Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MIR4804-201ENST00000581683 73 ntBASIC2.08□□□□□ -2.08
SNIP1Q8TAD8 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
SNIP1Q8TAD8 uc_338.16-201ENST00000621804 95 ntBASIC2.08□□□□□ -2.08
SNIP1Q8TAD8 RNU6-1312P-201ENST00000362425 108 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 RNU6-990P-201ENST00000364385 104 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 RNU7-56P-201ENST00000458744 62 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 MIR4781-201ENST00000585250 76 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 MIR6739-201ENST00000622461 75 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 MIR6766-201ENST00000622641 72 ntBASIC2.07□□□□□ -2.08
SNIP1Q8TAD8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SNIP1Q8TAD8 snoU13.9-201ENST00000458927 103 ntBASIC2.06□□□□□ -2.08
SNIP1Q8TAD8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
SNIP1Q8TAD8 MIR4713-201ENST00000582691 75 ntBASIC2.06□□□□□ -2.08
SNIP1Q8TAD8 AL157834.3-201ENST00000615543 103 ntBASIC2.06□□□□□ -2.08
SNIP1Q8TAD8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 RNU1-119P-201ENST00000391122 165 ntBASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 RNU4-88P-201ENST00000411220 86 ntBASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 AC025033.1-201ENST00000463883 194 ntBASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 MIR3937-201ENST00000580135 106 ntBASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 snoU13.31-201ENST00000607291 104 ntBASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNIP1Q8TAD8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.04□□□□□ -2.08
SNIP1Q8TAD8 RNU6-1065P-201ENST00000384513 106 ntBASIC2.04□□□□□ -2.08
SNIP1Q8TAD8 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
SNIP1Q8TAD8 MIR630-201ENST00000384957 97 ntBASIC2.04□□□□□ -2.08
SNIP1Q8TAD8 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
SNIP1Q8TAD8 Y_RNA.174-201ENST00000363781 105 ntBASIC2.03□□□□□ -2.08
SNIP1Q8TAD8 Y_RNA.363-201ENST00000365529 113 ntBASIC2.03□□□□□ -2.08
SNIP1Q8TAD8 RNU1-123P-201ENST00000458950 160 ntBASIC2.03□□□□□ -2.08
SNIP1Q8TAD8 MIR548C-201ENST00000384815 97 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 AC108667.1-201ENST00000428618 249 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 RNA5SP182-201ENST00000516064 82 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 AL512310.8-201ENST00000550183 120 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 AC067863.3-201ENST00000624172 122 ntBASIC2.02□□□□□ -2.09
SNIP1Q8TAD8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SNIP1Q8TAD8 SNORA48.3-201ENST00000391081 134 ntBASIC2.01□□□□□ -2.09
SNIP1Q8TAD8 RNU6-994P-201ENST00000410507 111 ntBASIC2.01□□□□□ -2.09
SNIP1Q8TAD8 AL359821.1-201ENST00000605519 182 ntBASIC2.01□□□□□ -2.09
SNIP1Q8TAD8 SNORD33-201ENST00000362761 85 ntBASIC2□□□□□ -2.09
SNIP1Q8TAD8 AL157398.1-201ENST00000452981 186 ntBASIC2□□□□□ -2.09
SNIP1Q8TAD8 SNORA31.2-201ENST00000516019 134 ntBASIC2□□□□□ -2.09
SNIP1Q8TAD8 MIR6840-201ENST00000611937 71 ntBASIC2□□□□□ -2.09
SNIP1Q8TAD8 MIR21-201ENST00000362134 72 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 MIR100-201ENST00000385259 80 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 MIR934-201ENST00000401241 83 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 MIR548AD-201ENST00000584780 82 ntBASIC1.99□□□□□ -2.09
SNIP1Q8TAD8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 AL591704.2-201ENST00000421658 181 ntBASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 AC104435.1-201ENST00000483483 166 ntBASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 RNU6-902P-201ENST00000517212 91 ntBASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 AC018659.1-201ENST00000551083 169 ntBASIC1.98□□□□□ -2.09
SNIP1Q8TAD8 MIR378A-201ENST00000362177 66 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 Y_RNA.379-201ENST00000365653 102 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 RNU6-1162P-201ENST00000384443 104 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 MIR520F-201ENST00000384824 87 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 RNU6-321P-201ENST00000410912 106 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 RNU7-21P-201ENST00000459430 62 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 AL136317.1-201ENST00000612653 226 ntBASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNIP1Q8TAD8 MIR1-1-201ENST00000362147 71 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 MT-TY-201ENST00000387409 66 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 RN7SKP88-201ENST00000516847 250 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 7SK.8-201ENST00000612110 250 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 7SK.11-201ENST00000615477 250 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 7SK.13-201ENST00000622040 250 ntBASIC1.96□□□□□ -2.1
SNIP1Q8TAD8 MIR521-2-201ENST00000384818 87 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 MIR499A-201ENST00000384903 122 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 MIR30A-201ENST00000385092 71 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 SNORA17.3-201ENST00000391159 129 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 snoU13.13-201ENST00000458842 104 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 RNU7-74P-201ENST00000459104 62 ntBASIC1.95□□□□□ -2.1
SNIP1Q8TAD8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 RNU6-753P-201ENST00000363926 107 ntBASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 Y_RNA.250-201ENST00000364542 110 ntBASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 Y_RNA.355-201ENST00000365462 98 ntBASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 SNORD113-2-201ENST00000391082 72 ntBASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 MIR4460-201ENST00000577862 86 ntBASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SNIP1Q8TAD8 RNU6-520P-201ENST00000384717 104 ntBASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 MIR517B-201ENST00000385102 67 ntBASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 MIR644A-201ENST00000385262 94 ntBASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 MIR8070-201ENST00000616510 88 ntBASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
SNIP1Q8TAD8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SNIP1Q8TAD8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 236.2 ms