Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SNORA2.1-201ENST00000363089 137 ntBASIC2.3□□□□□ -2.04
LRCH3Q96II8 SNORD111-201ENST00000408139 94 ntBASIC2.3□□□□□ -2.04
LRCH3Q96II8 AC067940.1-201ENST00000458411 300 ntBASIC2.3□□□□□ -2.04
LRCH3Q96II8 AC048334.1-201ENST00000477975 159 ntBASIC2.3□□□□□ -2.04
LRCH3Q96II8 RNU6-1089P-201ENST00000516473 104 ntBASIC2.3□□□□□ -2.04
LRCH3Q96II8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.3□□□□□ -2.04
LRCH3Q96II8 MIR6734-201ENST00000621166 68 ntBASIC2.3□□□□□ -2.04
LRCH3Q96II8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRCH3Q96II8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LRCH3Q96II8 SNORD1A-201ENST00000364968 72 ntBASIC2.29□□□□□ -2.04
LRCH3Q96II8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
LRCH3Q96II8 RNA5SP147-201ENST00000516493 109 ntBASIC2.29□□□□□ -2.04
LRCH3Q96II8 MIR4713-201ENST00000582691 75 ntBASIC2.29□□□□□ -2.04
LRCH3Q96II8 uc_338.16-201ENST00000621804 95 ntBASIC2.29□□□□□ -2.04
LRCH3Q96II8 SNORD60.1-201ENST00000362451 73 ntBASIC2.28□□□□□ -2.04
LRCH3Q96II8 RNU7-104P-201ENST00000459398 79 ntBASIC2.28□□□□□ -2.04
LRCH3Q96II8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.28□□□□□ -2.04
LRCH3Q96II8 MIR4804-201ENST00000581683 73 ntBASIC2.28□□□□□ -2.04
LRCH3Q96II8 MIR548V-201ENST00000584165 80 ntBASIC2.28□□□□□ -2.04
LRCH3Q96II8 MIR6766-201ENST00000622641 72 ntBASIC2.28□□□□□ -2.04
LRCH3Q96II8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
LRCH3Q96II8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
LRCH3Q96II8 RNU6-990P-201ENST00000364385 104 ntBASIC2.27□□□□□ -2.05
LRCH3Q96II8 RNU6V-201ENST00000384105 107 ntBASIC2.27□□□□□ -2.05
LRCH3Q96II8 AC079140.2-201ENST00000506193 142 ntBASIC2.27□□□□□ -2.05
LRCH3Q96II8 RNA5SP182-201ENST00000516064 82 ntBASIC2.27□□□□□ -2.05
LRCH3Q96II8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.26□□□□□ -2.05
LRCH3Q96II8 RNU6-302P-201ENST00000365249 107 ntBASIC2.26□□□□□ -2.05
LRCH3Q96II8 snoU13.9-201ENST00000458927 103 ntBASIC2.26□□□□□ -2.05
LRCH3Q96II8 RNA5SP200-201ENST00000516360 103 ntBASIC2.26□□□□□ -2.05
LRCH3Q96II8 MIR3937-201ENST00000580135 106 ntBASIC2.26□□□□□ -2.05
LRCH3Q96II8 MIR4303-201ENST00000581299 66 ntBASIC2.26□□□□□ -2.05
LRCH3Q96II8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.26□□□□□ -2.05
LRCH3Q96II8 AL157834.3-201ENST00000615543 103 ntBASIC2.26□□□□□ -2.05
LRCH3Q96II8 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
LRCH3Q96II8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LRCH3Q96II8 RNU6-1065P-201ENST00000384513 106 ntBASIC2.25□□□□□ -2.05
LRCH3Q96II8 RNU7-56P-201ENST00000458744 62 ntBASIC2.25□□□□□ -2.05
LRCH3Q96II8 RNU1-123P-201ENST00000458950 160 ntBASIC2.25□□□□□ -2.05
LRCH3Q96II8 RNA5SP220-201ENST00000516298 104 ntBASIC2.25□□□□□ -2.05
LRCH3Q96II8 MIR4452-201ENST00000583004 71 ntBASIC2.25□□□□□ -2.05
LRCH3Q96II8 MIR6739-201ENST00000622461 75 ntBASIC2.25□□□□□ -2.05
LRCH3Q96II8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LRCH3Q96II8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LRCH3Q96II8 Y_RNA.363-201ENST00000365529 113 ntBASIC2.24□□□□□ -2.05
LRCH3Q96II8 RNU1-119P-201ENST00000391122 165 ntBASIC2.24□□□□□ -2.05
LRCH3Q96II8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
LRCH3Q96II8 SNORA25.15-201ENST00000516487 89 ntBASIC2.24□□□□□ -2.05
LRCH3Q96II8 MIR4287-201ENST00000579398 78 ntBASIC2.24□□□□□ -2.05
LRCH3Q96II8 RNU6-1312P-201ENST00000362425 108 ntBASIC2.23□□□□□ -2.05
LRCH3Q96II8 Y_RNA.174-201ENST00000363781 105 ntBASIC2.23□□□□□ -2.05
LRCH3Q96II8 AC025033.1-201ENST00000463883 194 ntBASIC2.23□□□□□ -2.05
LRCH3Q96II8 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
LRCH3Q96II8 AL512310.8-201ENST00000550183 120 ntBASIC2.23□□□□□ -2.05
LRCH3Q96II8 MIR6895-201ENST00000613497 78 ntBASIC2.23□□□□□ -2.05
LRCH3Q96II8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LRCH3Q96II8 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
LRCH3Q96II8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LRCH3Q96II8 RNU4-88P-201ENST00000411220 86 ntBASIC2.22□□□□□ -2.05
LRCH3Q96II8 AC104435.1-201ENST00000483483 166 ntBASIC2.22□□□□□ -2.05
LRCH3Q96II8 Y_RNA.327-201ENST00000365201 102 ntBASIC2.21□□□□□ -2.06
LRCH3Q96II8 RNU6-994P-201ENST00000410507 111 ntBASIC2.21□□□□□ -2.06
LRCH3Q96II8 SNORA31.2-201ENST00000516019 134 ntBASIC2.21□□□□□ -2.06
LRCH3Q96II8 ZNF355P-201ENST00000427301 3216 ntBASIC2.21□□□□□ -2.06
LRCH3Q96II8 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
LRCH3Q96II8 SNORD33-201ENST00000362761 85 ntBASIC2.2□□□□□ -2.06
LRCH3Q96II8 MIR630-201ENST00000384957 97 ntBASIC2.2□□□□□ -2.06
LRCH3Q96II8 AC003989.2-201ENST00000440224 169 ntBASIC2.2□□□□□ -2.06
LRCH3Q96II8 AL157398.1-201ENST00000452981 186 ntBASIC2.2□□□□□ -2.06
LRCH3Q96II8 RNU7-95P-201ENST00000459222 64 ntBASIC2.2□□□□□ -2.06
LRCH3Q96II8 MIR8081-201ENST00000611533 95 ntBASIC2.2□□□□□ -2.06
LRCH3Q96II8 AC067863.3-201ENST00000624172 122 ntBASIC2.2□□□□□ -2.06
LRCH3Q96II8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LRCH3Q96II8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LRCH3Q96II8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.19□□□□□ -2.06
LRCH3Q96II8 MIR4299-201ENST00000577899 72 ntBASIC2.19□□□□□ -2.06
LRCH3Q96II8 MIR100-201ENST00000385259 80 ntBASIC2.18□□□□□ -2.06
LRCH3Q96II8 MIR934-201ENST00000401241 83 ntBASIC2.18□□□□□ -2.06
LRCH3Q96II8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.17□□□□□ -2.06
LRCH3Q96II8 RNU6-392P-201ENST00000364926 101 ntBASIC2.17□□□□□ -2.06
LRCH3Q96II8 MIR548C-201ENST00000384815 97 ntBASIC2.17□□□□□ -2.06
LRCH3Q96II8 AL591704.2-201ENST00000421658 181 ntBASIC2.17□□□□□ -2.06
LRCH3Q96II8 RNU7-21P-201ENST00000459430 62 ntBASIC2.17□□□□□ -2.06
LRCH3Q96II8 Y_RNA.178-201ENST00000363832 102 ntBASIC2.16□□□□□ -2.06
LRCH3Q96II8 MIR520F-201ENST00000384824 87 ntBASIC2.16□□□□□ -2.06
LRCH3Q96II8 RN7SKP88-201ENST00000516847 250 ntBASIC2.16□□□□□ -2.06
LRCH3Q96II8 AC018659.1-201ENST00000551083 169 ntBASIC2.16□□□□□ -2.06
LRCH3Q96II8 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
LRCH3Q96II8 7SK.8-201ENST00000612110 250 ntBASIC2.16□□□□□ -2.06
LRCH3Q96II8 AL136317.1-201ENST00000612653 226 ntBASIC2.16□□□□□ -2.06
LRCH3Q96II8 7SK.11-201ENST00000615477 250 ntBASIC2.16□□□□□ -2.06
LRCH3Q96II8 PVT1_3.1-201ENST00000620853 95 ntBASIC2.16□□□□□ -2.06
LRCH3Q96II8 7SK.13-201ENST00000622040 250 ntBASIC2.16□□□□□ -2.06
LRCH3Q96II8 Y_RNA.379-201ENST00000365653 102 ntBASIC2.15□□□□□ -2.07
LRCH3Q96II8 MIR30A-201ENST00000385092 71 ntBASIC2.15□□□□□ -2.07
LRCH3Q96II8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.15□□□□□ -2.07
LRCH3Q96II8 MIR5002-201ENST00000584713 97 ntBASIC2.15□□□□□ -2.07
LRCH3Q96II8 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
LRCH3Q96II8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.07
LRCH3Q96II8 MT-TY-201ENST00000387409 66 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 550.1 ms