Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 MIR4773-1-201ENST00000637203 78 ntBASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LMCD1Q9NZU5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LMCD1Q9NZU5 Y_RNA.13-201ENST00000362403 112 ntBASIC1.75□□□□□ -2.13
LMCD1Q9NZU5 SNORA25.5-201ENST00000363782 126 ntBASIC1.75□□□□□ -2.13
LMCD1Q9NZU5 RNU1-42P-201ENST00000364033 160 ntBASIC1.75□□□□□ -2.13
LMCD1Q9NZU5 AC244098.3-201ENST00000424803 96 ntBASIC1.75□□□□□ -2.13
LMCD1Q9NZU5 AC079140.2-201ENST00000506193 142 ntBASIC1.75□□□□□ -2.13
LMCD1Q9NZU5 RNU6-542P-201ENST00000516405 103 ntBASIC1.75□□□□□ -2.13
LMCD1Q9NZU5 MIR3937-201ENST00000580135 106 ntBASIC1.75□□□□□ -2.13
LMCD1Q9NZU5 AL645939.4-201ENST00000604495 135 ntBASIC1.75□□□□□ -2.13
LMCD1Q9NZU5 RNU7-10P-201ENST00000607194 63 ntBASIC1.75□□□□□ -2.13
LMCD1Q9NZU5 SNORD33-201ENST00000362761 85 ntBASIC1.74□□□□□ -2.13
LMCD1Q9NZU5 Y_RNA.56-201ENST00000362798 112 ntBASIC1.74□□□□□ -2.13
LMCD1Q9NZU5 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
LMCD1Q9NZU5 MIR517C-201ENST00000385103 95 ntBASIC1.74□□□□□ -2.13
LMCD1Q9NZU5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.74□□□□□ -2.13
LMCD1Q9NZU5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.74□□□□□ -2.13
LMCD1Q9NZU5 Y_RNA.697-201ENST00000516776 113 ntBASIC1.74□□□□□ -2.13
LMCD1Q9NZU5 RNA5SP102-201ENST00000516865 106 ntBASIC1.74□□□□□ -2.13
LMCD1Q9NZU5 MIR4419B-201ENST00000577260 68 ntBASIC1.74□□□□□ -2.13
LMCD1Q9NZU5 MIR3198-2-201ENST00000577868 80 ntBASIC1.74□□□□□ -2.13
LMCD1Q9NZU5 RNU6-936P-201ENST00000384005 107 ntBASIC1.73□□□□□ -2.13
LMCD1Q9NZU5 RNU6-1184P-201ENST00000384588 108 ntBASIC1.73□□□□□ -2.13
LMCD1Q9NZU5 SNORA67.6-201ENST00000391093 99 ntBASIC1.73□□□□□ -2.13
LMCD1Q9NZU5 MIR1257-201ENST00000408490 117 ntBASIC1.73□□□□□ -2.13
LMCD1Q9NZU5 MIR4421-201ENST00000578133 69 ntBASIC1.73□□□□□ -2.13
LMCD1Q9NZU5 MIR3664-201ENST00000579074 99 ntBASIC1.73□□□□□ -2.13
LMCD1Q9NZU5 RMST_2.1-201ENST00000617263 136 ntBASIC1.73□□□□□ -2.13
LMCD1Q9NZU5 MIR302D-201ENST00000362275 68 ntBASIC1.72□□□□□ -2.13
LMCD1Q9NZU5 RNU6-934P-201ENST00000365154 107 ntBASIC1.72□□□□□ -2.13
LMCD1Q9NZU5 RNU6-808P-201ENST00000391233 108 ntBASIC1.72□□□□□ -2.13
LMCD1Q9NZU5 SCARNA21.1-201ENST00000515996 128 ntBASIC1.72□□□□□ -2.13
LMCD1Q9NZU5 RNU6-165P-201ENST00000517170 99 ntBASIC1.72□□□□□ -2.13
LMCD1Q9NZU5 AL078603.1-201ENST00000603824 313 ntBASIC1.72□□□□□ -2.13
LMCD1Q9NZU5 MIR6082-201ENST00000613604 109 ntBASIC1.72□□□□□ -2.13
LMCD1Q9NZU5 RNU6-940P-201ENST00000363433 104 ntBASIC1.71□□□□□ -2.14
LMCD1Q9NZU5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.71□□□□□ -2.14
LMCD1Q9NZU5 MIR599-201ENST00000385069 95 ntBASIC1.71□□□□□ -2.14
LMCD1Q9NZU5 AC048334.1-201ENST00000477975 159 ntBASIC1.71□□□□□ -2.14
LMCD1Q9NZU5 RNA5SP480-201ENST00000516840 109 ntBASIC1.71□□□□□ -2.14
LMCD1Q9NZU5 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
LMCD1Q9NZU5 RNU6-668P-201ENST00000364180 107 ntBASIC1.7□□□□□ -2.14
LMCD1Q9NZU5 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LMCD1Q9NZU5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.7□□□□□ -2.14
LMCD1Q9NZU5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.7□□□□□ -2.14
LMCD1Q9NZU5 MIR4771-2-201ENST00000577758 74 ntBASIC1.7□□□□□ -2.14
LMCD1Q9NZU5 MIR4771-1-201ENST00000582617 74 ntBASIC1.7□□□□□ -2.14
LMCD1Q9NZU5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LMCD1Q9NZU5 U3.27-201ENST00000391237 200 ntBASIC1.69□□□□□ -2.14
LMCD1Q9NZU5 SNORD75.2-201ENST00000408784 58 ntBASIC1.69□□□□□ -2.14
LMCD1Q9NZU5 MTND4LP1-201ENST00000446263 157 ntBASIC1.69□□□□□ -2.14
LMCD1Q9NZU5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.69□□□□□ -2.14
LMCD1Q9NZU5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.69□□□□□ -2.14
LMCD1Q9NZU5 AC073869.9-201ENST00000641610 120 ntBASIC1.69□□□□□ -2.14
LMCD1Q9NZU5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LMCD1Q9NZU5 SNORD113.3-201ENST00000364630 78 ntBASIC1.68□□□□□ -2.14
LMCD1Q9NZU5 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
LMCD1Q9NZU5 RNU6-765P-201ENST00000516916 99 ntBASIC1.68□□□□□ -2.14
LMCD1Q9NZU5 SNORA31.24-201ENST00000517232 57 ntBASIC1.68□□□□□ -2.14
LMCD1Q9NZU5 AC036111.3-201ENST00000526389 112 ntBASIC1.68□□□□□ -2.14
LMCD1Q9NZU5 AL157834.3-201ENST00000615543 103 ntBASIC1.68□□□□□ -2.14
LMCD1Q9NZU5 MIR6734-201ENST00000621166 68 ntBASIC1.68□□□□□ -2.14
LMCD1Q9NZU5 RNA5SP117-201ENST00000365294 118 ntBASIC1.67□□□□□ -2.14
LMCD1Q9NZU5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
LMCD1Q9NZU5 RNU7-24P-201ENST00000458867 62 ntBASIC1.67□□□□□ -2.14
LMCD1Q9NZU5 RNU6-287P-201ENST00000516230 98 ntBASIC1.67□□□□□ -2.14
LMCD1Q9NZU5 RNU1-92P-201ENST00000517017 135 ntBASIC1.67□□□□□ -2.14
LMCD1Q9NZU5 RNU6-1057P-201ENST00000517162 102 ntBASIC1.67□□□□□ -2.14
LMCD1Q9NZU5 AL512310.8-201ENST00000550183 120 ntBASIC1.67□□□□□ -2.14
LMCD1Q9NZU5 AC023827.1-201ENST00000569247 97 ntBASIC1.67□□□□□ -2.14
LMCD1Q9NZU5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.67□□□□□ -2.14
LMCD1Q9NZU5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
LMCD1Q9NZU5 RNU6-495P-201ENST00000362995 107 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 SNORD114-26-201ENST00000363543 72 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 RNA5SP245-201ENST00000364239 121 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 SNORD114-22-201ENST00000365423 72 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 RNU6-1039P-201ENST00000383931 107 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 MIR125B2-201ENST00000385128 89 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 SNORA75.2-201ENST00000391138 150 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 SNORA75.3-201ENST00000391231 150 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 RNU6-122P-201ENST00000516818 107 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 AC138907.6-201ENST00000568401 126 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 AC138869.1-201ENST00000568623 124 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 AL353770.2-201ENST00000620024 78 ntBASIC1.66□□□□□ -2.14
LMCD1Q9NZU5 RNA5SP299-201ENST00000391203 116 ntBASIC1.65□□□□□ -2.15
LMCD1Q9NZU5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.65□□□□□ -2.15
LMCD1Q9NZU5 RNU6-645P-201ENST00000364649 106 ntBASIC1.64□□□□□ -2.15
LMCD1Q9NZU5 RNU1-78P-201ENST00000391248 165 ntBASIC1.64□□□□□ -2.15
LMCD1Q9NZU5 RNU4-88P-201ENST00000411220 86 ntBASIC1.64□□□□□ -2.15
LMCD1Q9NZU5 SNORA31.2-201ENST00000516019 134 ntBASIC1.64□□□□□ -2.15
LMCD1Q9NZU5 RN7SKP88-201ENST00000516847 250 ntBASIC1.64□□□□□ -2.15
LMCD1Q9NZU5 NAMPTP3-201ENST00000569273 224 ntBASIC1.64□□□□□ -2.15
LMCD1Q9NZU5 MIR4422-201ENST00000581938 83 ntBASIC1.64□□□□□ -2.15
LMCD1Q9NZU5 MIR3938-201ENST00000582157 103 ntBASIC1.64□□□□□ -2.15
LMCD1Q9NZU5 7SK.8-201ENST00000612110 250 ntBASIC1.64□□□□□ -2.15
LMCD1Q9NZU5 7SK.11-201ENST00000615477 250 ntBASIC1.64□□□□□ -2.15
LMCD1Q9NZU5 7SK.13-201ENST00000622040 250 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 204.3 ms