Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MIR4804-201ENST00000581683 73 ntBASIC2.08□□□□□ -2.08
SNIP1Q8TAD8 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
SNIP1Q8TAD8 uc_338.16-201ENST00000621804 95 ntBASIC2.08□□□□□ -2.08
SNIP1Q8TAD8 RNU6-1312P-201ENST00000362425 108 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 RNU6-990P-201ENST00000364385 104 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 RNU7-56P-201ENST00000458744 62 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 MIR4781-201ENST00000585250 76 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 MIR6739-201ENST00000622461 75 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 MIR6766-201ENST00000622641 72 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SNIP1Q8TAD8 snoU13.9-201ENST00000458927 103 ntBASIC2.06□□□□□ -2.08
SNIP1Q8TAD8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
SNIP1Q8TAD8 MIR4713-201ENST00000582691 75 ntBASIC2.06□□□□□ -2.08
SNIP1Q8TAD8 AL157834.3-201ENST00000615543 103 ntBASIC2.06□□□□□ -2.08
SNIP1Q8TAD8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 RNU1-119P-201ENST00000391122 165 ntBASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 RNU4-88P-201ENST00000411220 86 ntBASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 AC025033.1-201ENST00000463883 194 ntBASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 MIR3937-201ENST00000580135 106 ntBASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 snoU13.31-201ENST00000607291 104 ntBASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.04□□□□□ -2.08
SNIP1Q8TAD8 RNU6-1065P-201ENST00000384513 106 ntBASIC2.04□□□□□ -2.08
SNIP1Q8TAD8 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
SNIP1Q8TAD8 MIR630-201ENST00000384957 97 ntBASIC2.04□□□□□ -2.08
SNIP1Q8TAD8 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
SNIP1Q8TAD8 Y_RNA.174-201ENST00000363781 105 ntBASIC2.03□□□□□ -2.08
SNIP1Q8TAD8 Y_RNA.363-201ENST00000365529 113 ntBASIC2.03□□□□□ -2.08
SNIP1Q8TAD8 RNU1-123P-201ENST00000458950 160 ntBASIC2.03□□□□□ -2.08
SNIP1Q8TAD8 MIR548C-201ENST00000384815 97 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 AC108667.1-201ENST00000428618 249 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 RNA5SP182-201ENST00000516064 82 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 AL512310.8-201ENST00000550183 120 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 AC067863.3-201ENST00000624172 122 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SNIP1Q8TAD8 SNORA48.3-201ENST00000391081 134 ntBASIC2.01□□□□□ -2.09
SNIP1Q8TAD8 RNU6-994P-201ENST00000410507 111 ntBASIC2.01□□□□□ -2.09
SNIP1Q8TAD8 AL359821.1-201ENST00000605519 182 ntBASIC2.01□□□□□ -2.09
SNIP1Q8TAD8 SNORD33-201ENST00000362761 85 ntBASIC2□□□□□ -2.09
SNIP1Q8TAD8 AL157398.1-201ENST00000452981 186 ntBASIC2□□□□□ -2.09
SNIP1Q8TAD8 SNORA31.2-201ENST00000516019 134 ntBASIC2□□□□□ -2.09
SNIP1Q8TAD8 MIR6840-201ENST00000611937 71 ntBASIC2□□□□□ -2.09
SNIP1Q8TAD8 MIR21-201ENST00000362134 72 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 MIR100-201ENST00000385259 80 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 MIR934-201ENST00000401241 83 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 MIR548AD-201ENST00000584780 82 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 AL591704.2-201ENST00000421658 181 ntBASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 AC104435.1-201ENST00000483483 166 ntBASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 RNU6-902P-201ENST00000517212 91 ntBASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 AC018659.1-201ENST00000551083 169 ntBASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 MIR378A-201ENST00000362177 66 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 Y_RNA.379-201ENST00000365653 102 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 RNU6-1162P-201ENST00000384443 104 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 MIR520F-201ENST00000384824 87 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 RNU6-321P-201ENST00000410912 106 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 RNU7-21P-201ENST00000459430 62 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 AL136317.1-201ENST00000612653 226 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 MIR1-1-201ENST00000362147 71 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 MT-TY-201ENST00000387409 66 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 RN7SKP88-201ENST00000516847 250 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 7SK.8-201ENST00000612110 250 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 7SK.11-201ENST00000615477 250 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 7SK.13-201ENST00000622040 250 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 MIR521-2-201ENST00000384818 87 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 MIR499A-201ENST00000384903 122 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 MIR30A-201ENST00000385092 71 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 SNORA17.3-201ENST00000391159 129 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 snoU13.13-201ENST00000458842 104 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 RNU7-74P-201ENST00000459104 62 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 RNU6-753P-201ENST00000363926 107 ntBASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 Y_RNA.250-201ENST00000364542 110 ntBASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 Y_RNA.355-201ENST00000365462 98 ntBASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 SNORD113-2-201ENST00000391082 72 ntBASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 MIR4460-201ENST00000577862 86 ntBASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 RNU6-520P-201ENST00000384717 104 ntBASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 MIR517B-201ENST00000385102 67 ntBASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 MIR644A-201ENST00000385262 94 ntBASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 MIR8070-201ENST00000616510 88 ntBASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SNIP1Q8TAD8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms