Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNU7-13P-201ENST00000516413 62 ntBASIC1.64□□□□□ -2.15
IFT43Q96FT9 Y_RNA.32-201ENST00000362589 110 ntBASIC1.63□□□□□ -2.15
IFT43Q96FT9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
IFT43Q96FT9 U6.81-201ENST00000612550 106 ntBASIC1.63□□□□□ -2.15
IFT43Q96FT9 SNORD115-24-201ENST00000363528 82 ntBASIC1.62□□□□□ -2.15
IFT43Q96FT9 RNU6-1241P-201ENST00000384536 107 ntBASIC1.62□□□□□ -2.15
IFT43Q96FT9 MIR154-201ENST00000385243 84 ntBASIC1.62□□□□□ -2.15
IFT43Q96FT9 RNU4-62P-201ENST00000410125 130 ntBASIC1.62□□□□□ -2.15
IFT43Q96FT9 MIR3675-201ENST00000583661 73 ntBASIC1.62□□□□□ -2.15
IFT43Q96FT9 AL136317.1-201ENST00000612653 226 ntBASIC1.62□□□□□ -2.15
IFT43Q96FT9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.62□□□□□ -2.15
IFT43Q96FT9 RNU6-330P-201ENST00000363015 107 ntBASIC1.61□□□□□ -2.15
IFT43Q96FT9 RNA5SP403-201ENST00000363598 108 ntBASIC1.61□□□□□ -2.15
IFT43Q96FT9 SNORD53B-201ENST00000577887 78 ntBASIC1.61□□□□□ -2.15
IFT43Q96FT9 RNU6-824P-201ENST00000363724 104 ntBASIC1.6□□□□□ -2.15
IFT43Q96FT9 MIR216B-201ENST00000390186 82 ntBASIC1.6□□□□□ -2.15
IFT43Q96FT9 RNU6-1177P-201ENST00000391058 104 ntBASIC1.6□□□□□ -2.15
IFT43Q96FT9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.6□□□□□ -2.15
IFT43Q96FT9 MIR4303-201ENST00000581299 66 ntBASIC1.6□□□□□ -2.15
IFT43Q96FT9 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
IFT43Q96FT9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
IFT43Q96FT9 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.6□□□□□ -2.15
IFT43Q96FT9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
IFT43Q96FT9 RNU6-649P-201ENST00000384463 107 ntBASIC1.59□□□□□ -2.15
IFT43Q96FT9 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
IFT43Q96FT9 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
IFT43Q96FT9 SNORD89-201ENST00000390981 114 ntBASIC1.59□□□□□ -2.15
IFT43Q96FT9 FABP5P4-201ENST00000437203 171 ntBASIC1.59□□□□□ -2.15
IFT43Q96FT9 MIR2113-201ENST00000459007 91 ntBASIC1.59□□□□□ -2.15
IFT43Q96FT9 RNU6-321P-201ENST00000410912 106 ntBASIC1.58□□□□□ -2.16
IFT43Q96FT9 MIR337-201ENST00000362281 93 ntBASIC1.57□□□□□ -2.16
IFT43Q96FT9 RNA5SP117-201ENST00000365294 118 ntBASIC1.57□□□□□ -2.16
IFT43Q96FT9 RNU6-1126P-201ENST00000384002 107 ntBASIC1.57□□□□□ -2.16
IFT43Q96FT9 MIR19B1-201ENST00000384829 87 ntBASIC1.57□□□□□ -2.16
IFT43Q96FT9 RNU7-95P-201ENST00000459222 64 ntBASIC1.57□□□□□ -2.16
IFT43Q96FT9 U7.7-201ENST00000459276 60 ntBASIC1.57□□□□□ -2.16
IFT43Q96FT9 AC002350.1-201ENST00000490759 375 ntBASIC1.57□□□□□ -2.16
IFT43Q96FT9 RNU6-135P-201ENST00000516769 101 ntBASIC1.57□□□□□ -2.16
IFT43Q96FT9 RNU7-161P-201ENST00000517289 62 ntBASIC1.57□□□□□ -2.16
IFT43Q96FT9 MIR3920-201ENST00000581751 86 ntBASIC1.57□□□□□ -2.16
IFT43Q96FT9 SNORD30.1-201ENST00000391309 70 ntBASIC1.56□□□□□ -2.16
IFT43Q96FT9 RNU6-540P-201ENST00000384622 101 ntBASIC1.55□□□□□ -2.16
IFT43Q96FT9 SNORD105-201ENST00000386910 85 ntBASIC1.55□□□□□ -2.16
IFT43Q96FT9 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
IFT43Q96FT9 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
IFT43Q96FT9 RNU6-274P-201ENST00000459566 107 ntBASIC1.55□□□□□ -2.16
IFT43Q96FT9 RNU6-752P-201ENST00000516376 102 ntBASIC1.55□□□□□ -2.16
IFT43Q96FT9 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
IFT43Q96FT9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.54□□□□□ -2.16
IFT43Q96FT9 SNORD26-201ENST00000384147 75 ntBASIC1.54□□□□□ -2.16
IFT43Q96FT9 MIR617-201ENST00000385030 97 ntBASIC1.54□□□□□ -2.16
IFT43Q96FT9 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
IFT43Q96FT9 RNU7-104P-201ENST00000459398 79 ntBASIC1.54□□□□□ -2.16
IFT43Q96FT9 AC125388.1-201ENST00000459631 156 ntBASIC1.54□□□□□ -2.16
IFT43Q96FT9 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.54□□□□□ -2.16
IFT43Q96FT9 MIR8053-201ENST00000613344 75 ntBASIC1.54□□□□□ -2.16
IFT43Q96FT9 AC067863.3-201ENST00000624172 122 ntBASIC1.54□□□□□ -2.16
IFT43Q96FT9 MIR4773-1-201ENST00000637203 78 ntBASIC1.54□□□□□ -2.16
IFT43Q96FT9 RNU1-42P-201ENST00000364033 160 ntBASIC1.53□□□□□ -2.16
IFT43Q96FT9 MIR200A-201ENST00000384875 90 ntBASIC1.53□□□□□ -2.16
IFT43Q96FT9 RNA5SP247-201ENST00000411181 105 ntBASIC1.53□□□□□ -2.16
IFT43Q96FT9 TRMT112P2-201ENST00000512910 132 ntBASIC1.53□□□□□ -2.16
IFT43Q96FT9 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
IFT43Q96FT9 MIR548AG2-201ENST00000581228 64 ntBASIC1.53□□□□□ -2.16
IFT43Q96FT9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
IFT43Q96FT9 SNORD115-31-201ENST00000365318 82 ntBASIC1.52□□□□□ -2.17
IFT43Q96FT9 MIR1323-201ENST00000408090 73 ntBASIC1.52□□□□□ -2.17
IFT43Q96FT9 RNU6-469P-201ENST00000516253 101 ntBASIC1.52□□□□□ -2.17
IFT43Q96FT9 AL078603.1-201ENST00000603824 313 ntBASIC1.52□□□□□ -2.17
IFT43Q96FT9 SNORD45.1-201ENST00000363181 77 ntBASIC1.51□□□□□ -2.17
IFT43Q96FT9 RNU6-382P-201ENST00000365181 106 ntBASIC1.51□□□□□ -2.17
IFT43Q96FT9 RNU6-663P-201ENST00000391105 106 ntBASIC1.51□□□□□ -2.17
IFT43Q96FT9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.51□□□□□ -2.17
IFT43Q96FT9 RNU7-74P-201ENST00000459104 62 ntBASIC1.51□□□□□ -2.17
IFT43Q96FT9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.51□□□□□ -2.17
IFT43Q96FT9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
IFT43Q96FT9 MIR644A-201ENST00000385262 94 ntBASIC1.5□□□□□ -2.17
IFT43Q96FT9 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
IFT43Q96FT9 SNORD124-201ENST00000459577 104 ntBASIC1.5□□□□□ -2.17
IFT43Q96FT9 MIR4639-201ENST00000584938 69 ntBASIC1.5□□□□□ -2.17
IFT43Q96FT9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.5□□□□□ -2.17
IFT43Q96FT9 U6.111-201ENST00000636093 83 ntBASIC1.5□□□□□ -2.17
IFT43Q96FT9 Y_RNA.258-201ENST00000364613 105 ntBASIC1.49□□□□□ -2.17
IFT43Q96FT9 Y_RNA.340-201ENST00000365330 92 ntBASIC1.49□□□□□ -2.17
IFT43Q96FT9 RNU6-895P-201ENST00000384125 103 ntBASIC1.49□□□□□ -2.17
IFT43Q96FT9 MIR150-201ENST00000385048 84 ntBASIC1.49□□□□□ -2.17
IFT43Q96FT9 RNU7-24P-201ENST00000458867 62 ntBASIC1.49□□□□□ -2.17
IFT43Q96FT9 RNU1-123P-201ENST00000458950 160 ntBASIC1.49□□□□□ -2.17
IFT43Q96FT9 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
IFT43Q96FT9 RNU6-800P-201ENST00000384473 103 ntBASIC1.48□□□□□ -2.17
IFT43Q96FT9 MIR519E-201ENST00000385075 84 ntBASIC1.48□□□□□ -2.17
IFT43Q96FT9 SNORD75.2-201ENST00000408784 58 ntBASIC1.48□□□□□ -2.17
IFT43Q96FT9 AC244098.3-201ENST00000424803 96 ntBASIC1.48□□□□□ -2.17
IFT43Q96FT9 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
IFT43Q96FT9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
IFT43Q96FT9 SNORA7.1-201ENST00000363750 139 ntBASIC1.47□□□□□ -2.17
IFT43Q96FT9 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
IFT43Q96FT9 SNORD28-201ENST00000384706 75 ntBASIC1.47□□□□□ -2.17
IFT43Q96FT9 AL691482.2-201ENST00000457453 84 ntBASIC1.47□□□□□ -2.17
IFT43Q96FT9 MIR4421-201ENST00000578133 69 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms