Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 MIR125B2-201ENST00000385128 89 ntBASIC1.39□□□□□ -2.19
SEMA4AQ9H3S1 AC114801.3-201ENST00000510231 177 ntBASIC1.39□□□□□ -2.19
SEMA4AQ9H3S1 MIR548H5-201ENST00000580314 60 ntBASIC1.39□□□□□ -2.19
SEMA4AQ9H3S1 AC008608.1-201ENST00000603910 127 ntBASIC1.39□□□□□ -2.19
SEMA4AQ9H3S1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.39□□□□□ -2.19
SEMA4AQ9H3S1 Y_RNA.42-201ENST00000362660 108 ntBASIC1.38□□□□□ -2.19
SEMA4AQ9H3S1 Y_RNA.56-201ENST00000362798 112 ntBASIC1.38□□□□□ -2.19
SEMA4AQ9H3S1 SNORA25.8-201ENST00000364831 128 ntBASIC1.38□□□□□ -2.19
SEMA4AQ9H3S1 MIR599-201ENST00000385069 95 ntBASIC1.38□□□□□ -2.19
SEMA4AQ9H3S1 MIR4676-201ENST00000583078 72 ntBASIC1.38□□□□□ -2.19
SEMA4AQ9H3S1 RN7SL793P-201ENST00000583259 296 ntBASIC1.38□□□□□ -2.19
SEMA4AQ9H3S1 RNU6-664P-201ENST00000362381 107 ntBASIC1.37□□□□□ -2.19
SEMA4AQ9H3S1 Y_RNA.178-201ENST00000363832 102 ntBASIC1.37□□□□□ -2.19
SEMA4AQ9H3S1 Y_RNA.239-201ENST00000364444 113 ntBASIC1.37□□□□□ -2.19
SEMA4AQ9H3S1 SNORD101-201ENST00000384027 73 ntBASIC1.37□□□□□ -2.19
SEMA4AQ9H3S1 RNU6-291P-201ENST00000384720 107 ntBASIC1.37□□□□□ -2.19
SEMA4AQ9H3S1 RNU6-535P-201ENST00000384722 107 ntBASIC1.37□□□□□ -2.19
SEMA4AQ9H3S1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.37□□□□□ -2.19
SEMA4AQ9H3S1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
SEMA4AQ9H3S1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 RNA5SP327-201ENST00000362494 101 ntBASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 RNU6-364P-201ENST00000384387 107 ntBASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 RNU6-411P-201ENST00000384451 107 ntBASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 RNU6-380P-201ENST00000410207 107 ntBASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 RPS26P5-201ENST00000418544 335 ntBASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 RNU7-102P-201ENST00000458948 62 ntBASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 AC027335.2-201ENST00000624030 375 ntBASIC1.36□□□□□ -2.19
SEMA4AQ9H3S1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.35□□□□□ -2.19
SEMA4AQ9H3S1 RNU6-369P-201ENST00000362515 102 ntBASIC1.35□□□□□ -2.19
SEMA4AQ9H3S1 RNU6-1260P-201ENST00000362944 107 ntBASIC1.35□□□□□ -2.19
SEMA4AQ9H3S1 AC002429.1-201ENST00000437672 148 ntBASIC1.35□□□□□ -2.19
SEMA4AQ9H3S1 MIR2113-201ENST00000459007 91 ntBASIC1.35□□□□□ -2.19
SEMA4AQ9H3S1 RNU6-687P-201ENST00000516443 89 ntBASIC1.35□□□□□ -2.19
SEMA4AQ9H3S1 AC067940.1-201ENST00000458411 300 ntBASIC1.34□□□□□ -2.19
SEMA4AQ9H3S1 Y_RNA.660-201ENST00000516002 120 ntBASIC1.34□□□□□ -2.19
SEMA4AQ9H3S1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SEMA4AQ9H3S1 MIR200A-201ENST00000384875 90 ntBASIC1.33□□□□□ -2.2
SEMA4AQ9H3S1 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-994P-201ENST00000410507 111 ntBASIC1.33□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-807P-201ENST00000516805 107 ntBASIC1.33□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-303P-201ENST00000517091 106 ntBASIC1.33□□□□□ -2.2
SEMA4AQ9H3S1 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.33□□□□□ -2.2
SEMA4AQ9H3S1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SEMA4AQ9H3S1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 RNU5F-1-201ENST00000362507 117 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-154P-201ENST00000384306 106 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 MIR451A-201ENST00000385059 72 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 Y_RNA.596-201ENST00000410462 109 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 AC074348.1-201ENST00000426503 132 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 AC097635.1-201ENST00000450678 155 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-977P-201ENST00000516411 103 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 Y_RNA.681-201ENST00000516445 113 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 YWHAEP2-201ENST00000580066 112 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 YWHAEP3-201ENST00000582767 121 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 RNU7-10P-201ENST00000607194 63 ntBASIC1.32□□□□□ -2.2
SEMA4AQ9H3S1 SNORD115-31-201ENST00000365318 82 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 SNORA8.1-201ENST00000384250 140 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 MIR519A1-201ENST00000385257 85 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 MIR100-201ENST00000385259 80 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 MIR938-201ENST00000401216 83 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 FABP5P4-201ENST00000437203 171 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-765P-201ENST00000516916 99 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 AC138907.6-201ENST00000568401 126 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 AC138869.1-201ENST00000568623 124 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 AL136317.1-201ENST00000612653 226 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.31□□□□□ -2.2
SEMA4AQ9H3S1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 Y_RNA.32-201ENST00000362589 110 ntBASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-824P-201ENST00000363724 104 ntBASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 SNORD114-27-201ENST00000363766 70 ntBASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-340P-201ENST00000364005 107 ntBASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 Y_RNA.264-201ENST00000364665 102 ntBASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-1241P-201ENST00000384536 107 ntBASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 MIR520F-201ENST00000384824 87 ntBASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 MIR4804-201ENST00000581683 73 ntBASIC1.3□□□□□ -2.2
SEMA4AQ9H3S1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
SEMA4AQ9H3S1 MIR1-1-201ENST00000362147 71 ntBASIC1.29□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-540P-201ENST00000384622 101 ntBASIC1.29□□□□□ -2.2
SEMA4AQ9H3S1 MIR216A-201ENST00000385063 110 ntBASIC1.29□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-587P-201ENST00000391282 106 ntBASIC1.29□□□□□ -2.2
SEMA4AQ9H3S1 RNU7-56P-201ENST00000458744 62 ntBASIC1.29□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-287P-201ENST00000516230 98 ntBASIC1.29□□□□□ -2.2
SEMA4AQ9H3S1 SNORA31.14-201ENST00000516728 116 ntBASIC1.29□□□□□ -2.2
SEMA4AQ9H3S1 MIR5000-201ENST00000577717 103 ntBASIC1.29□□□□□ -2.2
SEMA4AQ9H3S1 RNA5SP457-201ENST00000363657 124 ntBASIC1.28□□□□□ -2.2
SEMA4AQ9H3S1 MIR154-201ENST00000385243 84 ntBASIC1.28□□□□□ -2.2
SEMA4AQ9H3S1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SEMA4AQ9H3S1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SEMA4AQ9H3S1 SNORD30.1-201ENST00000391309 70 ntBASIC1.28□□□□□ -2.2
SEMA4AQ9H3S1 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
SEMA4AQ9H3S1 RNU6-1265P-201ENST00000516342 103 ntBASIC1.28□□□□□ -2.2
SEMA4AQ9H3S1 MIR1297-201ENST00000637311 77 ntBASIC1.28□□□□□ -2.2
SEMA4AQ9H3S1 Y_RNA.258-201ENST00000364613 105 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms