Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 MIR451A-201ENST00000385059 72 ntBASIC0.11□□□□□ -2.39
TRIM49BA6NDI0 SNORD4B-201ENST00000459083 72 ntBASIC0.11□□□□□ -2.39
TRIM49BA6NDI0 YWHAEP2-201ENST00000580066 112 ntBASIC0.11□□□□□ -2.39
TRIM49BA6NDI0 RNU6-54P-201ENST00000365563 107 ntBASIC0.1□□□□□ -2.39
TRIM49BA6NDI0 RNU6-147P-201ENST00000383983 107 ntBASIC0.1□□□□□ -2.39
TRIM49BA6NDI0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
TRIM49BA6NDI0 RNU6-887P-201ENST00000410660 100 ntBASIC0.1□□□□□ -2.39
TRIM49BA6NDI0 AL035461.1-201ENST00000421490 332 ntBASIC0.1□□□□□ -2.39
TRIM49BA6NDI0 RNU6-762P-201ENST00000517107 102 ntBASIC0.1□□□□□ -2.39
TRIM49BA6NDI0 MIR4439-201ENST00000583746 80 ntBASIC0.1□□□□□ -2.39
TRIM49BA6NDI0 MIR548AD-201ENST00000584780 82 ntBASIC0.1□□□□□ -2.39
TRIM49BA6NDI0 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
TRIM49BA6NDI0 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
TRIM49BA6NDI0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
TRIM49BA6NDI0 Y_RNA.10-201ENST00000362371 110 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 Y_RNA.125-201ENST00000363371 111 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 RNU4-32P-201ENST00000363404 141 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 SNORD115-44-201ENST00000365391 82 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 MIR488-201ENST00000365739 83 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 RNU6-1081P-201ENST00000384537 107 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 AL031737.1-201ENST00000450125 223 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 FGF7P7-201ENST00000514120 227 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 Y_RNA.705-201ENST00000516862 110 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 MIR4460-201ENST00000577862 86 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 MIR3064-201ENST00000581130 66 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 MIR4536-1-201ENST00000583537 88 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 AC073869.9-201ENST00000641610 120 ntBASIC0.09□□□□□ -2.4
TRIM49BA6NDI0 RNU6-509P-201ENST00000363519 107 ntBASIC0.08□□□□□ -2.4
TRIM49BA6NDI0 SNORD115-27-201ENST00000364430 82 ntBASIC0.08□□□□□ -2.4
TRIM49BA6NDI0 RNU6V-201ENST00000384105 107 ntBASIC0.08□□□□□ -2.4
TRIM49BA6NDI0 Y_RNA.609-201ENST00000410669 89 ntBASIC0.08□□□□□ -2.4
TRIM49BA6NDI0 RNU6-65P-201ENST00000516332 98 ntBASIC0.08□□□□□ -2.4
TRIM49BA6NDI0 RNU6-919P-201ENST00000516731 104 ntBASIC0.08□□□□□ -2.4
TRIM49BA6NDI0 MIR5190-201ENST00000581537 80 ntBASIC0.08□□□□□ -2.4
TRIM49BA6NDI0 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.08□□□□□ -2.4
TRIM49BA6NDI0 RNU6-640P-201ENST00000363693 105 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 RNU6-755P-201ENST00000364400 103 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 MIR516B1-201ENST00000385211 90 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 MT-TY-201ENST00000387409 66 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 RNU6-935P-201ENST00000410371 100 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 RNU6-519P-201ENST00000410590 108 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 MTATP8P2-201ENST00000435212 202 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 Y_RNA.681-201ENST00000516445 113 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 RN7SL660P-201ENST00000614852 299 ntBASIC0.07□□□□□ -2.4
TRIM49BA6NDI0 SNORA42.1-201ENST00000363515 137 ntBASIC0.06□□□□□ -2.4
TRIM49BA6NDI0 Y_RNA.348-201ENST00000365403 103 ntBASIC0.06□□□□□ -2.4
TRIM49BA6NDI0 MIR145-201ENST00000384967 88 ntBASIC0.06□□□□□ -2.4
TRIM49BA6NDI0 AC097510.1-201ENST00000510945 133 ntBASIC0.06□□□□□ -2.4
TRIM49BA6NDI0 SNORA25.13-201ENST00000516395 103 ntBASIC0.06□□□□□ -2.4
TRIM49BA6NDI0 RNU7-188P-201ENST00000517063 64 ntBASIC0.06□□□□□ -2.4
TRIM49BA6NDI0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.06□□□□□ -2.4
TRIM49BA6NDI0 MIR5706-201ENST00000579841 80 ntBASIC0.06□□□□□ -2.4
TRIM49BA6NDI0 AC104996.3-201ENST00000590718 94 ntBASIC0.06□□□□□ -2.4
TRIM49BA6NDI0 RNU6-161P-201ENST00000363051 106 ntBASIC0.05□□□□□ -2.4
TRIM49BA6NDI0 RNU6-905P-201ENST00000384434 107 ntBASIC0.05□□□□□ -2.4
TRIM49BA6NDI0 RNY1P7-201ENST00000384743 110 ntBASIC0.05□□□□□ -2.4
TRIM49BA6NDI0 RNA5SP163-201ENST00000410304 99 ntBASIC0.05□□□□□ -2.4
TRIM49BA6NDI0 SNORD42B-201ENST00000458893 67 ntBASIC0.05□□□□□ -2.4
TRIM49BA6NDI0 RNU7-153P-201ENST00000516455 62 ntBASIC0.05□□□□□ -2.4
TRIM49BA6NDI0 AP001318.4-201ENST00000616637 121 ntBASIC0.05□□□□□ -2.4
TRIM49BA6NDI0 AC069503.3-201ENST00000618674 145 ntBASIC0.05□□□□□ -2.4
TRIM49BA6NDI0 Y_RNA.93-201ENST00000363066 109 ntBASIC0.04□□□□□ -2.4
TRIM49BA6NDI0 Y_RNA.239-201ENST00000364444 113 ntBASIC0.04□□□□□ -2.4
TRIM49BA6NDI0 RNU6-929P-201ENST00000384429 107 ntBASIC0.04□□□□□ -2.4
TRIM49BA6NDI0 RNU6-972P-201ENST00000391208 107 ntBASIC0.04□□□□□ -2.4
TRIM49BA6NDI0 MIR548O2-201ENST00000616090 70 ntBASIC0.04□□□□□ -2.4
TRIM49BA6NDI0 Y_RNA.818-201ENST00000618813 71 ntBASIC0.04□□□□□ -2.4
TRIM49BA6NDI0 RNU6-811P-201ENST00000384069 107 ntBASIC0.03□□□□□ -2.4
TRIM49BA6NDI0 Y_RNA.491-201ENST00000384417 107 ntBASIC0.03□□□□□ -2.4
TRIM49BA6NDI0 Y_RNA.495-201ENST00000384435 112 ntBASIC0.03□□□□□ -2.4
TRIM49BA6NDI0 RNU7-74P-201ENST00000459104 62 ntBASIC0.03□□□□□ -2.4
TRIM49BA6NDI0 SNORA18.5-201ENST00000516616 101 ntBASIC0.03□□□□□ -2.4
TRIM49BA6NDI0 RNU6-782P-201ENST00000516852 104 ntBASIC0.03□□□□□ -2.4
TRIM49BA6NDI0 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
TRIM49BA6NDI0 MIR582-201ENST00000365731 98 ntBASIC0.02□□□□□ -2.41
TRIM49BA6NDI0 RNU6-154P-201ENST00000384306 106 ntBASIC0.02□□□□□ -2.41
TRIM49BA6NDI0 MIR652-201ENST00000385278 98 ntBASIC0.02□□□□□ -2.41
TRIM49BA6NDI0 RNU6-175P-201ENST00000516896 107 ntBASIC0.02□□□□□ -2.41
TRIM49BA6NDI0 MIR548AI-201ENST00000579940 88 ntBASIC0.02□□□□□ -2.41
TRIM49BA6NDI0 MALAT1.1-201ENST00000618249 95 ntBASIC0.02□□□□□ -2.41
TRIM49BA6NDI0 MIR6514-201ENST00000622549 70 ntBASIC0.02□□□□□ -2.41
TRIM49BA6NDI0 Y_RNA.437-201ENST00000384113 113 ntBASIC0.01□□□□□ -2.41
TRIM49BA6NDI0 SNORA24B-201ENST00000384176 131 ntBASIC0.01□□□□□ -2.41
TRIM49BA6NDI0 RNU6-1113P-201ENST00000384348 107 ntBASIC0.01□□□□□ -2.41
TRIM49BA6NDI0 RNU6-848P-201ENST00000515948 107 ntBASIC0.01□□□□□ -2.41
TRIM49BA6NDI0 RNU6-617P-201ENST00000516147 107 ntBASIC0.01□□□□□ -2.41
TRIM49BA6NDI0 RNU6-473P-201ENST00000516164 107 ntBASIC0.01□□□□□ -2.41
TRIM49BA6NDI0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.01□□□□□ -2.41
TRIM49BA6NDI0 RNU6-267P-201ENST00000516714 103 ntBASIC0.01□□□□□ -2.41
TRIM49BA6NDI0 AC084368.1-201ENST00000620935 65 ntBASIC0.01□□□□□ -2.41
TRIM49BA6NDI0 Y_RNA.68-201ENST00000362881 102 ntBASIC0□□□□□ -2.41
TRIM49BA6NDI0 SNORD116-10-201ENST00000363791 102 ntBASIC0□□□□□ -2.41
TRIM49BA6NDI0 Y_RNA.544-201ENST00000384650 113 ntBASIC0□□□□□ -2.41
TRIM49BA6NDI0 MIR876-201ENST00000401147 81 ntBASIC0□□□□□ -2.41
TRIM49BA6NDI0 snoU13.17-201ENST00000458802 104 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms