Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.12□□□□□ -2.07
SH3RF1Q7Z6J0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.12□□□□□ -2.07
SH3RF1Q7Z6J0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SH3RF1Q7Z6J0 MIR938-201ENST00000401216 83 ntBASIC2.11□□□□□ -2.07
SH3RF1Q7Z6J0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.11□□□□□ -2.07
SH3RF1Q7Z6J0 MIR4676-201ENST00000583078 72 ntBASIC2.11□□□□□ -2.07
SH3RF1Q7Z6J0 AL645939.4-201ENST00000604495 135 ntBASIC2.11□□□□□ -2.07
SH3RF1Q7Z6J0 AC106800.4-201ENST00000614905 153 ntBASIC2.11□□□□□ -2.07
SH3RF1Q7Z6J0 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
SH3RF1Q7Z6J0 RNU6-940P-201ENST00000363433 104 ntBASIC2.1□□□□□ -2.07
SH3RF1Q7Z6J0 RNA5SP192-201ENST00000364404 120 ntBASIC2.1□□□□□ -2.07
SH3RF1Q7Z6J0 AL591704.2-201ENST00000421658 181 ntBASIC2.1□□□□□ -2.07
SH3RF1Q7Z6J0 SNORA31.2-201ENST00000516019 134 ntBASIC2.1□□□□□ -2.07
SH3RF1Q7Z6J0 Y_RNA.722-201ENST00000517279 114 ntBASIC2.1□□□□□ -2.07
SH3RF1Q7Z6J0 MIR3198-2-201ENST00000577868 80 ntBASIC2.1□□□□□ -2.07
SH3RF1Q7Z6J0 AC027335.2-201ENST00000624030 375 ntBASIC2.1□□□□□ -2.07
SH3RF1Q7Z6J0 MIR7978-201ENST00000636158 59 ntBASIC2.1□□□□□ -2.07
SH3RF1Q7Z6J0 AC073869.9-201ENST00000641610 120 ntBASIC2.1□□□□□ -2.07
SH3RF1Q7Z6J0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SH3RF1Q7Z6J0 RNA5SP245-201ENST00000364239 121 ntBASIC2.09□□□□□ -2.07
SH3RF1Q7Z6J0 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
SH3RF1Q7Z6J0 SNORA75.2-201ENST00000391138 150 ntBASIC2.09□□□□□ -2.07
SH3RF1Q7Z6J0 SNORA75.3-201ENST00000391231 150 ntBASIC2.09□□□□□ -2.07
SH3RF1Q7Z6J0 RNU6-994P-201ENST00000410507 111 ntBASIC2.09□□□□□ -2.07
SH3RF1Q7Z6J0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.09□□□□□ -2.07
SH3RF1Q7Z6J0 AC023827.1-201ENST00000569247 97 ntBASIC2.09□□□□□ -2.07
SH3RF1Q7Z6J0 RNU6-495P-201ENST00000362995 107 ntBASIC2.08□□□□□ -2.08
SH3RF1Q7Z6J0 SNORD115-44-201ENST00000365391 82 ntBASIC2.08□□□□□ -2.08
SH3RF1Q7Z6J0 RNU6-1039P-201ENST00000383931 107 ntBASIC2.08□□□□□ -2.08
SH3RF1Q7Z6J0 AC244505.6-201ENST00000452829 130 ntBASIC2.08□□□□□ -2.08
SH3RF1Q7Z6J0 RNU7-40P-201ENST00000516397 64 ntBASIC2.08□□□□□ -2.08
SH3RF1Q7Z6J0 AC008608.1-201ENST00000603910 127 ntBASIC2.08□□□□□ -2.08
SH3RF1Q7Z6J0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
SH3RF1Q7Z6J0 SNORD48-201ENST00000364953 64 ntBASIC2.07□□□□□ -2.08
SH3RF1Q7Z6J0 RNU6-808P-201ENST00000391233 108 ntBASIC2.07□□□□□ -2.08
SH3RF1Q7Z6J0 SCARNA21.1-201ENST00000515996 128 ntBASIC2.07□□□□□ -2.08
SH3RF1Q7Z6J0 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
SH3RF1Q7Z6J0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SH3RF1Q7Z6J0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
SH3RF1Q7Z6J0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SH3RF1Q7Z6J0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SH3RF1Q7Z6J0 RNU6-369P-201ENST00000362515 102 ntBASIC2.06□□□□□ -2.08
SH3RF1Q7Z6J0 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
SH3RF1Q7Z6J0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.06□□□□□ -2.08
SH3RF1Q7Z6J0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.06□□□□□ -2.08
SH3RF1Q7Z6J0 BX248123.2-201ENST00000606318 124 ntBASIC2.06□□□□□ -2.08
SH3RF1Q7Z6J0 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
SH3RF1Q7Z6J0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
SH3RF1Q7Z6J0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SH3RF1Q7Z6J0 RNU7-102P-201ENST00000458948 62 ntBASIC2.05□□□□□ -2.08
SH3RF1Q7Z6J0 MIR4422-201ENST00000581938 83 ntBASIC2.05□□□□□ -2.08
SH3RF1Q7Z6J0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SH3RF1Q7Z6J0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SH3RF1Q7Z6J0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SH3RF1Q7Z6J0 RNU1-119P-201ENST00000391122 165 ntBASIC2.04□□□□□ -2.08
SH3RF1Q7Z6J0 AC008834.1-201ENST00000511612 175 ntBASIC2.04□□□□□ -2.08
SH3RF1Q7Z6J0 MIR6509-201ENST00000614603 85 ntBASIC2.04□□□□□ -2.08
SH3RF1Q7Z6J0 SNORD113-4-201ENST00000364802 75 ntBASIC2.03□□□□□ -2.08
SH3RF1Q7Z6J0 RNU6-1335P-201ENST00000365426 107 ntBASIC2.03□□□□□ -2.08
SH3RF1Q7Z6J0 SNORA80D-201ENST00000384488 135 ntBASIC2.03□□□□□ -2.08
SH3RF1Q7Z6J0 RNU7-95P-201ENST00000459222 64 ntBASIC2.03□□□□□ -2.08
SH3RF1Q7Z6J0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SH3RF1Q7Z6J0 MIR100-201ENST00000385259 80 ntBASIC2.02□□□□□ -2.09
SH3RF1Q7Z6J0 MIR216B-201ENST00000390186 82 ntBASIC2.02□□□□□ -2.09
SH3RF1Q7Z6J0 RNU1-78P-201ENST00000391248 165 ntBASIC2.02□□□□□ -2.09
SH3RF1Q7Z6J0 RNU7-90P-201ENST00000459216 62 ntBASIC2.02□□□□□ -2.09
SH3RF1Q7Z6J0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.02□□□□□ -2.09
SH3RF1Q7Z6J0 NAMPTP3-201ENST00000569273 224 ntBASIC2.02□□□□□ -2.09
SH3RF1Q7Z6J0 MIR4419B-201ENST00000577260 68 ntBASIC2.02□□□□□ -2.09
SH3RF1Q7Z6J0 MIR548AG2-201ENST00000581228 64 ntBASIC2.02□□□□□ -2.09
SH3RF1Q7Z6J0 RNU6-645P-201ENST00000364649 106 ntBASIC2.01□□□□□ -2.09
SH3RF1Q7Z6J0 RNU6-936P-201ENST00000384005 107 ntBASIC2.01□□□□□ -2.09
SH3RF1Q7Z6J0 RNU6-1184P-201ENST00000384588 108 ntBASIC2.01□□□□□ -2.09
SH3RF1Q7Z6J0 MIR934-201ENST00000401241 83 ntBASIC2.01□□□□□ -2.09
SH3RF1Q7Z6J0 RNU7-21P-201ENST00000459430 62 ntBASIC2.01□□□□□ -2.09
SH3RF1Q7Z6J0 RNU7-13P-201ENST00000516413 62 ntBASIC2.01□□□□□ -2.09
SH3RF1Q7Z6J0 RNU6-122P-201ENST00000516818 107 ntBASIC2.01□□□□□ -2.09
SH3RF1Q7Z6J0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SH3RF1Q7Z6J0 MIR1-1-201ENST00000362147 71 ntBASIC2□□□□□ -2.09
SH3RF1Q7Z6J0 Y_RNA.224-201ENST00000364308 111 ntBASIC2□□□□□ -2.09
SH3RF1Q7Z6J0 RNU6-1126P-201ENST00000384002 107 ntBASIC2□□□□□ -2.09
SH3RF1Q7Z6J0 AC067940.1-201ENST00000458411 300 ntBASIC2□□□□□ -2.09
SH3RF1Q7Z6J0 MIR4804-201ENST00000581683 73 ntBASIC2□□□□□ -2.09
SH3RF1Q7Z6J0 MIR3938-201ENST00000582157 103 ntBASIC2□□□□□ -2.09
SH3RF1Q7Z6J0 MIR3657-201ENST00000584818 117 ntBASIC2□□□□□ -2.09
SH3RF1Q7Z6J0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SH3RF1Q7Z6J0 Y_RNA.174-201ENST00000363781 105 ntBASIC1.99□□□□□ -2.09
SH3RF1Q7Z6J0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.99□□□□□ -2.09
SH3RF1Q7Z6J0 MIR203A-201ENST00000384836 110 ntBASIC1.99□□□□□ -2.09
SH3RF1Q7Z6J0 SNORA67.5-201ENST00000391036 107 ntBASIC1.99□□□□□ -2.09
SH3RF1Q7Z6J0 RNA5SP299-201ENST00000391203 116 ntBASIC1.99□□□□□ -2.09
SH3RF1Q7Z6J0 snoU13.18-201ENST00000459483 104 ntBASIC1.99□□□□□ -2.09
SH3RF1Q7Z6J0 AL157834.3-201ENST00000615543 103 ntBASIC1.99□□□□□ -2.09
SH3RF1Q7Z6J0 MIR548O2-201ENST00000616090 70 ntBASIC1.99□□□□□ -2.09
SH3RF1Q7Z6J0 RNA5SP215-201ENST00000363440 122 ntBASIC1.98□□□□□ -2.09
SH3RF1Q7Z6J0 RNA5SP117-201ENST00000365294 118 ntBASIC1.98□□□□□ -2.09
SH3RF1Q7Z6J0 RNU6-910P-201ENST00000390844 107 ntBASIC1.98□□□□□ -2.09
SH3RF1Q7Z6J0 RNA5SP403-201ENST00000363598 108 ntBASIC1.97□□□□□ -2.09
SH3RF1Q7Z6J0 MIR1276-201ENST00000408707 83 ntBASIC1.97□□□□□ -2.09
SH3RF1Q7Z6J0 MIR520F-201ENST00000384824 87 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 257.9 ms