Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 SNORD90-201ENST00000391145 111 ntBASIC1.38□□□□□ -2.19
USP48Q86UV5 SNORA18.5-201ENST00000516616 101 ntBASIC1.38□□□□□ -2.19
USP48Q86UV5 AC025627.3-201ENST00000582078 182 ntBASIC1.38□□□□□ -2.19
USP48Q86UV5 MIRLET7F1-201ENST00000362202 87 ntBASIC1.37□□□□□ -2.19
USP48Q86UV5 RNU6-811P-201ENST00000384069 107 ntBASIC1.37□□□□□ -2.19
USP48Q86UV5 MIR520H-201ENST00000385126 88 ntBASIC1.37□□□□□ -2.19
USP48Q86UV5 AL450471.1-201ENST00000447509 127 ntBASIC1.37□□□□□ -2.19
USP48Q86UV5 RNU6-65P-201ENST00000516332 98 ntBASIC1.37□□□□□ -2.19
USP48Q86UV5 MIR5000-201ENST00000577717 103 ntBASIC1.37□□□□□ -2.19
USP48Q86UV5 RNU7-10P-201ENST00000607194 63 ntBASIC1.37□□□□□ -2.19
USP48Q86UV5 RNU6-535P-201ENST00000384722 107 ntBASIC1.36□□□□□ -2.19
USP48Q86UV5 RNA5SP255-201ENST00000516370 107 ntBASIC1.36□□□□□ -2.19
USP48Q86UV5 AC104996.3-201ENST00000590718 94 ntBASIC1.36□□□□□ -2.19
USP48Q86UV5 TRDV1-202ENST00000621643 102 ntBASIC1.36□□□□□ -2.19
USP48Q86UV5 SNORD115-37-201ENST00000363768 82 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 RNU6-466P-201ENST00000391224 103 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 MIR1285-1-201ENST00000408593 84 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 AC097635.1-201ENST00000450678 155 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 AC138907.6-201ENST00000568401 126 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 AC138869.1-201ENST00000568623 124 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 MIR4796-201ENST00000580742 81 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 RN7SL793P-201ENST00000583259 296 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 MIR4712-201ENST00000583750 82 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 MTRNR2L2-201ENST00000604882 87 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 uc_338.16-201ENST00000621804 95 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 U6.100-201ENST00000636230 99 ntBASIC1.35□□□□□ -2.19
USP48Q86UV5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
USP48Q86UV5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
USP48Q86UV5 MIR373-201ENST00000362273 69 ntBASIC1.34□□□□□ -2.19
USP48Q86UV5 RNU6-776P-201ENST00000364403 104 ntBASIC1.34□□□□□ -2.19
USP48Q86UV5 RNU6-1022P-201ENST00000365049 104 ntBASIC1.34□□□□□ -2.19
USP48Q86UV5 MIR599-201ENST00000385069 95 ntBASIC1.34□□□□□ -2.19
USP48Q86UV5 AC244505.6-201ENST00000452829 130 ntBASIC1.34□□□□□ -2.19
USP48Q86UV5 Y_RNA.32-201ENST00000362589 110 ntBASIC1.33□□□□□ -2.2
USP48Q86UV5 RNU6-1265P-201ENST00000516342 103 ntBASIC1.33□□□□□ -2.2
USP48Q86UV5 SNORA31.14-201ENST00000516728 116 ntBASIC1.33□□□□□ -2.2
USP48Q86UV5 MIR4661-201ENST00000582720 75 ntBASIC1.33□□□□□ -2.2
USP48Q86UV5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
USP48Q86UV5 Y_RNA.491-201ENST00000384417 107 ntBASIC1.32□□□□□ -2.2
USP48Q86UV5 MIR4696-201ENST00000581431 70 ntBASIC1.32□□□□□ -2.2
USP48Q86UV5 MIR4662A-201ENST00000637499 67 ntBASIC1.32□□□□□ -2.2
USP48Q86UV5 SNORA63.2-201ENST00000362603 126 ntBASIC1.31□□□□□ -2.2
USP48Q86UV5 RNU6-664P-201ENST00000362381 107 ntBASIC1.3□□□□□ -2.2
USP48Q86UV5 Y_RNA.30-201ENST00000362572 97 ntBASIC1.3□□□□□ -2.2
USP48Q86UV5 RNU6-1335P-201ENST00000365426 107 ntBASIC1.3□□□□□ -2.2
USP48Q86UV5 MIR216A-201ENST00000385063 110 ntBASIC1.3□□□□□ -2.2
USP48Q86UV5 RNU6-129P-201ENST00000391022 107 ntBASIC1.3□□□□□ -2.2
USP48Q86UV5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
USP48Q86UV5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.3□□□□□ -2.2
USP48Q86UV5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
USP48Q86UV5 RNU6-161P-201ENST00000363051 106 ntBASIC1.29□□□□□ -2.2
USP48Q86UV5 RNU6-1296P-201ENST00000383879 107 ntBASIC1.29□□□□□ -2.2
USP48Q86UV5 RNU6-1108P-201ENST00000516308 104 ntBASIC1.29□□□□□ -2.2
USP48Q86UV5 RNU6-557P-201ENST00000516842 110 ntBASIC1.29□□□□□ -2.2
USP48Q86UV5 AC211469.2-201ENST00000605461 205 ntBASIC1.29□□□□□ -2.2
USP48Q86UV5 Y_RNA.788-201ENST00000622394 112 ntBASIC1.29□□□□□ -2.2
USP48Q86UV5 RNU6-1229P-201ENST00000364295 107 ntBASIC1.28□□□□□ -2.2
USP48Q86UV5 snoU13.17-201ENST00000458802 104 ntBASIC1.28□□□□□ -2.2
USP48Q86UV5 RNU6-315P-201ENST00000362666 107 ntBASIC1.27□□□□□ -2.21
USP48Q86UV5 Y_RNA.174-201ENST00000363781 105 ntBASIC1.27□□□□□ -2.21
USP48Q86UV5 Y_RNA.565-201ENST00000384719 101 ntBASIC1.27□□□□□ -2.21
USP48Q86UV5 MIR548U-201ENST00000390728 81 ntBASIC1.27□□□□□ -2.21
USP48Q86UV5 AC002350.1-201ENST00000490759 375 ntBASIC1.27□□□□□ -2.21
USP48Q86UV5 CYP3A137P-201ENST00000562436 69 ntBASIC1.27□□□□□ -2.21
USP48Q86UV5 MIR3973-201ENST00000579824 107 ntBASIC1.27□□□□□ -2.21
USP48Q86UV5 MIRLET7A1-201ENST00000362295 80 ntBASIC1.26□□□□□ -2.21
USP48Q86UV5 RNA5SP403-201ENST00000363598 108 ntBASIC1.26□□□□□ -2.21
USP48Q86UV5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
USP48Q86UV5 SNORD101-201ENST00000384027 73 ntBASIC1.26□□□□□ -2.21
USP48Q86UV5 MIR573-201ENST00000384964 99 ntBASIC1.26□□□□□ -2.21
USP48Q86UV5 RNU7-161P-201ENST00000517289 62 ntBASIC1.26□□□□□ -2.21
USP48Q86UV5 SNORD114-21-201ENST00000606412 72 ntBASIC1.26□□□□□ -2.21
USP48Q86UV5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
USP48Q86UV5 RNA5SP117-201ENST00000365294 118 ntBASIC1.25□□□□□ -2.21
USP48Q86UV5 SNORD99-201ENST00000408612 74 ntBASIC1.25□□□□□ -2.21
USP48Q86UV5 Y_RNA.596-201ENST00000410462 109 ntBASIC1.25□□□□□ -2.21
USP48Q86UV5 MIR3140-201ENST00000583685 90 ntBASIC1.25□□□□□ -2.21
USP48Q86UV5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.25□□□□□ -2.21
USP48Q86UV5 Y_RNA.207-201ENST00000364142 106 ntBASIC1.24□□□□□ -2.21
USP48Q86UV5 RNU6-1051P-201ENST00000365471 102 ntBASIC1.24□□□□□ -2.21
USP48Q86UV5 Y_RNA.532-201ENST00000384590 113 ntBASIC1.24□□□□□ -2.21
USP48Q86UV5 MIR644A-201ENST00000385262 94 ntBASIC1.24□□□□□ -2.21
USP48Q86UV5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
USP48Q86UV5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.24□□□□□ -2.21
USP48Q86UV5 SCARNA18B-201ENST00000458806 135 ntBASIC1.24□□□□□ -2.21
USP48Q86UV5 MIR4484-201ENST00000582855 83 ntBASIC1.24□□□□□ -2.21
USP48Q86UV5 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
USP48Q86UV5 MIR548AG2-201ENST00000581228 64 ntBASIC1.23□□□□□ -2.21
USP48Q86UV5 AC145423.2-201ENST00000610631 239 ntBASIC1.23□□□□□ -2.21
USP48Q86UV5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.22□□□□□ -2.21
USP48Q86UV5 SNORD115-24-201ENST00000363528 82 ntBASIC1.22□□□□□ -2.21
USP48Q86UV5 Y_RNA.239-201ENST00000364444 113 ntBASIC1.22□□□□□ -2.21
USP48Q86UV5 RNU6-686P-201ENST00000364839 107 ntBASIC1.22□□□□□ -2.21
USP48Q86UV5 FGF7P7-201ENST00000514120 227 ntBASIC1.22□□□□□ -2.21
USP48Q86UV5 RNU6-287P-201ENST00000516230 98 ntBASIC1.22□□□□□ -2.21
USP48Q86UV5 U7.4-201ENST00000614961 63 ntBASIC1.22□□□□□ -2.21
USP48Q86UV5 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.22□□□□□ -2.21
USP48Q86UV5 SNORA24B-201ENST00000384176 131 ntBASIC1.21□□□□□ -2.22
USP48Q86UV5 RNU6-1052P-201ENST00000411398 104 ntBASIC1.21□□□□□ -2.22
USP48Q86UV5 RNU6-719P-201ENST00000516671 104 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms