Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-364P-201ENST00000384387 107 ntBASIC1.34□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.34□□□□□ -2.19
CDK5RAP1Q96SZ6 AC125388.1-201ENST00000459631 156 ntBASIC1.34□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-287P-201ENST00000516230 98 ntBASIC1.34□□□□□ -2.19
CDK5RAP1Q96SZ6 AC106800.4-201ENST00000614905 153 ntBASIC1.34□□□□□ -2.19
CDK5RAP1Q96SZ6 AC027335.2-201ENST00000624030 375 ntBASIC1.34□□□□□ -2.19
CDK5RAP1Q96SZ6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 Y_RNA.32-201ENST00000362589 110 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6-800P-201ENST00000384473 103 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6-910P-201ENST00000390844 107 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6-663P-201ENST00000391105 106 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6-935P-201ENST00000410371 100 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 AC138907.6-201ENST00000568401 126 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 AC138869.1-201ENST00000568623 124 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 MIR548AG2-201ENST00000581228 64 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 U6.111-201ENST00000636093 83 ntBASIC1.33□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU7-21P-201ENST00000459430 62 ntBASIC1.32□□□□□ -2.2
CDK5RAP1Q96SZ6 SNORA31.14-201ENST00000516728 116 ntBASIC1.32□□□□□ -2.2
CDK5RAP1Q96SZ6 MIR4804-201ENST00000581683 73 ntBASIC1.32□□□□□ -2.2
CDK5RAP1Q96SZ6 U6.81-201ENST00000612550 106 ntBASIC1.32□□□□□ -2.2
CDK5RAP1Q96SZ6 MIR4773-1-201ENST00000637203 78 ntBASIC1.32□□□□□ -2.2
CDK5RAP1Q96SZ6 SNORD115-22-201ENST00000364456 82 ntBASIC1.31□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6-382P-201ENST00000365181 106 ntBASIC1.31□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
CDK5RAP1Q96SZ6 MIR938-201ENST00000401216 83 ntBASIC1.31□□□□□ -2.2
CDK5RAP1Q96SZ6 MIR3675-201ENST00000583661 73 ntBASIC1.31□□□□□ -2.2
CDK5RAP1Q96SZ6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CDK5RAP1Q96SZ6 AL109933.3-201ENST00000619095 188 ntBASIC1.31□□□□□ -2.2
CDK5RAP1Q96SZ6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDK5RAP1Q96SZ6 SNORD45.1-201ENST00000363181 77 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 Y_RNA.205-201ENST00000364128 113 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 RNY4P3-201ENST00000365254 95 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 MIR9-2-201ENST00000384838 87 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6-604P-201ENST00000390917 100 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 SNORD111-201ENST00000408139 94 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6-994P-201ENST00000410507 111 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 Y_RNA.606-201ENST00000410579 103 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU7-56P-201ENST00000458744 62 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6-977P-201ENST00000516411 103 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 AC005520.4-201ENST00000604337 90 ntBASIC1.3□□□□□ -2.2
CDK5RAP1Q96SZ6 MIR520F-201ENST00000384824 87 ntBASIC1.29□□□□□ -2.2
CDK5RAP1Q96SZ6 MIR100-201ENST00000385259 80 ntBASIC1.29□□□□□ -2.2
CDK5RAP1Q96SZ6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.29□□□□□ -2.2
CDK5RAP1Q96SZ6 AC097510.1-201ENST00000510945 133 ntBASIC1.29□□□□□ -2.2
CDK5RAP1Q96SZ6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.29□□□□□ -2.2
CDK5RAP1Q96SZ6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.29□□□□□ -2.2
CDK5RAP1Q96SZ6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
CDK5RAP1Q96SZ6 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU6-1177P-201ENST00000391058 104 ntBASIC1.28□□□□□ -2.2
CDK5RAP1Q96SZ6 AL591704.2-201ENST00000421658 181 ntBASIC1.28□□□□□ -2.2
CDK5RAP1Q96SZ6 AC244505.6-201ENST00000452829 130 ntBASIC1.28□□□□□ -2.2
CDK5RAP1Q96SZ6 SNORD79.1-201ENST00000516069 84 ntBASIC1.28□□□□□ -2.2
CDK5RAP1Q96SZ6 RNU7-161P-201ENST00000517289 62 ntBASIC1.28□□□□□ -2.2
CDK5RAP1Q96SZ6 NAMPTP3-201ENST00000569273 224 ntBASIC1.28□□□□□ -2.2
CDK5RAP1Q96SZ6 MIR4781-201ENST00000585250 76 ntBASIC1.28□□□□□ -2.2
CDK5RAP1Q96SZ6 uc_338.16-201ENST00000621804 95 ntBASIC1.28□□□□□ -2.2
CDK5RAP1Q96SZ6 SNORD115-24-201ENST00000363528 82 ntBASIC1.27□□□□□ -2.21
CDK5RAP1Q96SZ6 SNORD116-24-201ENST00000384549 92 ntBASIC1.27□□□□□ -2.21
CDK5RAP1Q96SZ6 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
CDK5RAP1Q96SZ6 AL078603.1-201ENST00000603824 313 ntBASIC1.27□□□□□ -2.21
CDK5RAP1Q96SZ6 MIR203A-201ENST00000384836 110 ntBASIC1.26□□□□□ -2.21
CDK5RAP1Q96SZ6 MIR644A-201ENST00000385262 94 ntBASIC1.26□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU1-119P-201ENST00000391122 165 ntBASIC1.26□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU6-630P-201ENST00000391258 106 ntBASIC1.26□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU2-59P-201ENST00000410482 191 ntBASIC1.26□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU6-982P-201ENST00000516216 102 ntBASIC1.26□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU6-881P-201ENST00000516813 102 ntBASIC1.26□□□□□ -2.21
CDK5RAP1Q96SZ6 AL136317.1-201ENST00000612653 226 ntBASIC1.26□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU7-104P-201ENST00000459398 79 ntBASIC1.25□□□□□ -2.21
CDK5RAP1Q96SZ6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
CDK5RAP1Q96SZ6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CDK5RAP1Q96SZ6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.25□□□□□ -2.21
CDK5RAP1Q96SZ6 SNORD113.1-201ENST00000363280 73 ntBASIC1.24□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU6-681P-201ENST00000364012 104 ntBASIC1.24□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU6-1126P-201ENST00000384002 107 ntBASIC1.24□□□□□ -2.21
CDK5RAP1Q96SZ6 SNORA80D-201ENST00000384488 135 ntBASIC1.24□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU7-90P-201ENST00000459216 62 ntBASIC1.24□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU7-13P-201ENST00000516413 62 ntBASIC1.24□□□□□ -2.21
CDK5RAP1Q96SZ6 MIR3920-201ENST00000581751 86 ntBASIC1.24□□□□□ -2.21
CDK5RAP1Q96SZ6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.24□□□□□ -2.21
CDK5RAP1Q96SZ6 RMST_2.1-201ENST00000617263 136 ntBASIC1.24□□□□□ -2.21
CDK5RAP1Q96SZ6 RNA5SP403-201ENST00000363598 108 ntBASIC1.23□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU6-54P-201ENST00000365563 107 ntBASIC1.23□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU6-895P-201ENST00000384125 103 ntBASIC1.23□□□□□ -2.21
CDK5RAP1Q96SZ6 AC244098.3-201ENST00000424803 96 ntBASIC1.23□□□□□ -2.21
CDK5RAP1Q96SZ6 Y_RNA.676-201ENST00000516393 96 ntBASIC1.23□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU6-1057P-201ENST00000517162 102 ntBASIC1.23□□□□□ -2.21
CDK5RAP1Q96SZ6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CDK5RAP1Q96SZ6 MIR1-1-201ENST00000362147 71 ntBASIC1.22□□□□□ -2.21
CDK5RAP1Q96SZ6 Y_RNA.443-201ENST00000384135 111 ntBASIC1.22□□□□□ -2.21
CDK5RAP1Q96SZ6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.22□□□□□ -2.21
CDK5RAP1Q96SZ6 RNU6-274P-201ENST00000459566 107 ntBASIC1.22□□□□□ -2.21
CDK5RAP1Q96SZ6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.21
CDK5RAP1Q96SZ6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms