Protein–RNA interactions for Protein: Q9NYG2

ZDHHC3, Palmitoyltransferase ZDHHC3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3Q9NYG2 MIR502-201ENST00000606349 86 ntBASIC1.66□□□□□ -2.14
ZDHHC3Q9NYG2 SNORD115-22-201ENST00000364456 82 ntBASIC1.65□□□□□ -2.15
ZDHHC3Q9NYG2 MIR644A-201ENST00000385262 94 ntBASIC1.65□□□□□ -2.15
ZDHHC3Q9NYG2 SNORD89-201ENST00000390981 114 ntBASIC1.65□□□□□ -2.15
ZDHHC3Q9NYG2 RNU6-752P-201ENST00000516376 102 ntBASIC1.65□□□□□ -2.15
ZDHHC3Q9NYG2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.65□□□□□ -2.15
ZDHHC3Q9NYG2 AC067863.3-201ENST00000624172 122 ntBASIC1.65□□□□□ -2.15
ZDHHC3Q9NYG2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ZDHHC3Q9NYG2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.64□□□□□ -2.15
ZDHHC3Q9NYG2 RNU6-630P-201ENST00000391258 106 ntBASIC1.64□□□□□ -2.15
ZDHHC3Q9NYG2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.64□□□□□ -2.15
ZDHHC3Q9NYG2 RNU1-123P-201ENST00000458950 160 ntBASIC1.64□□□□□ -2.15
ZDHHC3Q9NYG2 RNU6-469P-201ENST00000516253 101 ntBASIC1.64□□□□□ -2.15
ZDHHC3Q9NYG2 MIR617-201ENST00000385030 97 ntBASIC1.63□□□□□ -2.15
ZDHHC3Q9NYG2 MIR216B-201ENST00000390186 82 ntBASIC1.63□□□□□ -2.15
ZDHHC3Q9NYG2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
ZDHHC3Q9NYG2 SNORA25-201ENST00000384384 134 ntBASIC1.62□□□□□ -2.15
ZDHHC3Q9NYG2 SNORD75.2-201ENST00000408784 58 ntBASIC1.62□□□□□ -2.15
ZDHHC3Q9NYG2 AC002350.1-201ENST00000490759 375 ntBASIC1.62□□□□□ -2.15
ZDHHC3Q9NYG2 MIR3122-201ENST00000577243 73 ntBASIC1.62□□□□□ -2.15
ZDHHC3Q9NYG2 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
ZDHHC3Q9NYG2 AC005520.4-201ENST00000604337 90 ntBASIC1.62□□□□□ -2.15
ZDHHC3Q9NYG2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ZDHHC3Q9NYG2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ZDHHC3Q9NYG2 RNA5SP327-201ENST00000362494 101 ntBASIC1.61□□□□□ -2.15
ZDHHC3Q9NYG2 MIR548L-201ENST00000408303 86 ntBASIC1.61□□□□□ -2.15
ZDHHC3Q9NYG2 RNU6-548P-201ENST00000517083 115 ntBASIC1.61□□□□□ -2.15
ZDHHC3Q9NYG2 MIR3124-201ENST00000582636 67 ntBASIC1.61□□□□□ -2.15
ZDHHC3Q9NYG2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
ZDHHC3Q9NYG2 SNORD113.1-201ENST00000363280 73 ntBASIC1.6□□□□□ -2.15
ZDHHC3Q9NYG2 MIR519E-201ENST00000385075 84 ntBASIC1.6□□□□□ -2.15
ZDHHC3Q9NYG2 AL591806.2-201ENST00000433122 173 ntBASIC1.6□□□□□ -2.15
ZDHHC3Q9NYG2 AC093423.1-201ENST00000440817 142 ntBASIC1.6□□□□□ -2.15
ZDHHC3Q9NYG2 NAMPTP3-201ENST00000569273 224 ntBASIC1.6□□□□□ -2.15
ZDHHC3Q9NYG2 RNU6-1216P-201ENST00000362590 107 ntBASIC1.59□□□□□ -2.15
ZDHHC3Q9NYG2 RNA5SP190-201ENST00000365222 118 ntBASIC1.59□□□□□ -2.15
ZDHHC3Q9NYG2 Y_RNA.443-201ENST00000384135 111 ntBASIC1.59□□□□□ -2.15
ZDHHC3Q9NYG2 SNORD105-201ENST00000386910 85 ntBASIC1.59□□□□□ -2.15
ZDHHC3Q9NYG2 AC108210.2-201ENST00000503681 201 ntBASIC1.59□□□□□ -2.15
ZDHHC3Q9NYG2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.59□□□□□ -2.15
ZDHHC3Q9NYG2 SNORA7.1-201ENST00000363750 139 ntBASIC1.58□□□□□ -2.16
ZDHHC3Q9NYG2 RNU6-471P-201ENST00000383944 106 ntBASIC1.58□□□□□ -2.16
ZDHHC3Q9NYG2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
ZDHHC3Q9NYG2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.58□□□□□ -2.16
ZDHHC3Q9NYG2 RNU6-135P-201ENST00000516769 101 ntBASIC1.58□□□□□ -2.16
ZDHHC3Q9NYG2 MIR4524B-201ENST00000581569 115 ntBASIC1.58□□□□□ -2.16
ZDHHC3Q9NYG2 MIR6509-201ENST00000614603 85 ntBASIC1.58□□□□□ -2.16
ZDHHC3Q9NYG2 AC244669.1-204ENST00000621564 178 ntBASIC1.58□□□□□ -2.16
ZDHHC3Q9NYG2 RNU6-495P-201ENST00000362995 107 ntBASIC1.57□□□□□ -2.16
ZDHHC3Q9NYG2 SNORA25.4-201ENST00000363666 124 ntBASIC1.57□□□□□ -2.16
ZDHHC3Q9NYG2 RNU6-54P-201ENST00000365563 107 ntBASIC1.57□□□□□ -2.16
ZDHHC3Q9NYG2 MIR203A-201ENST00000384836 110 ntBASIC1.57□□□□□ -2.16
ZDHHC3Q9NYG2 FABP5P4-201ENST00000437203 171 ntBASIC1.57□□□□□ -2.16
ZDHHC3Q9NYG2 MIR4639-201ENST00000584938 69 ntBASIC1.57□□□□□ -2.16
ZDHHC3Q9NYG2 MIR548O2-201ENST00000616090 70 ntBASIC1.57□□□□□ -2.16
ZDHHC3Q9NYG2 MIR764-201ENST00000390811 85 ntBASIC1.56□□□□□ -2.16
ZDHHC3Q9NYG2 RNU7-24P-201ENST00000458867 62 ntBASIC1.56□□□□□ -2.16
ZDHHC3Q9NYG2 RNU7-74P-201ENST00000459104 62 ntBASIC1.56□□□□□ -2.16
ZDHHC3Q9NYG2 SNORD13-201ENST00000459299 104 ntBASIC1.56□□□□□ -2.16
ZDHHC3Q9NYG2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.56□□□□□ -2.16
ZDHHC3Q9NYG2 RNU6-1039P-201ENST00000383931 107 ntBASIC1.55□□□□□ -2.16
ZDHHC3Q9NYG2 snoU13.23-201ENST00000458863 104 ntBASIC1.55□□□□□ -2.16
ZDHHC3Q9NYG2 BX248123.2-201ENST00000606318 124 ntBASIC1.55□□□□□ -2.16
ZDHHC3Q9NYG2 RNU6V-201ENST00000384105 107 ntBASIC1.54□□□□□ -2.16
ZDHHC3Q9NYG2 SNORD28-201ENST00000384706 75 ntBASIC1.54□□□□□ -2.16
ZDHHC3Q9NYG2 AC015712.3-201ENST00000559380 164 ntBASIC1.54□□□□□ -2.16
ZDHHC3Q9NYG2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
ZDHHC3Q9NYG2 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
ZDHHC3Q9NYG2 SNORD116-24-201ENST00000384549 92 ntBASIC1.53□□□□□ -2.16
ZDHHC3Q9NYG2 U7.7-201ENST00000459276 60 ntBASIC1.53□□□□□ -2.16
ZDHHC3Q9NYG2 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
ZDHHC3Q9NYG2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
ZDHHC3Q9NYG2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ZDHHC3Q9NYG2 RNU1-17P-201ENST00000363022 152 ntBASIC1.52□□□□□ -2.17
ZDHHC3Q9NYG2 RNU6-716P-201ENST00000365621 103 ntBASIC1.52□□□□□ -2.17
ZDHHC3Q9NYG2 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
ZDHHC3Q9NYG2 RNU6-982P-201ENST00000516216 102 ntBASIC1.52□□□□□ -2.17
ZDHHC3Q9NYG2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
ZDHHC3Q9NYG2 SNORD18A-201ENST00000363753 72 ntBASIC1.51□□□□□ -2.17
ZDHHC3Q9NYG2 SNORA67.5-201ENST00000391036 107 ntBASIC1.51□□□□□ -2.17
ZDHHC3Q9NYG2 AL353997.5-201ENST00000618886 171 ntBASIC1.51□□□□□ -2.17
ZDHHC3Q9NYG2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ZDHHC3Q9NYG2 RNA5SP99-201ENST00000364020 114 ntBASIC1.5□□□□□ -2.17
ZDHHC3Q9NYG2 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
ZDHHC3Q9NYG2 MIR9-2-201ENST00000384838 87 ntBASIC1.5□□□□□ -2.17
ZDHHC3Q9NYG2 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
ZDHHC3Q9NYG2 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
ZDHHC3Q9NYG2 SNORD124-201ENST00000459577 104 ntBASIC1.5□□□□□ -2.17
ZDHHC3Q9NYG2 MIR4460-201ENST00000577862 86 ntBASIC1.5□□□□□ -2.17
ZDHHC3Q9NYG2 SNORD41.1-201ENST00000391000 69 ntBASIC1.49□□□□□ -2.17
ZDHHC3Q9NYG2 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
ZDHHC3Q9NYG2 MIR3678-201ENST00000578455 94 ntBASIC1.49□□□□□ -2.17
ZDHHC3Q9NYG2 MIR3612-201ENST00000579753 87 ntBASIC1.49□□□□□ -2.17
ZDHHC3Q9NYG2 MIR573-201ENST00000384964 99 ntBASIC1.48□□□□□ -2.17
ZDHHC3Q9NYG2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.48□□□□□ -2.17
ZDHHC3Q9NYG2 MTND4LP1-201ENST00000446263 157 ntBASIC1.48□□□□□ -2.17
ZDHHC3Q9NYG2 SNORD42B-201ENST00000458893 67 ntBASIC1.48□□□□□ -2.17
ZDHHC3Q9NYG2 RNU1-92P-201ENST00000517017 135 ntBASIC1.48□□□□□ -2.17
ZDHHC3Q9NYG2 RNA5SP47-201ENST00000517230 109 ntBASIC1.48□□□□□ -2.17
ZDHHC3Q9NYG2 MIR4769-201ENST00000584126 77 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms