7□□□□□ -2.14
SPTLC1O15269 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
SPTLC1O15269 SNORD124-201ENST00000459577 104 ntBASIC1.7□□□□□ -2.14
SPTLC1O15269 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.7□□□□□ -2.14
SPTLC1O15269 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.7□□□□□ -2.14
SPTLC1O15269 MIR6734-201ENST00000621166 68 ntBASIC1.7□□□□□ -2.14
SPTLC1O15269 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
SPTLC1O15269 RNU1-42P-201ENST00000364033 160 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 312.5 ms