Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AL109933.3-201ENST00000619095 188 ntBASIC0.59□□□□□ -2.31
RAPGEF4Q8WZA2 AC067863.3-201ENST00000624172 122 ntBASIC0.59□□□□□ -2.31
RAPGEF4Q8WZA2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
RAPGEF4Q8WZA2 RNU6-716P-201ENST00000365621 103 ntBASIC0.58□□□□□ -2.32
RAPGEF4Q8WZA2 MTATP8P2-201ENST00000435212 202 ntBASIC0.58□□□□□ -2.32
RAPGEF4Q8WZA2 RNU7-104P-201ENST00000459398 79 ntBASIC0.58□□□□□ -2.32
RAPGEF4Q8WZA2 RNA5SP227-201ENST00000516184 113 ntBASIC0.58□□□□□ -2.32
RAPGEF4Q8WZA2 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
RAPGEF4Q8WZA2 AP001318.4-201ENST00000616637 121 ntBASIC0.58□□□□□ -2.32
RAPGEF4Q8WZA2 SNORD58A-201ENST00000383875 65 ntBASIC0.57□□□□□ -2.32
RAPGEF4Q8WZA2 RNU6-32P-201ENST00000383948 107 ntBASIC0.57□□□□□ -2.32
RAPGEF4Q8WZA2 RNU6-13P-201ENST00000384248 107 ntBASIC0.57□□□□□ -2.32
RAPGEF4Q8WZA2 RNU6-12P-201ENST00000384604 107 ntBASIC0.57□□□□□ -2.32
RAPGEF4Q8WZA2 RNU6-41P-201ENST00000384741 107 ntBASIC0.57□□□□□ -2.32
RAPGEF4Q8WZA2 SNORD71-201ENST00000411292 86 ntBASIC0.57□□□□□ -2.32
RAPGEF4Q8WZA2 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
RAPGEF4Q8WZA2 TRDV1-202ENST00000621643 102 ntBASIC0.57□□□□□ -2.32
RAPGEF4Q8WZA2 MIR2052-201ENST00000636055 55 ntBASIC0.57□□□□□ -2.32
RAPGEF4Q8WZA2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
RAPGEF4Q8WZA2 SNORD115-44-201ENST00000365391 82 ntBASIC0.56□□□□□ -2.32
RAPGEF4Q8WZA2 RNU6-1126P-201ENST00000384002 107 ntBASIC0.56□□□□□ -2.32
RAPGEF4Q8WZA2 RNU6-466P-201ENST00000391224 103 ntBASIC0.56□□□□□ -2.32
RAPGEF4Q8WZA2 MIR3920-201ENST00000581751 86 ntBASIC0.56□□□□□ -2.32
RAPGEF4Q8WZA2 MTRNR2L2-201ENST00000604882 87 ntBASIC0.56□□□□□ -2.32
RAPGEF4Q8WZA2 RNU6-957P-201ENST00000363652 99 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 RNU6-153P-201ENST00000364422 104 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 Y_RNA.283-201ENST00000364798 112 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 MIR1197-201ENST00000408818 88 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 snoU13.11-201ENST00000459219 104 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 RNU7-61P-201ENST00000515897 61 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 RNU7-13P-201ENST00000516413 62 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 SNORA25.18-201ENST00000607153 114 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 AL162376.1-201ENST00000624117 175 ntBASIC0.55□□□□□ -2.32
RAPGEF4Q8WZA2 Y_RNA.495-201ENST00000384435 112 ntBASIC0.54□□□□□ -2.32
RAPGEF4Q8WZA2 SNORD116-10-201ENST00000363791 102 ntBASIC0.53□□□□□ -2.32
RAPGEF4Q8WZA2 Y_RNA.348-201ENST00000365403 103 ntBASIC0.53□□□□□ -2.32
RAPGEF4Q8WZA2 AL161932.1-201ENST00000437408 146 ntBASIC0.53□□□□□ -2.32
RAPGEF4Q8WZA2 SNORA40.13-201ENST00000516379 120 ntBASIC0.53□□□□□ -2.32
RAPGEF4Q8WZA2 SNORA50A-201ENST00000384225 134 ntBASIC0.52□□□□□ -2.33
RAPGEF4Q8WZA2 MIR548L-201ENST00000408303 86 ntBASIC0.52□□□□□ -2.33
RAPGEF4Q8WZA2 Y_RNA.596-201ENST00000410462 109 ntBASIC0.52□□□□□ -2.33
RAPGEF4Q8WZA2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-75P-201ENST00000515944 104 ntBASIC0.52□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-863P-201ENST00000515989 104 ntBASIC0.52□□□□□ -2.33
RAPGEF4Q8WZA2 U6.100-201ENST00000636230 99 ntBASIC0.52□□□□□ -2.33
RAPGEF4Q8WZA2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
RAPGEF4Q8WZA2 RNU2-59P-201ENST00000410482 191 ntBASIC0.51□□□□□ -2.33
RAPGEF4Q8WZA2 RNU7-85P-201ENST00000458851 63 ntBASIC0.51□□□□□ -2.33
RAPGEF4Q8WZA2 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
RAPGEF4Q8WZA2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
RAPGEF4Q8WZA2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
RAPGEF4Q8WZA2 SNORD44.1-201ENST00000363202 61 ntBASIC0.5□□□□□ -2.33
RAPGEF4Q8WZA2 RNU7-74P-201ENST00000459104 62 ntBASIC0.5□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-848P-201ENST00000515948 107 ntBASIC0.5□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-617P-201ENST00000516147 107 ntBASIC0.5□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-473P-201ENST00000516164 107 ntBASIC0.5□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-1049P-201ENST00000516414 107 ntBASIC0.5□□□□□ -2.33
RAPGEF4Q8WZA2 U7.3-201ENST00000616123 62 ntBASIC0.5□□□□□ -2.33
RAPGEF4Q8WZA2 MIRLET7D-201ENST00000362263 87 ntBASIC0.49□□□□□ -2.33
RAPGEF4Q8WZA2 MIR548AG2-201ENST00000581228 64 ntBASIC0.49□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-640P-201ENST00000363693 105 ntBASIC0.48□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-905P-201ENST00000384434 107 ntBASIC0.48□□□□□ -2.33
RAPGEF4Q8WZA2 MIR617-201ENST00000385030 97 ntBASIC0.48□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-269P-201ENST00000391077 97 ntBASIC0.48□□□□□ -2.33
RAPGEF4Q8WZA2 AC069271.1-201ENST00000445577 156 ntBASIC0.48□□□□□ -2.33
RAPGEF4Q8WZA2 SNORD4B-201ENST00000459083 72 ntBASIC0.48□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-168P-201ENST00000516189 101 ntBASIC0.48□□□□□ -2.33
RAPGEF4Q8WZA2 MIR4514-201ENST00000581410 57 ntBASIC0.48□□□□□ -2.33
RAPGEF4Q8WZA2 MIR4696-201ENST00000581431 70 ntBASIC0.48□□□□□ -2.33
RAPGEF4Q8WZA2 MIR4536-1-201ENST00000583537 88 ntBASIC0.48□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-664P-201ENST00000362381 107 ntBASIC0.47□□□□□ -2.33
RAPGEF4Q8WZA2 Y_RNA.290-201ENST00000364879 114 ntBASIC0.47□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-287P-201ENST00000516230 98 ntBASIC0.47□□□□□ -2.33
RAPGEF4Q8WZA2 RNU6-65P-201ENST00000516332 98 ntBASIC0.47□□□□□ -2.33
RAPGEF4Q8WZA2 RNU1-29P-201ENST00000606574 126 ntBASIC0.47□□□□□ -2.33
RAPGEF4Q8WZA2 AC073869.9-201ENST00000641610 120 ntBASIC0.47□□□□□ -2.33
RAPGEF4Q8WZA2 RNA5SP257-201ENST00000363023 116 ntBASIC0.46□□□□□ -2.34
RAPGEF4Q8WZA2 Y_RNA.207-201ENST00000364142 106 ntBASIC0.46□□□□□ -2.34
RAPGEF4Q8WZA2 SNORD101-201ENST00000384027 73 ntBASIC0.46□□□□□ -2.34
RAPGEF4Q8WZA2 Y_RNA.677-201ENST00000516401 85 ntBASIC0.46□□□□□ -2.34
RAPGEF4Q8WZA2 RNU6-509P-201ENST00000363519 107 ntBASIC0.45□□□□□ -2.34
RAPGEF4Q8WZA2 MIR519E-201ENST00000385075 84 ntBASIC0.45□□□□□ -2.34
RAPGEF4Q8WZA2 RNA5SP89-201ENST00000410300 108 ntBASIC0.45□□□□□ -2.34
RAPGEF4Q8WZA2 RNU6-519P-201ENST00000410590 108 ntBASIC0.45□□□□□ -2.34
RAPGEF4Q8WZA2 MIR2113-201ENST00000459007 91 ntBASIC0.45□□□□□ -2.34
RAPGEF4Q8WZA2 RNU6-162P-201ENST00000516228 103 ntBASIC0.45□□□□□ -2.34
RAPGEF4Q8WZA2 AC090625.1-201ENST00000357130 210 ntBASIC0.44□□□□□ -2.34
RAPGEF4Q8WZA2 SNORA62.5-201ENST00000516634 120 ntBASIC0.44□□□□□ -2.34
RAPGEF4Q8WZA2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.44□□□□□ -2.34
RAPGEF4Q8WZA2 MIR2909-201ENST00000617113 69 ntBASIC0.44□□□□□ -2.34
RAPGEF4Q8WZA2 MALAT1.1-201ENST00000618249 95 ntBASIC0.44□□□□□ -2.34
RAPGEF4Q8WZA2 MIR6755-201ENST00000619993 66 ntBASIC0.44□□□□□ -2.34
RAPGEF4Q8WZA2 Y_RNA.190-201ENST00000363964 101 ntBASIC0.43□□□□□ -2.34
RAPGEF4Q8WZA2 AC093423.1-201ENST00000440817 142 ntBASIC0.43□□□□□ -2.34
RAPGEF4Q8WZA2 MIR5706-201ENST00000579841 80 ntBASIC0.43□□□□□ -2.34
RAPGEF4Q8WZA2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.43□□□□□ -2.34
RAPGEF4Q8WZA2 MIR103A1-201ENST00000362165 78 ntBASIC0.42□□□□□ -2.34
RAPGEF4Q8WZA2 RNU6-935P-201ENST00000410371 100 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 225.9 ms