Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MIR519A1-201ENST00000385257 85 ntBASIC0.95□□□□□ -2.26
PCDHB1Q9Y5F3 SNORD90-201ENST00000391145 111 ntBASIC0.95□□□□□ -2.26
PCDHB1Q9Y5F3 RNU6-466P-201ENST00000391224 103 ntBASIC0.95□□□□□ -2.26
PCDHB1Q9Y5F3 AC097635.1-201ENST00000450678 155 ntBASIC0.95□□□□□ -2.26
PCDHB1Q9Y5F3 AC138907.6-201ENST00000568401 126 ntBASIC0.95□□□□□ -2.26
PCDHB1Q9Y5F3 AC138869.1-201ENST00000568623 124 ntBASIC0.95□□□□□ -2.26
PCDHB1Q9Y5F3 RNU4-45P-201ENST00000365469 141 ntBASIC0.94□□□□□ -2.26
PCDHB1Q9Y5F3 MIR519C-201ENST00000385053 87 ntBASIC0.94□□□□□ -2.26
PCDHB1Q9Y5F3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.94□□□□□ -2.26
PCDHB1Q9Y5F3 AC011195.1-201ENST00000578177 177 ntBASIC0.94□□□□□ -2.26
PCDHB1Q9Y5F3 MIR4536-1-201ENST00000583537 88 ntBASIC0.94□□□□□ -2.26
PCDHB1Q9Y5F3 RNU6-228P-201ENST00000362700 106 ntBASIC0.93□□□□□ -2.26
PCDHB1Q9Y5F3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
PCDHB1Q9Y5F3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.93□□□□□ -2.26
PCDHB1Q9Y5F3 RNU6-65P-201ENST00000516332 98 ntBASIC0.93□□□□□ -2.26
PCDHB1Q9Y5F3 MIR4698-201ENST00000577795 80 ntBASIC0.93□□□□□ -2.26
PCDHB1Q9Y5F3 MIR3064-201ENST00000581130 66 ntBASIC0.93□□□□□ -2.26
PCDHB1Q9Y5F3 RN7SL793P-201ENST00000583259 296 ntBASIC0.93□□□□□ -2.26
PCDHB1Q9Y5F3 Y_RNA.313-201ENST00000365095 103 ntBASIC0.92□□□□□ -2.26
PCDHB1Q9Y5F3 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
PCDHB1Q9Y5F3 RNA5SP225-201ENST00000410874 135 ntBASIC0.92□□□□□ -2.26
PCDHB1Q9Y5F3 AC244098.3-201ENST00000424803 96 ntBASIC0.92□□□□□ -2.26
PCDHB1Q9Y5F3 AC244505.6-201ENST00000452829 130 ntBASIC0.92□□□□□ -2.26
PCDHB1Q9Y5F3 MIR3612-201ENST00000579753 87 ntBASIC0.92□□□□□ -2.26
PCDHB1Q9Y5F3 RNU6-811P-201ENST00000384069 107 ntBASIC0.91□□□□□ -2.26
PCDHB1Q9Y5F3 RNU6-1124P-201ENST00000384169 107 ntBASIC0.91□□□□□ -2.26
PCDHB1Q9Y5F3 RNU6-242P-201ENST00000384359 107 ntBASIC0.91□□□□□ -2.26
PCDHB1Q9Y5F3 MIR216A-201ENST00000385063 110 ntBASIC0.91□□□□□ -2.26
PCDHB1Q9Y5F3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
PCDHB1Q9Y5F3 RNU7-171P-201ENST00000459581 62 ntBASIC0.91□□□□□ -2.26
PCDHB1Q9Y5F3 SNORA18.5-201ENST00000516616 101 ntBASIC0.91□□□□□ -2.26
PCDHB1Q9Y5F3 RNU6-135P-201ENST00000516769 101 ntBASIC0.91□□□□□ -2.26
PCDHB1Q9Y5F3 SNORD115-24-201ENST00000363528 82 ntBASIC0.9□□□□□ -2.27
PCDHB1Q9Y5F3 Y_RNA.437-201ENST00000384113 113 ntBASIC0.9□□□□□ -2.27
PCDHB1Q9Y5F3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
PCDHB1Q9Y5F3 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
PCDHB1Q9Y5F3 RNU6-1265P-201ENST00000516342 103 ntBASIC0.9□□□□□ -2.27
PCDHB1Q9Y5F3 RNU7-161P-201ENST00000517289 62 ntBASIC0.9□□□□□ -2.27
PCDHB1Q9Y5F3 AC104996.3-201ENST00000590718 94 ntBASIC0.9□□□□□ -2.27
PCDHB1Q9Y5F3 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
PCDHB1Q9Y5F3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
PCDHB1Q9Y5F3 SNORD78.1-201ENST00000390866 65 ntBASIC0.89□□□□□ -2.27
PCDHB1Q9Y5F3 MIR1255A-201ENST00000408338 113 ntBASIC0.89□□□□□ -2.27
PCDHB1Q9Y5F3 MIR1236-201ENST00000408340 102 ntBASIC0.89□□□□□ -2.27
PCDHB1Q9Y5F3 RNU6-469P-201ENST00000516253 101 ntBASIC0.89□□□□□ -2.27
PCDHB1Q9Y5F3 MIR4796-201ENST00000580742 81 ntBASIC0.89□□□□□ -2.27
PCDHB1Q9Y5F3 MIR4696-201ENST00000581431 70 ntBASIC0.89□□□□□ -2.27
PCDHB1Q9Y5F3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
PCDHB1Q9Y5F3 Y_RNA.219-201ENST00000364232 113 ntBASIC0.88□□□□□ -2.27
PCDHB1Q9Y5F3 RNU6-652P-201ENST00000365488 107 ntBASIC0.88□□□□□ -2.27
PCDHB1Q9Y5F3 Y_RNA.426-201ENST00000384068 113 ntBASIC0.88□□□□□ -2.27
PCDHB1Q9Y5F3 RNU6-110P-201ENST00000384508 104 ntBASIC0.88□□□□□ -2.27
PCDHB1Q9Y5F3 AC093729.1-201ENST00000513074 128 ntBASIC0.88□□□□□ -2.27
PCDHB1Q9Y5F3 SNORA25.13-201ENST00000516395 103 ntBASIC0.88□□□□□ -2.27
PCDHB1Q9Y5F3 AC140658.3-201ENST00000567603 271 ntBASIC0.88□□□□□ -2.27
PCDHB1Q9Y5F3 MIR4714-201ENST00000580728 77 ntBASIC0.88□□□□□ -2.27
PCDHB1Q9Y5F3 Y_RNA.316-201ENST00000365118 111 ntBASIC0.87□□□□□ -2.27
PCDHB1Q9Y5F3 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
PCDHB1Q9Y5F3 Y_RNA.491-201ENST00000384417 107 ntBASIC0.87□□□□□ -2.27
PCDHB1Q9Y5F3 RNU7-104P-201ENST00000459398 79 ntBASIC0.87□□□□□ -2.27
PCDHB1Q9Y5F3 MIR4666B-201ENST00000578142 81 ntBASIC0.87□□□□□ -2.27
PCDHB1Q9Y5F3 MIR18A-201ENST00000362310 71 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 RNU6-664P-201ENST00000362381 107 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 RNA5SP403-201ENST00000363598 108 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 SNORD101-201ENST00000384027 73 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 RNU6-1275P-201ENST00000391087 107 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 Y_RNA.607-201ENST00000410597 98 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 RNA5SP222-201ENST00000411039 105 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 AL450471.1-201ENST00000447509 127 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 MIR3678-201ENST00000578455 94 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 MIR548AG2-201ENST00000581228 64 ntBASIC0.86□□□□□ -2.27
PCDHB1Q9Y5F3 SNORD18A-201ENST00000363753 72 ntBASIC0.85□□□□□ -2.27
PCDHB1Q9Y5F3 MIR3140-201ENST00000583685 90 ntBASIC0.85□□□□□ -2.27
PCDHB1Q9Y5F3 MTRNR2L2-201ENST00000604882 87 ntBASIC0.85□□□□□ -2.27
PCDHB1Q9Y5F3 SNORD115-37-201ENST00000363768 82 ntBASIC0.84□□□□□ -2.27
PCDHB1Q9Y5F3 RNU6-478P-201ENST00000363904 110 ntBASIC0.84□□□□□ -2.27
PCDHB1Q9Y5F3 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
PCDHB1Q9Y5F3 Y_RNA.207-201ENST00000364142 106 ntBASIC0.84□□□□□ -2.27
PCDHB1Q9Y5F3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.84□□□□□ -2.27
PCDHB1Q9Y5F3 Y_RNA.596-201ENST00000410462 109 ntBASIC0.84□□□□□ -2.27
PCDHB1Q9Y5F3 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
PCDHB1Q9Y5F3 RNU6-287P-201ENST00000516230 98 ntBASIC0.84□□□□□ -2.27
PCDHB1Q9Y5F3 AC244669.1-204ENST00000621564 178 ntBASIC0.84□□□□□ -2.27
PCDHB1Q9Y5F3 SNORD28-201ENST00000384706 75 ntBASIC0.83□□□□□ -2.28
PCDHB1Q9Y5F3 MIR548U-201ENST00000390728 81 ntBASIC0.83□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-1052P-201ENST00000411398 104 ntBASIC0.83□□□□□ -2.28
PCDHB1Q9Y5F3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.83□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-719P-201ENST00000516671 104 ntBASIC0.83□□□□□ -2.28
PCDHB1Q9Y5F3 MIR3920-201ENST00000581751 86 ntBASIC0.83□□□□□ -2.28
PCDHB1Q9Y5F3 MIR3202-2-201ENST00000635980 79 ntBASIC0.83□□□□□ -2.28
PCDHB1Q9Y5F3 Y_RNA.239-201ENST00000364444 113 ntBASIC0.82□□□□□ -2.28
PCDHB1Q9Y5F3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.82□□□□□ -2.28
PCDHB1Q9Y5F3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.82□□□□□ -2.28
PCDHB1Q9Y5F3 snoU13.17-201ENST00000458802 104 ntBASIC0.82□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-1108P-201ENST00000516308 104 ntBASIC0.82□□□□□ -2.28
PCDHB1Q9Y5F3 RNU7-13P-201ENST00000516413 62 ntBASIC0.82□□□□□ -2.28
PCDHB1Q9Y5F3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.82□□□□□ -2.28
PCDHB1Q9Y5F3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 240.7 ms