Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MIR3657-201ENST00000584818 117 ntBASIC1.91□□□□□ -2.1
USB1Q9BQ65 AC104984.5-201ENST00000586878 94 ntBASIC1.91□□□□□ -2.1
USB1Q9BQ65 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
USB1Q9BQ65 RNU6-260P-201ENST00000384092 107 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 RNU6V-201ENST00000384105 107 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 MIR633-201ENST00000384821 98 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 MIR644A-201ENST00000385262 94 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 SNORD12-201ENST00000391002 90 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 RNU7-74P-201ENST00000459104 62 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 snoU13.26-201ENST00000459452 105 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 AC002350.1-201ENST00000490759 375 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 RNU6-542P-201ENST00000516405 103 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
USB1Q9BQ65 MIR1261-201ENST00000408659 82 ntBASIC1.89□□□□□ -2.11
USB1Q9BQ65 RNU6-135P-201ENST00000516769 101 ntBASIC1.89□□□□□ -2.11
USB1Q9BQ65 SNORD114-1-201ENST00000362705 72 ntBASIC1.88□□□□□ -2.11
USB1Q9BQ65 Y_RNA.375-201ENST00000365625 101 ntBASIC1.88□□□□□ -2.11
USB1Q9BQ65 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USB1Q9BQ65 SNORD42B-201ENST00000458893 67 ntBASIC1.88□□□□□ -2.11
USB1Q9BQ65 RNU6-645P-201ENST00000364649 106 ntBASIC1.87□□□□□ -2.11
USB1Q9BQ65 MIR7-2-201ENST00000384970 110 ntBASIC1.87□□□□□ -2.11
USB1Q9BQ65 MIR222-201ENST00000384992 110 ntBASIC1.87□□□□□ -2.11
USB1Q9BQ65 MIR504-201ENST00000385065 83 ntBASIC1.87□□□□□ -2.11
USB1Q9BQ65 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.87□□□□□ -2.11
USB1Q9BQ65 RNU6-614P-201ENST00000384369 107 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 AC002429.1-201ENST00000437672 148 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 AC079150.2-201ENST00000443733 78 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 RNU6-469P-201ENST00000516253 101 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 MIR4639-201ENST00000584938 69 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 U6.59-201ENST00000615686 107 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 AC092634.7-201ENST00000621022 103 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 AC244669.1-204ENST00000621564 178 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 SNORA7.1-201ENST00000363750 139 ntBASIC1.85□□□□□ -2.11
USB1Q9BQ65 SNORD41.1-201ENST00000391000 69 ntBASIC1.85□□□□□ -2.11
USB1Q9BQ65 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
USB1Q9BQ65 RNA5SP182-201ENST00000516064 82 ntBASIC1.85□□□□□ -2.11
USB1Q9BQ65 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.85□□□□□ -2.11
USB1Q9BQ65 SNORD28-201ENST00000384706 75 ntBASIC1.84□□□□□ -2.11
USB1Q9BQ65 MIR548L-201ENST00000408303 86 ntBASIC1.84□□□□□ -2.11
USB1Q9BQ65 MIR5002-201ENST00000584713 97 ntBASIC1.84□□□□□ -2.11
USB1Q9BQ65 SNORA64-201ENST00000384674 134 ntBASIC1.83□□□□□ -2.12
USB1Q9BQ65 RNU6-141P-201ENST00000410499 105 ntBASIC1.83□□□□□ -2.12
USB1Q9BQ65 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USB1Q9BQ65 SNORA2.1-201ENST00000363089 137 ntBASIC1.82□□□□□ -2.12
USB1Q9BQ65 SNORD89-201ENST00000390981 114 ntBASIC1.82□□□□□ -2.12
USB1Q9BQ65 MIR4460-201ENST00000577862 86 ntBASIC1.82□□□□□ -2.12
USB1Q9BQ65 MIR6715A-201ENST00000615929 79 ntBASIC1.82□□□□□ -2.12
USB1Q9BQ65 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
USB1Q9BQ65 MT-TY-201ENST00000387409 66 ntBASIC1.81□□□□□ -2.12
USB1Q9BQ65 RNA5SP147-201ENST00000516493 109 ntBASIC1.81□□□□□ -2.12
USB1Q9BQ65 SNORA25.5-201ENST00000363782 126 ntBASIC1.8□□□□□ -2.12
USB1Q9BQ65 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
USB1Q9BQ65 RNU6-1110P-201ENST00000516462 101 ntBASIC1.8□□□□□ -2.12
USB1Q9BQ65 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
USB1Q9BQ65 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USB1Q9BQ65 RNU6-990P-201ENST00000364385 104 ntBASIC1.79□□□□□ -2.12
USB1Q9BQ65 SNORD105-201ENST00000386910 85 ntBASIC1.79□□□□□ -2.12
USB1Q9BQ65 RNA5SP192-201ENST00000364404 120 ntBASIC1.78□□□□□ -2.12
USB1Q9BQ65 RNU6-726P-201ENST00000364680 107 ntBASIC1.78□□□□□ -2.12
USB1Q9BQ65 SNORA25-201ENST00000384384 134 ntBASIC1.78□□□□□ -2.12
USB1Q9BQ65 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
USB1Q9BQ65 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.78□□□□□ -2.12
USB1Q9BQ65 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
USB1Q9BQ65 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USB1Q9BQ65 RNA5SP160-201ENST00000364866 120 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 SCARNA21.1-201ENST00000515996 128 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 RNU6-656P-201ENST00000516785 107 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 SNORA40.17-201ENST00000517256 115 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 MIR7843-201ENST00000622274 79 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.77□□□□□ -2.13
USB1Q9BQ65 RNU6-940P-201ENST00000363433 104 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNA5SP215-201ENST00000363440 122 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 SNORD18A-201ENST00000363753 72 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNU1-141P-201ENST00000364623 158 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNU6-716P-201ENST00000365621 103 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNA5SP299-201ENST00000391203 116 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 SNORA26.9-201ENST00000391322 122 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 FABP5P4-201ENST00000437203 171 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNA5SP47-201ENST00000517230 109 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 MIR466-201ENST00000580653 84 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 MIR6739-201ENST00000622461 75 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNU6-829P-201ENST00000363700 112 ntBASIC1.75□□□□□ -2.13
USB1Q9BQ65 RNU6-1335P-201ENST00000365426 107 ntBASIC1.75□□□□□ -2.13
USB1Q9BQ65 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
USB1Q9BQ65 snoU13.23-201ENST00000458863 104 ntBASIC1.75□□□□□ -2.13
USB1Q9BQ65 U7.7-201ENST00000459276 60 ntBASIC1.75□□□□□ -2.13
USB1Q9BQ65 RNA5SP327-201ENST00000362494 101 ntBASIC1.74□□□□□ -2.13
USB1Q9BQ65 RNU6-1079P-201ENST00000362861 110 ntBASIC1.74□□□□□ -2.13
USB1Q9BQ65 SNORD114-4-201ENST00000363962 75 ntBASIC1.74□□□□□ -2.13
USB1Q9BQ65 MIR583-201ENST00000384846 75 ntBASIC1.74□□□□□ -2.13
USB1Q9BQ65 AC108210.2-201ENST00000503681 201 ntBASIC1.74□□□□□ -2.13
USB1Q9BQ65 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
USB1Q9BQ65 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
USB1Q9BQ65 RNU6-1089P-201ENST00000516473 104 ntBASIC1.73□□□□□ -2.13
USB1Q9BQ65 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.73□□□□□ -2.13
USB1Q9BQ65 AC018659.1-201ENST00000551083 169 ntBASIC1.73□□□□□ -2.13
USB1Q9BQ65 MIR3678-201ENST00000578455 94 ntBASIC1.73□□□□□ -2.13
USB1Q9BQ65 MIR4285-201ENST00000581001 85 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms