Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.14□□□□□ -2.59
SYCE3A1L190 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.14□□□□□ -2.59
SYCE3A1L190 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.15□□□□□ -2.59
SYCE3A1L190 SNORD58C-201ENST00000365223 64 ntBASIC-1.15□□□□□ -2.59
SYCE3A1L190 RNU6-762P-201ENST00000517107 102 ntBASIC-1.15□□□□□ -2.59
SYCE3A1L190 MTND5P18-201ENST00000445624 1801 ntBASIC-1.16□□□□□ -2.6
SYCE3A1L190 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.16□□□□□ -2.6
SYCE3A1L190 RNU6-973P-201ENST00000364690 107 ntBASIC-1.16□□□□□ -2.6
SYCE3A1L190 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.16□□□□□ -2.6
SYCE3A1L190 MIR569-201ENST00000385228 96 ntBASIC-1.16□□□□□ -2.6
SYCE3A1L190 SNORA13-201ENST00000458790 133 ntBASIC-1.16□□□□□ -2.6
SYCE3A1L190 AC021146.6-201ENST00000514659 117 ntBASIC-1.16□□□□□ -2.6
SYCE3A1L190 SNORD38.3-201ENST00000516599 73 ntBASIC-1.16□□□□□ -2.6
SYCE3A1L190 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.17□□□□□ -2.6
SYCE3A1L190 MIR577-201ENST00000385196 96 ntBASIC-1.17□□□□□ -2.6
SYCE3A1L190 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.17□□□□□ -2.6
SYCE3A1L190 AC025521.1-201ENST00000621624 286 ntBASIC-1.17□□□□□ -2.6
SYCE3A1L190 RNU6-502P-201ENST00000362419 108 ntBASIC-1.18□□□□□ -2.6
SYCE3A1L190 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.18□□□□□ -2.6
SYCE3A1L190 SNORD42B-201ENST00000458893 67 ntBASIC-1.18□□□□□ -2.6
SYCE3A1L190 MIR4694-201ENST00000578534 80 ntBASIC-1.18□□□□□ -2.6
SYCE3A1L190 MIR3144-201ENST00000579460 79 ntBASIC-1.18□□□□□ -2.6
SYCE3A1L190 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.19□□□□□ -2.6
SYCE3A1L190 SNORD50.2-201ENST00000365465 70 ntBASIC-1.19□□□□□ -2.6
SYCE3A1L190 RNU6-804P-201ENST00000384286 107 ntBASIC-1.19□□□□□ -2.6
SYCE3A1L190 MT-TG-201ENST00000387429 68 ntBASIC-1.19□□□□□ -2.6
SYCE3A1L190 RNU6-388P-201ENST00000517012 105 ntBASIC-1.19□□□□□ -2.6
SYCE3A1L190 RNU6-389P-201ENST00000517048 105 ntBASIC-1.19□□□□□ -2.6
SYCE3A1L190 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.19□□□□□ -2.6
SYCE3A1L190 RNU6-86P-201ENST00000606534 107 ntBASIC-1.19□□□□□ -2.6
SYCE3A1L190 AC097510.1-201ENST00000510945 133 ntBASIC-1.2□□□□□ -2.6
SYCE3A1L190 RNU6-65P-201ENST00000516332 98 ntBASIC-1.2□□□□□ -2.6
SYCE3A1L190 MIR4536-1-201ENST00000583537 88 ntBASIC-1.2□□□□□ -2.6
SYCE3A1L190 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.21□□□□□ -2.6
SYCE3A1L190 RNU6-476P-201ENST00000384726 107 ntBASIC-1.21□□□□□ -2.6
SYCE3A1L190 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.22□□□□□ -2.6
SYCE3A1L190 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.22□□□□□ -2.6
SYCE3A1L190 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.23□□□□□ -2.61
SYCE3A1L190 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.23□□□□□ -2.61
SYCE3A1L190 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.23□□□□□ -2.61
SYCE3A1L190 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.23□□□□□ -2.61
SYCE3A1L190 RNU7-85P-201ENST00000458851 63 ntBASIC-1.23□□□□□ -2.61
SYCE3A1L190 MIR4679-2-201ENST00000578358 77 ntBASIC-1.23□□□□□ -2.61
SYCE3A1L190 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.23□□□□□ -2.61
SYCE3A1L190 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.24□□□□□ -2.61
SYCE3A1L190 RNU6-832P-201ENST00000363319 107 ntBASIC-1.24□□□□□ -2.61
SYCE3A1L190 MIR518B-201ENST00000385127 83 ntBASIC-1.25□□□□□ -2.61
SYCE3A1L190 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.25□□□□□ -2.61
SYCE3A1L190 RNU6-719P-201ENST00000516671 104 ntBASIC-1.25□□□□□ -2.61
SYCE3A1L190 AL513043.2-201ENST00000573941 143 ntBASIC-1.25□□□□□ -2.61
SYCE3A1L190 RNY3P2-201ENST00000362918 102 ntBASIC-1.26□□□□□ -2.61
SYCE3A1L190 FGF7P7-201ENST00000514120 227 ntBASIC-1.26□□□□□ -2.61
SYCE3A1L190 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.27□□□□□ -2.61
SYCE3A1L190 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.27□□□□□ -2.61
SYCE3A1L190 RNU6-881P-201ENST00000516813 102 ntBASIC-1.27□□□□□ -2.61
SYCE3A1L190 MIR4439-201ENST00000583746 80 ntBASIC-1.27□□□□□ -2.61
SYCE3A1L190 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.28□□□□□ -2.61
SYCE3A1L190 RNA5SP272-201ENST00000516095 111 ntBASIC-1.28□□□□□ -2.61
SYCE3A1L190 MIR5704-201ENST00000584029 77 ntBASIC-1.28□□□□□ -2.61
SYCE3A1L190 AL035470.1-201ENST00000622571 220 ntBASIC-1.28□□□□□ -2.61
SYCE3A1L190 RNU6-132P-201ENST00000383863 107 ntBASIC-1.29□□□□□ -2.62
SYCE3A1L190 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.29□□□□□ -2.62
SYCE3A1L190 RNY1P7-201ENST00000384743 110 ntBASIC-1.29□□□□□ -2.62
SYCE3A1L190 MIR3179-1-201ENST00000578940 84 ntBASIC-1.29□□□□□ -2.62
SYCE3A1L190 MIR3179-2-201ENST00000579107 84 ntBASIC-1.29□□□□□ -2.62
SYCE3A1L190 MIR3179-3-201ENST00000579566 84 ntBASIC-1.29□□□□□ -2.62
SYCE3A1L190 MIR6854-201ENST00000614935 69 ntBASIC-1.29□□□□□ -2.62
SYCE3A1L190 MIR3179-4-201ENST00000617599 84 ntBASIC-1.29□□□□□ -2.62
SYCE3A1L190 SNORA63.2-201ENST00000362603 126 ntBASIC-1.3□□□□□ -2.62
SYCE3A1L190 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.3□□□□□ -2.62
SYCE3A1L190 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.3□□□□□ -2.62
SYCE3A1L190 RNU6-721P-201ENST00000410155 105 ntBASIC-1.3□□□□□ -2.62
SYCE3A1L190 RNU6-426P-201ENST00000516464 97 ntBASIC-1.3□□□□□ -2.62
SYCE3A1L190 MIR3613-201ENST00000579844 87 ntBASIC-1.3□□□□□ -2.62
SYCE3A1L190 AL353621.2-201ENST00000605340 133 ntBASIC-1.3□□□□□ -2.62
SYCE3A1L190 RNU6-495P-201ENST00000362995 107 ntBASIC-1.31□□□□□ -2.62
SYCE3A1L190 MTND4LP9-201ENST00000427694 174 ntBASIC-1.31□□□□□ -2.62
SYCE3A1L190 SNORD57-201ENST00000448188 72 ntBASIC-1.31□□□□□ -2.62
SYCE3A1L190 RNU6-772P-201ENST00000516042 105 ntBASIC-1.31□□□□□ -2.62
SYCE3A1L190 MTND5P41-201ENST00000517498 206 ntBASIC-1.31□□□□□ -2.62
SYCE3A1L190 MIR6773-201ENST00000612812 74 ntBASIC-1.31□□□□□ -2.62
SYCE3A1L190 MIR409-201ENST00000362237 79 ntBASIC-1.32□□□□□ -2.62
SYCE3A1L190 SNORD74.6-201ENST00000364796 70 ntBASIC-1.32□□□□□ -2.62
SYCE3A1L190 SNORA63.6-201ENST00000364921 119 ntBASIC-1.32□□□□□ -2.62
SYCE3A1L190 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.32□□□□□ -2.62
SYCE3A1L190 SNORD22.1-201ENST00000516331 125 ntBASIC-1.32□□□□□ -2.62
SYCE3A1L190 RNU6-182P-201ENST00000516970 105 ntBASIC-1.32□□□□□ -2.62
SYCE3A1L190 AC068339.1-201ENST00000526965 141 ntBASIC-1.32□□□□□ -2.62
SYCE3A1L190 RNY1P9-201ENST00000532431 109 ntBASIC-1.32□□□□□ -2.62
SYCE3A1L190 RNU4-36P-201ENST00000364294 144 ntBASIC-1.33□□□□□ -2.62
SYCE3A1L190 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.33□□□□□ -2.62
SYCE3A1L190 MIR548U-201ENST00000390728 81 ntBASIC-1.33□□□□□ -2.62
SYCE3A1L190 RNU6-644P-201ENST00000391155 98 ntBASIC-1.33□□□□□ -2.62
SYCE3A1L190 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.33□□□□□ -2.62
SYCE3A1L190 AL157777.2-201ENST00000258070 137 ntBASIC-1.34□□□□□ -2.62
SYCE3A1L190 RNU6-592P-201ENST00000411333 103 ntBASIC-1.34□□□□□ -2.62
SYCE3A1L190 MIR3064-201ENST00000581130 66 ntBASIC-1.34□□□□□ -2.62
SYCE3A1L190 MIR4719-201ENST00000585233 84 ntBASIC-1.34□□□□□ -2.62
SYCE3A1L190 SNORD45B-201ENST00000364617 72 ntBASIC-1.35□□□□□ -2.63
SYCE3A1L190 SNORA24B-201ENST00000384176 131 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms