Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AC097510.1-201ENST00000510945 133 ntBASIC1.33□□□□□ -2.2
LIMS2Q7Z4I7 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.33□□□□□ -2.2
LIMS2Q7Z4I7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LIMS2Q7Z4I7 RNU6-364P-201ENST00000384387 107 ntBASIC1.32□□□□□ -2.2
LIMS2Q7Z4I7 RNU6-1241P-201ENST00000384536 107 ntBASIC1.32□□□□□ -2.2
LIMS2Q7Z4I7 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
LIMS2Q7Z4I7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.32□□□□□ -2.2
LIMS2Q7Z4I7 MIR2113-201ENST00000459007 91 ntBASIC1.32□□□□□ -2.2
LIMS2Q7Z4I7 U6.81-201ENST00000612550 106 ntBASIC1.32□□□□□ -2.2
LIMS2Q7Z4I7 RNU6-824P-201ENST00000363724 104 ntBASIC1.31□□□□□ -2.2
LIMS2Q7Z4I7 Y_RNA.371-201ENST00000365591 113 ntBASIC1.31□□□□□ -2.2
LIMS2Q7Z4I7 RNU6-910P-201ENST00000390844 107 ntBASIC1.31□□□□□ -2.2
LIMS2Q7Z4I7 RNA5SP247-201ENST00000411181 105 ntBASIC1.31□□□□□ -2.2
LIMS2Q7Z4I7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.31□□□□□ -2.2
LIMS2Q7Z4I7 RNU7-90P-201ENST00000459216 62 ntBASIC1.31□□□□□ -2.2
LIMS2Q7Z4I7 TRMT112P2-201ENST00000512910 132 ntBASIC1.31□□□□□ -2.2
LIMS2Q7Z4I7 SNORA8.1-201ENST00000384250 140 ntBASIC1.3□□□□□ -2.2
LIMS2Q7Z4I7 U3.27-201ENST00000391237 200 ntBASIC1.3□□□□□ -2.2
LIMS2Q7Z4I7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.3□□□□□ -2.2
LIMS2Q7Z4I7 RNU6-287P-201ENST00000516230 98 ntBASIC1.3□□□□□ -2.2
LIMS2Q7Z4I7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
LIMS2Q7Z4I7 AL157834.3-201ENST00000615543 103 ntBASIC1.3□□□□□ -2.2
LIMS2Q7Z4I7 uc_338.16-201ENST00000621804 95 ntBASIC1.3□□□□□ -2.2
LIMS2Q7Z4I7 RNU6-681P-201ENST00000364012 104 ntBASIC1.29□□□□□ -2.2
LIMS2Q7Z4I7 SNORD115-31-201ENST00000365318 82 ntBASIC1.29□□□□□ -2.2
LIMS2Q7Z4I7 SNORD115-44-201ENST00000365391 82 ntBASIC1.29□□□□□ -2.2
LIMS2Q7Z4I7 MIR451A-201ENST00000385059 72 ntBASIC1.29□□□□□ -2.2
LIMS2Q7Z4I7 MIR1265-201ENST00000408444 86 ntBASIC1.29□□□□□ -2.2
LIMS2Q7Z4I7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LIMS2Q7Z4I7 RNA5SP403-201ENST00000363598 108 ntBASIC1.28□□□□□ -2.2
LIMS2Q7Z4I7 RNU6-649P-201ENST00000384463 107 ntBASIC1.28□□□□□ -2.2
LIMS2Q7Z4I7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
LIMS2Q7Z4I7 MIR3675-201ENST00000583661 73 ntBASIC1.28□□□□□ -2.2
LIMS2Q7Z4I7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 Y_RNA.32-201ENST00000362589 110 ntBASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 SNORD12-201ENST00000391002 90 ntBASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 RNU1-119P-201ENST00000391122 165 ntBASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 MIR1827-201ENST00000408549 66 ntBASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 RNU6-1052P-201ENST00000411398 104 ntBASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 RNU6-977P-201ENST00000516411 103 ntBASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 RNU6-719P-201ENST00000516671 104 ntBASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 SNORA31.14-201ENST00000516728 116 ntBASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.27□□□□□ -2.21
LIMS2Q7Z4I7 RNU6-1177P-201ENST00000391058 104 ntBASIC1.26□□□□□ -2.21
LIMS2Q7Z4I7 MIR548AG2-201ENST00000581228 64 ntBASIC1.26□□□□□ -2.21
LIMS2Q7Z4I7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
LIMS2Q7Z4I7 MIR1-1-201ENST00000362147 71 ntBASIC1.25□□□□□ -2.21
LIMS2Q7Z4I7 Y_RNA.174-201ENST00000363781 105 ntBASIC1.25□□□□□ -2.21
LIMS2Q7Z4I7 MIR154-201ENST00000385243 84 ntBASIC1.25□□□□□ -2.21
LIMS2Q7Z4I7 RNU6-994P-201ENST00000410507 111 ntBASIC1.25□□□□□ -2.21
LIMS2Q7Z4I7 MIR3920-201ENST00000581751 86 ntBASIC1.25□□□□□ -2.21
LIMS2Q7Z4I7 U6.111-201ENST00000636093 83 ntBASIC1.25□□□□□ -2.21
LIMS2Q7Z4I7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LIMS2Q7Z4I7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 Y_RNA.258-201ENST00000364613 105 ntBASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 RNU6-1126P-201ENST00000384002 107 ntBASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 RNU6-800P-201ENST00000384473 103 ntBASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 MIR100-201ENST00000385259 80 ntBASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 AC125388.1-201ENST00000459631 156 ntBASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 SNORA70.22-201ENST00000517160 124 ntBASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 RNU7-161P-201ENST00000517289 62 ntBASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 MIR4781-201ENST00000585250 76 ntBASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 RMST_2.1-201ENST00000617263 136 ntBASIC1.24□□□□□ -2.21
LIMS2Q7Z4I7 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
LIMS2Q7Z4I7 SNORD30.1-201ENST00000391309 70 ntBASIC1.23□□□□□ -2.21
LIMS2Q7Z4I7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.23□□□□□ -2.21
LIMS2Q7Z4I7 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
LIMS2Q7Z4I7 MIR6078-201ENST00000611069 100 ntBASIC1.23□□□□□ -2.21
LIMS2Q7Z4I7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
LIMS2Q7Z4I7 SNORD115-24-201ENST00000363528 82 ntBASIC1.22□□□□□ -2.21
LIMS2Q7Z4I7 Y_RNA.340-201ENST00000365330 92 ntBASIC1.22□□□□□ -2.21
LIMS2Q7Z4I7 MIR520F-201ENST00000384824 87 ntBASIC1.22□□□□□ -2.21
LIMS2Q7Z4I7 RNU6-663P-201ENST00000391105 106 ntBASIC1.22□□□□□ -2.21
LIMS2Q7Z4I7 RNU7-13P-201ENST00000516413 62 ntBASIC1.22□□□□□ -2.21
LIMS2Q7Z4I7 RNU6-1057P-201ENST00000517162 102 ntBASIC1.22□□□□□ -2.21
LIMS2Q7Z4I7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LIMS2Q7Z4I7 SNORD115-22-201ENST00000364456 82 ntBASIC1.21□□□□□ -2.22
LIMS2Q7Z4I7 RNU6-382P-201ENST00000365181 106 ntBASIC1.21□□□□□ -2.22
LIMS2Q7Z4I7 RNU6-471P-201ENST00000383944 106 ntBASIC1.21□□□□□ -2.22
LIMS2Q7Z4I7 RNU7-24P-201ENST00000458867 62 ntBASIC1.21□□□□□ -2.22
LIMS2Q7Z4I7 RNU6-752P-201ENST00000516376 102 ntBASIC1.21□□□□□ -2.22
LIMS2Q7Z4I7 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.21□□□□□ -2.22
LIMS2Q7Z4I7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
LIMS2Q7Z4I7 MIR617-201ENST00000385030 97 ntBASIC1.2□□□□□ -2.22
LIMS2Q7Z4I7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.2□□□□□ -2.22
LIMS2Q7Z4I7 AC002350.1-201ENST00000490759 375 ntBASIC1.2□□□□□ -2.22
LIMS2Q7Z4I7 MIR8053-201ENST00000613344 75 ntBASIC1.2□□□□□ -2.22
LIMS2Q7Z4I7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.2□□□□□ -2.22
LIMS2Q7Z4I7 RNU6-495P-201ENST00000362995 107 ntBASIC1.19□□□□□ -2.22
LIMS2Q7Z4I7 SNORD45.1-201ENST00000363181 77 ntBASIC1.19□□□□□ -2.22
LIMS2Q7Z4I7 Y_RNA.205-201ENST00000364128 113 ntBASIC1.19□□□□□ -2.22
LIMS2Q7Z4I7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
LIMS2Q7Z4I7 AC005520.4-201ENST00000604337 90 ntBASIC1.19□□□□□ -2.22
LIMS2Q7Z4I7 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
LIMS2Q7Z4I7 SNORD45A-201ENST00000384512 84 ntBASIC1.18□□□□□ -2.22
LIMS2Q7Z4I7 MIR216B-201ENST00000390186 82 ntBASIC1.18□□□□□ -2.22
LIMS2Q7Z4I7 MIR1287-201ENST00000408492 90 ntBASIC1.18□□□□□ -2.22
LIMS2Q7Z4I7 SNORD75.2-201ENST00000408784 58 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms