Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNU6-287P-201ENST00000516230 98 ntBASIC1.47□□□□□ -2.17
ZKSCAN3Q9BRR0 MIR3140-201ENST00000583685 90 ntBASIC1.47□□□□□ -2.17
ZKSCAN3Q9BRR0 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
ZKSCAN3Q9BRR0 U3.27-201ENST00000391237 200 ntBASIC1.46□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU6-321P-201ENST00000410912 106 ntBASIC1.46□□□□□ -2.18
ZKSCAN3Q9BRR0 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
ZKSCAN3Q9BRR0 MIR4484-201ENST00000582855 83 ntBASIC1.46□□□□□ -2.18
ZKSCAN3Q9BRR0 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
ZKSCAN3Q9BRR0 AC074348.1-201ENST00000426503 132 ntBASIC1.45□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.45□□□□□ -2.18
ZKSCAN3Q9BRR0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.45□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU6-411P-201ENST00000384451 107 ntBASIC1.44□□□□□ -2.18
ZKSCAN3Q9BRR0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU2-59P-201ENST00000410482 191 ntBASIC1.44□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
ZKSCAN3Q9BRR0 TRMT112P2-201ENST00000512910 132 ntBASIC1.44□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU6-469P-201ENST00000516253 101 ntBASIC1.44□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU7-161P-201ENST00000517289 62 ntBASIC1.44□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU6-681P-201ENST00000364012 104 ntBASIC1.43□□□□□ -2.18
ZKSCAN3Q9BRR0 SNORA24B-201ENST00000384176 131 ntBASIC1.43□□□□□ -2.18
ZKSCAN3Q9BRR0 MIR942-201ENST00000401111 86 ntBASIC1.43□□□□□ -2.18
ZKSCAN3Q9BRR0 MIR2113-201ENST00000459007 91 ntBASIC1.43□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU7-104P-201ENST00000459398 79 ntBASIC1.43□□□□□ -2.18
ZKSCAN3Q9BRR0 AC097510.1-201ENST00000510945 133 ntBASIC1.43□□□□□ -2.18
ZKSCAN3Q9BRR0 Y_RNA.681-201ENST00000516445 113 ntBASIC1.43□□□□□ -2.18
ZKSCAN3Q9BRR0 MIR3134-201ENST00000579433 74 ntBASIC1.43□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU6-340P-201ENST00000364005 107 ntBASIC1.42□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU6-1126P-201ENST00000384002 107 ntBASIC1.42□□□□□ -2.18
ZKSCAN3Q9BRR0 MIR3920-201ENST00000581751 86 ntBASIC1.42□□□□□ -2.18
ZKSCAN3Q9BRR0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ZKSCAN3Q9BRR0 Y_RNA.371-201ENST00000365591 113 ntBASIC1.41□□□□□ -2.18
ZKSCAN3Q9BRR0 MIR216B-201ENST00000390186 82 ntBASIC1.41□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU6-1052P-201ENST00000411398 104 ntBASIC1.41□□□□□ -2.18
ZKSCAN3Q9BRR0 RNU6-719P-201ENST00000516671 104 ntBASIC1.41□□□□□ -2.18
ZKSCAN3Q9BRR0 MIR4639-201ENST00000584938 69 ntBASIC1.41□□□□□ -2.18
ZKSCAN3Q9BRR0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.41□□□□□ -2.18
ZKSCAN3Q9BRR0 AC067863.3-201ENST00000624172 122 ntBASIC1.41□□□□□ -2.18
ZKSCAN3Q9BRR0 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.41□□□□□ -2.18
ZKSCAN3Q9BRR0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ZKSCAN3Q9BRR0 MIR644A-201ENST00000385262 94 ntBASIC1.4□□□□□ -2.19
ZKSCAN3Q9BRR0 Y_RNA.606-201ENST00000410579 103 ntBASIC1.4□□□□□ -2.19
ZKSCAN3Q9BRR0 SNORD124-201ENST00000459577 104 ntBASIC1.4□□□□□ -2.19
ZKSCAN3Q9BRR0 AC025627.3-201ENST00000582078 182 ntBASIC1.4□□□□□ -2.19
ZKSCAN3Q9BRR0 Y_RNA.36-201ENST00000362602 112 ntBASIC1.39□□□□□ -2.19
ZKSCAN3Q9BRR0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.39□□□□□ -2.19
ZKSCAN3Q9BRR0 MIR573-201ENST00000384964 99 ntBASIC1.39□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.39□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU6-70P-201ENST00000516438 60 ntBASIC1.39□□□□□ -2.19
ZKSCAN3Q9BRR0 MIR6078-201ENST00000611069 100 ntBASIC1.39□□□□□ -2.19
ZKSCAN3Q9BRR0 U6.81-201ENST00000612550 106 ntBASIC1.39□□□□□ -2.19
ZKSCAN3Q9BRR0 SNORA25.8-201ENST00000364831 128 ntBASIC1.38□□□□□ -2.19
ZKSCAN3Q9BRR0 SNORD114-24-201ENST00000365029 72 ntBASIC1.38□□□□□ -2.19
ZKSCAN3Q9BRR0 MIR617-201ENST00000385030 97 ntBASIC1.38□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU6-1177P-201ENST00000391058 104 ntBASIC1.38□□□□□ -2.19
ZKSCAN3Q9BRR0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.38□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU6-523P-201ENST00000516304 54 ntBASIC1.38□□□□□ -2.19
ZKSCAN3Q9BRR0 MIR548AG2-201ENST00000581228 64 ntBASIC1.38□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU1-124P-201ENST00000363861 145 ntBASIC1.37□□□□□ -2.19
ZKSCAN3Q9BRR0 SNORD28-201ENST00000384706 75 ntBASIC1.37□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU6-824P-201ENST00000363724 104 ntBASIC1.36□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU6-392P-201ENST00000364926 101 ntBASIC1.36□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU6-154P-201ENST00000384306 106 ntBASIC1.36□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU7-74P-201ENST00000459104 62 ntBASIC1.36□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU6-871P-201ENST00000516122 100 ntBASIC1.36□□□□□ -2.19
ZKSCAN3Q9BRR0 RNA5SP404-201ENST00000517118 132 ntBASIC1.36□□□□□ -2.19
ZKSCAN3Q9BRR0 AC244669.1-204ENST00000621564 178 ntBASIC1.36□□□□□ -2.19
ZKSCAN3Q9BRR0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
ZKSCAN3Q9BRR0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ZKSCAN3Q9BRR0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ZKSCAN3Q9BRR0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
ZKSCAN3Q9BRR0 SNORA8.1-201ENST00000384250 140 ntBASIC1.35□□□□□ -2.19
ZKSCAN3Q9BRR0 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
ZKSCAN3Q9BRR0 AC139453.2-201ENST00000487255 133 ntBASIC1.35□□□□□ -2.19
ZKSCAN3Q9BRR0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
ZKSCAN3Q9BRR0 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
ZKSCAN3Q9BRR0 RNA5SP255-201ENST00000516370 107 ntBASIC1.34□□□□□ -2.19
ZKSCAN3Q9BRR0 RNU6-1015P-201ENST00000517121 99 ntBASIC1.34□□□□□ -2.19
ZKSCAN3Q9BRR0 MIR3612-201ENST00000579753 87 ntBASIC1.34□□□□□ -2.19
ZKSCAN3Q9BRR0 SNORD18A-201ENST00000363753 72 ntBASIC1.33□□□□□ -2.2
ZKSCAN3Q9BRR0 SNORD41.1-201ENST00000391000 69 ntBASIC1.33□□□□□ -2.2
ZKSCAN3Q9BRR0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
ZKSCAN3Q9BRR0 RNU6-1335P-201ENST00000365426 107 ntBASIC1.32□□□□□ -2.2
ZKSCAN3Q9BRR0 MIR519E-201ENST00000385075 84 ntBASIC1.32□□□□□ -2.2
ZKSCAN3Q9BRR0 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
ZKSCAN3Q9BRR0 RNU6-587P-201ENST00000391282 106 ntBASIC1.32□□□□□ -2.2
ZKSCAN3Q9BRR0 MIR548L-201ENST00000408303 86 ntBASIC1.32□□□□□ -2.2
ZKSCAN3Q9BRR0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.32□□□□□ -2.2
ZKSCAN3Q9BRR0 MIR3678-201ENST00000578455 94 ntBASIC1.32□□□□□ -2.2
ZKSCAN3Q9BRR0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
ZKSCAN3Q9BRR0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
ZKSCAN3Q9BRR0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ZKSCAN3Q9BRR0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
ZKSCAN3Q9BRR0 RNU6-274P-201ENST00000459566 107 ntBASIC1.31□□□□□ -2.2
ZKSCAN3Q9BRR0 RNU6-687P-201ENST00000516443 89 ntBASIC1.31□□□□□ -2.2
ZKSCAN3Q9BRR0 RNA5SP47-201ENST00000517230 109 ntBASIC1.31□□□□□ -2.2
ZKSCAN3Q9BRR0 MIR664A-201ENST00000626086 82 ntBASIC1.31□□□□□ -2.2
ZKSCAN3Q9BRR0 RNU6-330P-201ENST00000363015 107 ntBASIC1.3□□□□□ -2.2
ZKSCAN3Q9BRR0 SNORD114-27-201ENST00000363766 70 ntBASIC1.3□□□□□ -2.2
ZKSCAN3Q9BRR0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.3□□□□□ -2.2
ZKSCAN3Q9BRR0 AC114801.3-201ENST00000510231 177 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms