Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.12□□□□□ -2.23
VRK3Q8IV63 MIR3134-201ENST00000579433 74 ntBASIC1.12□□□□□ -2.23
VRK3Q8IV63 RMST_2.1-201ENST00000617263 136 ntBASIC1.12□□□□□ -2.23
VRK3Q8IV63 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VRK3Q8IV63 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
VRK3Q8IV63 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.11□□□□□ -2.23
VRK3Q8IV63 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
VRK3Q8IV63 Y_RNA.12-201ENST00000362393 112 ntBASIC1.11□□□□□ -2.23
VRK3Q8IV63 RNA5SP403-201ENST00000363598 108 ntBASIC1.11□□□□□ -2.23
VRK3Q8IV63 Y_RNA.174-201ENST00000363781 105 ntBASIC1.11□□□□□ -2.23
VRK3Q8IV63 RNY4P3-201ENST00000365254 95 ntBASIC1.11□□□□□ -2.23
VRK3Q8IV63 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
VRK3Q8IV63 RNU6-935P-201ENST00000410371 100 ntBASIC1.11□□□□□ -2.23
VRK3Q8IV63 Y_RNA.606-201ENST00000410579 103 ntBASIC1.11□□□□□ -2.23
VRK3Q8IV63 SNORA31.14-201ENST00000516728 116 ntBASIC1.11□□□□□ -2.23
VRK3Q8IV63 RNA5SP327-201ENST00000362494 101 ntBASIC1.1□□□□□ -2.23
VRK3Q8IV63 SNORD115-44-201ENST00000365391 82 ntBASIC1.1□□□□□ -2.23
VRK3Q8IV63 MIR520F-201ENST00000384824 87 ntBASIC1.1□□□□□ -2.23
VRK3Q8IV63 MIR19B1-201ENST00000384829 87 ntBASIC1.1□□□□□ -2.23
VRK3Q8IV63 RNU6-807P-201ENST00000516805 107 ntBASIC1.1□□□□□ -2.23
VRK3Q8IV63 MIR3140-201ENST00000583685 90 ntBASIC1.1□□□□□ -2.23
VRK3Q8IV63 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
VRK3Q8IV63 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.1□□□□□ -2.23
VRK3Q8IV63 RNU5F-1-201ENST00000362507 117 ntBASIC1.09□□□□□ -2.23
VRK3Q8IV63 SNORD26-201ENST00000384147 75 ntBASIC1.09□□□□□ -2.23
VRK3Q8IV63 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
VRK3Q8IV63 U3.27-201ENST00000391237 200 ntBASIC1.09□□□□□ -2.23
VRK3Q8IV63 MIR1276-201ENST00000408707 83 ntBASIC1.09□□□□□ -2.23
VRK3Q8IV63 RNU6-1110P-201ENST00000516462 101 ntBASIC1.09□□□□□ -2.23
VRK3Q8IV63 RNU6-340P-201ENST00000364005 107 ntBASIC1.08□□□□□ -2.24
VRK3Q8IV63 RNU6-411P-201ENST00000384451 107 ntBASIC1.08□□□□□ -2.24
VRK3Q8IV63 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
VRK3Q8IV63 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
VRK3Q8IV63 RNU2-59P-201ENST00000410482 191 ntBASIC1.08□□□□□ -2.24
VRK3Q8IV63 AC067940.1-201ENST00000458411 300 ntBASIC1.08□□□□□ -2.24
VRK3Q8IV63 AC002350.1-201ENST00000490759 375 ntBASIC1.08□□□□□ -2.24
VRK3Q8IV63 RNU6-287P-201ENST00000516230 98 ntBASIC1.08□□□□□ -2.24
VRK3Q8IV63 MIR6504-201ENST00000613520 61 ntBASIC1.08□□□□□ -2.24
VRK3Q8IV63 Y_RNA.36-201ENST00000362602 112 ntBASIC1.07□□□□□ -2.24
VRK3Q8IV63 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
VRK3Q8IV63 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
VRK3Q8IV63 U7.7-201ENST00000459276 60 ntBASIC1.07□□□□□ -2.24
VRK3Q8IV63 AC097510.1-201ENST00000510945 133 ntBASIC1.07□□□□□ -2.24
VRK3Q8IV63 RNU6-687P-201ENST00000516443 89 ntBASIC1.07□□□□□ -2.24
VRK3Q8IV63 RNU7-161P-201ENST00000517289 62 ntBASIC1.07□□□□□ -2.24
VRK3Q8IV63 MIR3920-201ENST00000581751 86 ntBASIC1.07□□□□□ -2.24
VRK3Q8IV63 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.07□□□□□ -2.24
VRK3Q8IV63 SNORD115-24-201ENST00000363528 82 ntBASIC1.06□□□□□ -2.24
VRK3Q8IV63 MIR451A-201ENST00000385059 72 ntBASIC1.06□□□□□ -2.24
VRK3Q8IV63 RNA5SP102-201ENST00000516865 106 ntBASIC1.06□□□□□ -2.24
VRK3Q8IV63 MIR548AG2-201ENST00000581228 64 ntBASIC1.06□□□□□ -2.24
VRK3Q8IV63 MIR4484-201ENST00000582855 83 ntBASIC1.06□□□□□ -2.24
VRK3Q8IV63 U6.81-201ENST00000612550 106 ntBASIC1.06□□□□□ -2.24
VRK3Q8IV63 AL136317.1-201ENST00000612653 226 ntBASIC1.06□□□□□ -2.24
VRK3Q8IV63 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.06□□□□□ -2.24
VRK3Q8IV63 RNU6-1126P-201ENST00000384002 107 ntBASIC1.05□□□□□ -2.24
VRK3Q8IV63 RNU7-13P-201ENST00000516413 62 ntBASIC1.05□□□□□ -2.24
VRK3Q8IV63 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
VRK3Q8IV63 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
VRK3Q8IV63 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
VRK3Q8IV63 RNU6-824P-201ENST00000363724 104 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 SNORA25.8-201ENST00000364831 128 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 RNU6-154P-201ENST00000384306 106 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 MIR489-201ENST00000384923 84 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 MIR222-201ENST00000384992 110 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 FABP5P4-201ENST00000437203 171 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 MIR2113-201ENST00000459007 91 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 Y_RNA.681-201ENST00000516445 113 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 RNU6-1015P-201ENST00000517121 99 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 MIR4452-201ENST00000583004 71 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
VRK3Q8IV63 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
VRK3Q8IV63 RNU6-330P-201ENST00000363015 107 ntBASIC1.03□□□□□ -2.24
VRK3Q8IV63 RNU6-681P-201ENST00000364012 104 ntBASIC1.03□□□□□ -2.24
VRK3Q8IV63 MIR617-201ENST00000385030 97 ntBASIC1.03□□□□□ -2.24
VRK3Q8IV63 SNORD105-201ENST00000386910 85 ntBASIC1.03□□□□□ -2.24
VRK3Q8IV63 RNU6-788P-201ENST00000390967 104 ntBASIC1.03□□□□□ -2.24
VRK3Q8IV63 snoU13.18-201ENST00000459483 104 ntBASIC1.03□□□□□ -2.24
VRK3Q8IV63 AC114801.3-201ENST00000510231 177 ntBASIC1.03□□□□□ -2.24
VRK3Q8IV63 RNU6-70P-201ENST00000516438 60 ntBASIC1.03□□□□□ -2.24
VRK3Q8IV63 RNU6-135P-201ENST00000516769 101 ntBASIC1.03□□□□□ -2.24
VRK3Q8IV63 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
VRK3Q8IV63 Y_RNA.371-201ENST00000365591 113 ntBASIC1.02□□□□□ -2.25
VRK3Q8IV63 MIR200A-201ENST00000384875 90 ntBASIC1.02□□□□□ -2.25
VRK3Q8IV63 SNORD89-201ENST00000390981 114 ntBASIC1.02□□□□□ -2.25
VRK3Q8IV63 RNU6-1052P-201ENST00000411398 104 ntBASIC1.02□□□□□ -2.25
VRK3Q8IV63 RNU6-719P-201ENST00000516671 104 ntBASIC1.02□□□□□ -2.25
VRK3Q8IV63 AL078603.1-201ENST00000603824 313 ntBASIC1.02□□□□□ -2.25
VRK3Q8IV63 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
VRK3Q8IV63 MIR664A-201ENST00000626086 82 ntBASIC1.02□□□□□ -2.25
VRK3Q8IV63 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
VRK3Q8IV63 RNU1-124P-201ENST00000363861 145 ntBASIC1.01□□□□□ -2.25
VRK3Q8IV63 RNA5SP117-201ENST00000365294 118 ntBASIC1.01□□□□□ -2.25
VRK3Q8IV63 SNORD28-201ENST00000384706 75 ntBASIC1.01□□□□□ -2.25
VRK3Q8IV63 MIR618-201ENST00000385287 98 ntBASIC1.01□□□□□ -2.25
VRK3Q8IV63 MIR216B-201ENST00000390186 82 ntBASIC1.01□□□□□ -2.25
VRK3Q8IV63 SNORD41.1-201ENST00000391000 69 ntBASIC1.01□□□□□ -2.25
VRK3Q8IV63 RNU6-1177P-201ENST00000391058 104 ntBASIC1.01□□□□□ -2.25
VRK3Q8IV63 RNU6-587P-201ENST00000391282 106 ntBASIC1.01□□□□□ -2.25
VRK3Q8IV63 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 273.1 ms