Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 RNU6-455P-201ENST00000384681 107 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 MIR577-201ENST00000385196 96 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 RNU6-816P-201ENST00000390914 107 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 RNA5SP136-201ENST00000410906 107 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 RNU6-762P-201ENST00000517107 102 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 RNA5SP169-201ENST00000517268 117 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 U7.2-201ENST00000607576 63 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 AL442128.1-201ENST00000615151 90 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 AC025521.1-201ENST00000621624 286 ntBASIC-0.33□□□□□ -2.46
ZNF560Q96MR9 MTND5P18-201ENST00000445624 1801 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 SNORD114-29-201ENST00000364819 70 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 SNORD101-201ENST00000384027 73 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 RNU6-409P-201ENST00000384114 104 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 SNORD56B-201ENST00000384713 71 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 MT-TG-201ENST00000387429 68 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 MTND4LP9-201ENST00000427694 174 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 MIR548O2-201ENST00000616090 70 ntBASIC-0.34□□□□□ -2.46
ZNF560Q96MR9 RNU6-664P-201ENST00000362381 107 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 MIR196A2-201ENST00000385189 110 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 RNU6-772P-201ENST00000516042 105 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 IGLVI-20-201ENST00000519296 130 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 AP000676.1-201ENST00000533307 52 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 AC025166.1-201ENST00000612411 163 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 FTX_2.1-201ENST00000618816 94 ntBASIC-0.35□□□□□ -2.47
ZNF560Q96MR9 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 SNORD114-31-201ENST00000363219 75 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 RNU6-886P-201ENST00000384319 105 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 RNU6-480P-201ENST00000384332 107 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 RNU6-466P-201ENST00000391224 103 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 RNU7-85P-201ENST00000458851 63 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 SNORD42B-201ENST00000458893 67 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 RNU7-107P-201ENST00000459121 61 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 SNORD126-201ENST00000459475 77 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 MIR4432-201ENST00000581823 84 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 MIR4719-201ENST00000585233 84 ntBASIC-0.36□□□□□ -2.47
ZNF560Q96MR9 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 RNU6-132P-201ENST00000383863 107 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 MIR451A-201ENST00000385059 72 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 MIR548E-201ENST00000408287 88 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 RNU6-935P-201ENST00000410371 100 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 AL445193.1-201ENST00000441183 141 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 snoU13.13-201ENST00000458842 104 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 MIR8064-201ENST00000612863 90 ntBASIC-0.37□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 RNU6-257P-201ENST00000410238 98 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 AC096531.1-201ENST00000419107 107 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 AC114755.3-201ENST00000481111 251 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 RNU6-346P-201ENST00000516288 111 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 MIR548Z-201ENST00000584743 97 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 RNU6-86P-201ENST00000606534 107 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.38□□□□□ -2.47
ZNF560Q96MR9 MIR20A-201ENST00000362279 71 ntBASIC-0.39□□□□□ -2.47
ZNF560Q96MR9 SNORD14C-201ENST00000365382 88 ntBASIC-0.39□□□□□ -2.47
ZNF560Q96MR9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.39□□□□□ -2.47
ZNF560Q96MR9 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.39□□□□□ -2.47
ZNF560Q96MR9 RNU6-255P-201ENST00000516957 105 ntBASIC-0.39□□□□□ -2.47
ZNF560Q96MR9 AL513043.2-201ENST00000573941 143 ntBASIC-0.39□□□□□ -2.47
ZNF560Q96MR9 MIR4645-201ENST00000583158 77 ntBASIC-0.39□□□□□ -2.47
ZNF560Q96MR9 RNU6-832P-201ENST00000363319 107 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 RNY4P6-201ENST00000363667 96 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 SNORD50.2-201ENST00000365465 70 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 SNORD90-201ENST00000391145 111 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 AC244090.1-201ENST00000441884 93 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 RNU7-200P-201ENST00000516105 62 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 SNORD33.1-201ENST00000516213 88 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 RNU6-719P-201ENST00000516671 104 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 RNA5SP66-201ENST00000517178 101 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 MIR4694-201ENST00000578534 80 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 MIR4263-201ENST00000584745 83 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 MIR4436A-201ENST00000585278 85 ntBASIC-0.4□□□□□ -2.47
ZNF560Q96MR9 SNORD115-25-201ENST00000362619 82 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 RNU6-476P-201ENST00000384726 107 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 MIR1912-201ENST00000410389 80 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 222.9 ms