Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RETREG3Q86VR2 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
RETREG3Q86VR2 MIR203A-201ENST00000384836 110 ntBASIC1.86□□□□□ -2.11
RETREG3Q86VR2 AC002429.1-201ENST00000437672 148 ntBASIC1.86□□□□□ -2.11
RETREG3Q86VR2 RNU6-135P-201ENST00000516769 101 ntBASIC1.86□□□□□ -2.11
RETREG3Q86VR2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RETREG3Q86VR2 RNU6-54P-201ENST00000365563 107 ntBASIC1.85□□□□□ -2.11
RETREG3Q86VR2 MTND4LP1-201ENST00000446263 157 ntBASIC1.85□□□□□ -2.11
RETREG3Q86VR2 RNU7-74P-201ENST00000459104 62 ntBASIC1.85□□□□□ -2.11
RETREG3Q86VR2 SNORA64-201ENST00000384674 134 ntBASIC1.84□□□□□ -2.11
RETREG3Q86VR2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.84□□□□□ -2.11
RETREG3Q86VR2 MIR548L-201ENST00000408303 86 ntBASIC1.84□□□□□ -2.11
RETREG3Q86VR2 snoU13.15-201ENST00000459407 104 ntBASIC1.84□□□□□ -2.11
RETREG3Q86VR2 AC069503.3-201ENST00000618674 145 ntBASIC1.84□□□□□ -2.11
RETREG3Q86VR2 AL109933.3-201ENST00000619095 188 ntBASIC1.84□□□□□ -2.11
RETREG3Q86VR2 MIR219B-201ENST00000637023 88 ntBASIC1.84□□□□□ -2.11
RETREG3Q86VR2 MIR504-201ENST00000385065 83 ntBASIC1.83□□□□□ -2.12
RETREG3Q86VR2 SNORD89-201ENST00000390981 114 ntBASIC1.83□□□□□ -2.12
RETREG3Q86VR2 MTND4LP19-201ENST00000403051 166 ntBASIC1.83□□□□□ -2.12
RETREG3Q86VR2 MIR4639-201ENST00000584938 69 ntBASIC1.83□□□□□ -2.12
RETREG3Q86VR2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.83□□□□□ -2.12
RETREG3Q86VR2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RETREG3Q86VR2 SNORA7.1-201ENST00000363750 139 ntBASIC1.82□□□□□ -2.12
RETREG3Q86VR2 RNU6-668P-201ENST00000364180 107 ntBASIC1.82□□□□□ -2.12
RETREG3Q86VR2 RNU6V-201ENST00000384105 107 ntBASIC1.82□□□□□ -2.12
RETREG3Q86VR2 SNORA40.6-201ENST00000391153 128 ntBASIC1.82□□□□□ -2.12
RETREG3Q86VR2 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
RETREG3Q86VR2 AC244669.1-204ENST00000621564 178 ntBASIC1.82□□□□□ -2.12
RETREG3Q86VR2 RNU6-1187P-201ENST00000364771 110 ntBASIC1.81□□□□□ -2.12
RETREG3Q86VR2 SNORA25-201ENST00000384384 134 ntBASIC1.81□□□□□ -2.12
RETREG3Q86VR2 MIR3124-201ENST00000582636 67 ntBASIC1.81□□□□□ -2.12
RETREG3Q86VR2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
RETREG3Q86VR2 AC073869.9-201ENST00000641610 120 ntBASIC1.81□□□□□ -2.12
RETREG3Q86VR2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RETREG3Q86VR2 SNORD114-1-201ENST00000362705 72 ntBASIC1.8□□□□□ -2.12
RETREG3Q86VR2 SNORD28-201ENST00000384706 75 ntBASIC1.8□□□□□ -2.12
RETREG3Q86VR2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.8□□□□□ -2.12
RETREG3Q86VR2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
RETREG3Q86VR2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RETREG3Q86VR2 RNU6-499P-201ENST00000365615 107 ntBASIC1.79□□□□□ -2.12
RETREG3Q86VR2 SNORD105-201ENST00000386910 85 ntBASIC1.79□□□□□ -2.12
RETREG3Q86VR2 MIR3657-201ENST00000584818 117 ntBASIC1.79□□□□□ -2.12
RETREG3Q86VR2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.79□□□□□ -2.12
RETREG3Q86VR2 MIR7843-201ENST00000622274 79 ntBASIC1.79□□□□□ -2.12
RETREG3Q86VR2 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
RETREG3Q86VR2 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
RETREG3Q86VR2 FABP5P4-201ENST00000437203 171 ntBASIC1.78□□□□□ -2.12
RETREG3Q86VR2 MIR4285-201ENST00000581001 85 ntBASIC1.78□□□□□ -2.12
RETREG3Q86VR2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.78□□□□□ -2.12
RETREG3Q86VR2 RNA5SP327-201ENST00000362494 101 ntBASIC1.77□□□□□ -2.13
RETREG3Q86VR2 RNU6-260P-201ENST00000384092 107 ntBASIC1.77□□□□□ -2.13
RETREG3Q86VR2 SNORD41.1-201ENST00000391000 69 ntBASIC1.77□□□□□ -2.13
RETREG3Q86VR2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RETREG3Q86VR2 SNORD42B-201ENST00000458893 67 ntBASIC1.77□□□□□ -2.13
RETREG3Q86VR2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RETREG3Q86VR2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.76□□□□□ -2.13
RETREG3Q86VR2 AC110620.1-201ENST00000416042 228 ntBASIC1.76□□□□□ -2.13
RETREG3Q86VR2 MIR4460-201ENST00000577862 86 ntBASIC1.76□□□□□ -2.13
RETREG3Q86VR2 MIR7-2-201ENST00000384970 110 ntBASIC1.75□□□□□ -2.13
RETREG3Q86VR2 U7.7-201ENST00000459276 60 ntBASIC1.75□□□□□ -2.13
RETREG3Q86VR2 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
RETREG3Q86VR2 RNU6-645P-201ENST00000364649 106 ntBASIC1.74□□□□□ -2.13
RETREG3Q86VR2 RNU6-716P-201ENST00000365621 103 ntBASIC1.74□□□□□ -2.13
RETREG3Q86VR2 MT-TY-201ENST00000387409 66 ntBASIC1.74□□□□□ -2.13
RETREG3Q86VR2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RETREG3Q86VR2 SNORD18A-201ENST00000363753 72 ntBASIC1.73□□□□□ -2.13
RETREG3Q86VR2 RNU6-987P-201ENST00000384759 104 ntBASIC1.73□□□□□ -2.13
RETREG3Q86VR2 MIR4524B-201ENST00000581569 115 ntBASIC1.73□□□□□ -2.13
RETREG3Q86VR2 RNU6-726P-201ENST00000364680 107 ntBASIC1.72□□□□□ -2.13
RETREG3Q86VR2 RNU6-669P-201ENST00000365575 107 ntBASIC1.72□□□□□ -2.13
RETREG3Q86VR2 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
RETREG3Q86VR2 SNORA2.1-201ENST00000363089 137 ntBASIC1.71□□□□□ -2.14
RETREG3Q86VR2 snoU13.23-201ENST00000458863 104 ntBASIC1.71□□□□□ -2.14
RETREG3Q86VR2 RNU6-237P-201ENST00000515985 71 ntBASIC1.71□□□□□ -2.14
RETREG3Q86VR2 RNA5SP182-201ENST00000516064 82 ntBASIC1.71□□□□□ -2.14
RETREG3Q86VR2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.71□□□□□ -2.14
RETREG3Q86VR2 RNU6-542P-201ENST00000516405 103 ntBASIC1.71□□□□□ -2.14
RETREG3Q86VR2 RNA5SP147-201ENST00000516493 109 ntBASIC1.71□□□□□ -2.14
RETREG3Q86VR2 RNA5SP47-201ENST00000517230 109 ntBASIC1.71□□□□□ -2.14
RETREG3Q86VR2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.71□□□□□ -2.14
RETREG3Q86VR2 Y_RNA.375-201ENST00000365625 101 ntBASIC1.7□□□□□ -2.14
RETREG3Q86VR2 RNU4-37P-201ENST00000410214 84 ntBASIC1.7□□□□□ -2.14
RETREG3Q86VR2 RNU1-92P-201ENST00000517017 135 ntBASIC1.7□□□□□ -2.14
RETREG3Q86VR2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.7□□□□□ -2.14
RETREG3Q86VR2 MIR3678-201ENST00000578455 94 ntBASIC1.7□□□□□ -2.14
RETREG3Q86VR2 RNU6-990P-201ENST00000364385 104 ntBASIC1.69□□□□□ -2.14
RETREG3Q86VR2 MIR1289-2-201ENST00000408360 111 ntBASIC1.69□□□□□ -2.14
RETREG3Q86VR2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.68□□□□□ -2.14
RETREG3Q86VR2 RNU1-141P-201ENST00000364623 158 ntBASIC1.68□□□□□ -2.14
RETREG3Q86VR2 MIR583-201ENST00000384846 75 ntBASIC1.68□□□□□ -2.14
RETREG3Q86VR2 MIR573-201ENST00000384964 99 ntBASIC1.68□□□□□ -2.14
RETREG3Q86VR2 MIR9-3-201ENST00000385084 90 ntBASIC1.68□□□□□ -2.14
RETREG3Q86VR2 AC108210.2-201ENST00000503681 201 ntBASIC1.68□□□□□ -2.14
RETREG3Q86VR2 MIR3612-201ENST00000579753 87 ntBASIC1.68□□□□□ -2.14
RETREG3Q86VR2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RETREG3Q86VR2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RETREG3Q86VR2 AL591806.2-201ENST00000433122 173 ntBASIC1.67□□□□□ -2.14
RETREG3Q86VR2 RNU6-548P-201ENST00000517083 115 ntBASIC1.67□□□□□ -2.14
RETREG3Q86VR2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RETREG3Q86VR2 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms