Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.94□□□□□ -2.56
TREX1Q9NSU2 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.94□□□□□ -2.56
TREX1Q9NSU2 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.94□□□□□ -2.56
TREX1Q9NSU2 MIRLET7B-201ENST00000385140 83 ntBASIC-0.94□□□□□ -2.56
TREX1Q9NSU2 MIR216B-201ENST00000390186 82 ntBASIC-0.94□□□□□ -2.56
TREX1Q9NSU2 MIR1468-201ENST00000410600 86 ntBASIC-0.94□□□□□ -2.56
TREX1Q9NSU2 RNU6-479P-201ENST00000516348 105 ntBASIC-0.94□□□□□ -2.56
TREX1Q9NSU2 MIR3149-201ENST00000584629 83 ntBASIC-0.94□□□□□ -2.56
TREX1Q9NSU2 RNU6-337P-201ENST00000391243 106 ntBASIC-0.95□□□□□ -2.56
TREX1Q9NSU2 AC138207.3-201ENST00000585289 166 ntBASIC-0.95□□□□□ -2.56
TREX1Q9NSU2 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.95□□□□□ -2.56
TREX1Q9NSU2 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.96□□□□□ -2.56
TREX1Q9NSU2 SNORD36A-201ENST00000362874 73 ntBASIC-0.96□□□□□ -2.56
TREX1Q9NSU2 RNA5SP192-201ENST00000364404 120 ntBASIC-0.96□□□□□ -2.56
TREX1Q9NSU2 MIR124-2-201ENST00000385081 109 ntBASIC-0.96□□□□□ -2.56
TREX1Q9NSU2 SNORD37.2-201ENST00000391075 66 ntBASIC-0.96□□□□□ -2.56
TREX1Q9NSU2 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.96□□□□□ -2.56
TREX1Q9NSU2 SNORD127-201ENST00000458892 86 ntBASIC-0.96□□□□□ -2.56
TREX1Q9NSU2 MIR3115-201ENST00000577915 68 ntBASIC-0.96□□□□□ -2.56
TREX1Q9NSU2 MIR3165-201ENST00000579874 75 ntBASIC-0.96□□□□□ -2.56
TREX1Q9NSU2 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.97□□□□□ -2.56
TREX1Q9NSU2 SNORD114-4-201ENST00000363962 75 ntBASIC-0.97□□□□□ -2.56
TREX1Q9NSU2 SNORA62.4-201ENST00000365504 151 ntBASIC-0.97□□□□□ -2.56
TREX1Q9NSU2 RNU6-54P-201ENST00000365563 107 ntBASIC-0.97□□□□□ -2.56
TREX1Q9NSU2 MIR29B1-201ENST00000385015 81 ntBASIC-0.97□□□□□ -2.56
TREX1Q9NSU2 RNU6-762P-201ENST00000517107 102 ntBASIC-0.97□□□□□ -2.56
TREX1Q9NSU2 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.97□□□□□ -2.56
TREX1Q9NSU2 AC026421.1-201ENST00000519101 163 ntBASIC-0.97□□□□□ -2.56
TREX1Q9NSU2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.97□□□□□ -2.56
TREX1Q9NSU2 MIR4723-201ENST00000585070 81 ntBASIC-0.97□□□□□ -2.56
TREX1Q9NSU2 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.98□□□□□ -2.57
TREX1Q9NSU2 RNU7-134P-201ENST00000458997 64 ntBASIC-0.98□□□□□ -2.57
TREX1Q9NSU2 MIR3646-201ENST00000578301 84 ntBASIC-0.98□□□□□ -2.57
TREX1Q9NSU2 AC108081.1-201ENST00000604358 221 ntBASIC-0.98□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.98□□□□□ -2.57
TREX1Q9NSU2 AC021753.1-201ENST00000635724 168 ntBASIC-0.98□□□□□ -2.57
TREX1Q9NSU2 RNU6-235P-201ENST00000362644 107 ntBASIC-0.99□□□□□ -2.57
TREX1Q9NSU2 RNU6-957P-201ENST00000363652 99 ntBASIC-0.99□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.99□□□□□ -2.57
TREX1Q9NSU2 SNORD42B-201ENST00000458893 67 ntBASIC-0.99□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.99□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.99□□□□□ -2.57
TREX1Q9NSU2 MIR4464-201ENST00000580818 92 ntBASIC-0.99□□□□□ -2.57
TREX1Q9NSU2 MIR4696-201ENST00000581431 70 ntBASIC-0.99□□□□□ -2.57
TREX1Q9NSU2 YWHAEP3-201ENST00000582767 121 ntBASIC-0.99□□□□□ -2.57
TREX1Q9NSU2 AC044792.1-201ENST00000593294 196 ntBASIC-0.99□□□□□ -2.57
TREX1Q9NSU2 RNU6-664P-201ENST00000362381 107 ntBASIC-1□□□□□ -2.57
TREX1Q9NSU2 RNU6-1125P-201ENST00000363601 107 ntBASIC-1□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.173-201ENST00000363776 113 ntBASIC-1□□□□□ -2.57
TREX1Q9NSU2 SNORD101-201ENST00000384027 73 ntBASIC-1□□□□□ -2.57
TREX1Q9NSU2 MIR601-201ENST00000385256 79 ntBASIC-1□□□□□ -2.57
TREX1Q9NSU2 MIR6818-201ENST00000621576 65 ntBASIC-1□□□□□ -2.57
TREX1Q9NSU2 AL512310.12-203ENST00000640543 90 ntBASIC-1□□□□□ -2.57
TREX1Q9NSU2 RNU6-312P-201ENST00000364629 107 ntBASIC-1.01□□□□□ -2.57
TREX1Q9NSU2 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.01□□□□□ -2.57
TREX1Q9NSU2 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.01□□□□□ -2.57
TREX1Q9NSU2 RNU6-918P-201ENST00000391219 106 ntBASIC-1.01□□□□□ -2.57
TREX1Q9NSU2 SNORA7.5-201ENST00000410672 110 ntBASIC-1.01□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.01□□□□□ -2.57
TREX1Q9NSU2 AC068339.1-201ENST00000526965 141 ntBASIC-1.01□□□□□ -2.57
TREX1Q9NSU2 MIR3163-201ENST00000581592 73 ntBASIC-1.01□□□□□ -2.57
TREX1Q9NSU2 RNU6-208P-201ENST00000362431 107 ntBASIC-1.02□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.02□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.02□□□□□ -2.57
TREX1Q9NSU2 RNY1P11-201ENST00000363759 113 ntBASIC-1.02□□□□□ -2.57
TREX1Q9NSU2 SNORA63.6-201ENST00000364921 119 ntBASIC-1.02□□□□□ -2.57
TREX1Q9NSU2 MIR527-201ENST00000385244 85 ntBASIC-1.02□□□□□ -2.57
TREX1Q9NSU2 RNU6-935P-201ENST00000410371 100 ntBASIC-1.02□□□□□ -2.57
TREX1Q9NSU2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.02□□□□□ -2.57
TREX1Q9NSU2 RNU6-90P-201ENST00000606352 106 ntBASIC-1.02□□□□□ -2.57
TREX1Q9NSU2 MIR4320-201ENST00000636981 65 ntBASIC-1.02□□□□□ -2.57
TREX1Q9NSU2 SNORD115-19-201ENST00000363098 82 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 SNORD115-18-201ENST00000363293 82 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 SNORD115-17-201ENST00000364612 82 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 MIR759-201ENST00000390224 91 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 RNU6-576P-201ENST00000390854 102 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 MIR8485-201ENST00000401372 91 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 HLA-S-202ENST00000425174 53 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 MTCYBP6-201ENST00000441810 138 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 AL445584.3-201ENST00000617173 78 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 MIR6888-201ENST00000621977 67 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 MIR1255B1-201ENST00000636325 63 ntBASIC-1.03□□□□□ -2.57
TREX1Q9NSU2 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.04□□□□□ -2.58
TREX1Q9NSU2 RNU6-647P-201ENST00000364243 107 ntBASIC-1.04□□□□□ -2.58
TREX1Q9NSU2 RNU6-746P-201ENST00000384112 109 ntBASIC-1.04□□□□□ -2.58
TREX1Q9NSU2 MT-TI-201ENST00000387365 69 ntBASIC-1.04□□□□□ -2.58
TREX1Q9NSU2 U3.27-201ENST00000391237 200 ntBASIC-1.04□□□□□ -2.58
TREX1Q9NSU2 AP002392.1-201ENST00000537692 208 ntBASIC-1.04□□□□□ -2.58
TREX1Q9NSU2 MIR5591-201ENST00000578248 65 ntBASIC-1.04□□□□□ -2.58
TREX1Q9NSU2 MIR3658-201ENST00000636291 56 ntBASIC-1.04□□□□□ -2.58
TREX1Q9NSU2 MIR451A-201ENST00000385059 72 ntBASIC-1.05□□□□□ -2.58
TREX1Q9NSU2 RNU6-466P-201ENST00000391224 103 ntBASIC-1.05□□□□□ -2.58
TREX1Q9NSU2 MIR548G-201ENST00000408442 89 ntBASIC-1.05□□□□□ -2.58
TREX1Q9NSU2 SNORD63.1-201ENST00000516178 80 ntBASIC-1.05□□□□□ -2.58
TREX1Q9NSU2 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.05□□□□□ -2.58
TREX1Q9NSU2 MIR4770-201ENST00000579149 58 ntBASIC-1.05□□□□□ -2.58
TREX1Q9NSU2 AL353803.5-201ENST00000599815 141 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms