Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
LYSMD3Q7Z3D4 RNU6-1039P-201ENST00000383931 107 ntBASIC1.88□□□□□ -2.11
LYSMD3Q7Z3D4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.88□□□□□ -2.11
LYSMD3Q7Z3D4 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
LYSMD3Q7Z3D4 RNU7-161P-201ENST00000517289 62 ntBASIC1.88□□□□□ -2.11
LYSMD3Q7Z3D4 MIR6845-201ENST00000613182 61 ntBASIC1.88□□□□□ -2.11
LYSMD3Q7Z3D4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
LYSMD3Q7Z3D4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LYSMD3Q7Z3D4 MIR100-201ENST00000385259 80 ntBASIC1.87□□□□□ -2.11
LYSMD3Q7Z3D4 MIR6509-201ENST00000614603 85 ntBASIC1.87□□□□□ -2.11
LYSMD3Q7Z3D4 MIR216B-201ENST00000390186 82 ntBASIC1.86□□□□□ -2.11
LYSMD3Q7Z3D4 AL359821.1-201ENST00000605519 182 ntBASIC1.86□□□□□ -2.11
LYSMD3Q7Z3D4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.85□□□□□ -2.11
LYSMD3Q7Z3D4 SNORA80D-201ENST00000384488 135 ntBASIC1.85□□□□□ -2.11
LYSMD3Q7Z3D4 MIR203A-201ENST00000384836 110 ntBASIC1.85□□□□□ -2.11
LYSMD3Q7Z3D4 RNU6-910P-201ENST00000390844 107 ntBASIC1.85□□□□□ -2.11
LYSMD3Q7Z3D4 AC079150.2-201ENST00000443733 78 ntBASIC1.85□□□□□ -2.11
LYSMD3Q7Z3D4 MTND4LP1-201ENST00000446263 157 ntBASIC1.85□□□□□ -2.11
LYSMD3Q7Z3D4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LYSMD3Q7Z3D4 RNU6-668P-201ENST00000364180 107 ntBASIC1.84□□□□□ -2.11
LYSMD3Q7Z3D4 MIR520F-201ENST00000384824 87 ntBASIC1.84□□□□□ -2.11
LYSMD3Q7Z3D4 MIR617-201ENST00000385030 97 ntBASIC1.84□□□□□ -2.11
LYSMD3Q7Z3D4 RNU1-78P-201ENST00000391248 165 ntBASIC1.84□□□□□ -2.11
LYSMD3Q7Z3D4 RNU6-141P-201ENST00000410499 105 ntBASIC1.84□□□□□ -2.11
LYSMD3Q7Z3D4 RNU7-90P-201ENST00000459216 62 ntBASIC1.84□□□□□ -2.11
LYSMD3Q7Z3D4 RNU7-104P-201ENST00000459398 79 ntBASIC1.84□□□□□ -2.11
LYSMD3Q7Z3D4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
LYSMD3Q7Z3D4 MIR548O2-201ENST00000616090 70 ntBASIC1.84□□□□□ -2.11
LYSMD3Q7Z3D4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LYSMD3Q7Z3D4 MIR1-1-201ENST00000362147 71 ntBASIC1.83□□□□□ -2.12
LYSMD3Q7Z3D4 RNU1-17P-201ENST00000363022 152 ntBASIC1.83□□□□□ -2.12
LYSMD3Q7Z3D4 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
LYSMD3Q7Z3D4 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
LYSMD3Q7Z3D4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LYSMD3Q7Z3D4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.83□□□□□ -2.12
LYSMD3Q7Z3D4 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
LYSMD3Q7Z3D4 AC073869.9-201ENST00000641610 120 ntBASIC1.83□□□□□ -2.12
LYSMD3Q7Z3D4 RNU6-54P-201ENST00000365563 107 ntBASIC1.82□□□□□ -2.12
LYSMD3Q7Z3D4 MIR519E-201ENST00000385075 84 ntBASIC1.82□□□□□ -2.12
LYSMD3Q7Z3D4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.82□□□□□ -2.12
LYSMD3Q7Z3D4 SNORD79.1-201ENST00000516069 84 ntBASIC1.82□□□□□ -2.12
LYSMD3Q7Z3D4 RNU6-614P-201ENST00000384369 107 ntBASIC1.81□□□□□ -2.12
LYSMD3Q7Z3D4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.81□□□□□ -2.12
LYSMD3Q7Z3D4 AC067940.1-201ENST00000458411 300 ntBASIC1.81□□□□□ -2.12
LYSMD3Q7Z3D4 RNU1-123P-201ENST00000458950 160 ntBASIC1.81□□□□□ -2.12
LYSMD3Q7Z3D4 U6.59-201ENST00000615686 107 ntBASIC1.81□□□□□ -2.12
LYSMD3Q7Z3D4 Y_RNA.375-201ENST00000365625 101 ntBASIC1.8□□□□□ -2.12
LYSMD3Q7Z3D4 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
LYSMD3Q7Z3D4 RNU6-542P-201ENST00000516405 103 ntBASIC1.8□□□□□ -2.12
LYSMD3Q7Z3D4 MIR4422-201ENST00000581938 83 ntBASIC1.8□□□□□ -2.12
LYSMD3Q7Z3D4 MIR3657-201ENST00000584818 117 ntBASIC1.8□□□□□ -2.12
LYSMD3Q7Z3D4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LYSMD3Q7Z3D4 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
LYSMD3Q7Z3D4 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
LYSMD3Q7Z3D4 AC092634.7-201ENST00000621022 103 ntBASIC1.79□□□□□ -2.12
LYSMD3Q7Z3D4 AC067863.3-201ENST00000624172 122 ntBASIC1.79□□□□□ -2.12
LYSMD3Q7Z3D4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.79□□□□□ -2.12
LYSMD3Q7Z3D4 SNORD42B-201ENST00000458893 67 ntBASIC1.78□□□□□ -2.12
LYSMD3Q7Z3D4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.78□□□□□ -2.12
LYSMD3Q7Z3D4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.78□□□□□ -2.12
LYSMD3Q7Z3D4 AL136317.1-201ENST00000612653 226 ntBASIC1.78□□□□□ -2.12
LYSMD3Q7Z3D4 AC084768.2-201ENST00000622736 221 ntBASIC1.78□□□□□ -2.12
LYSMD3Q7Z3D4 RNU6-645P-201ENST00000364649 106 ntBASIC1.77□□□□□ -2.13
LYSMD3Q7Z3D4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.77□□□□□ -2.13
LYSMD3Q7Z3D4 RNU6-260P-201ENST00000384092 107 ntBASIC1.77□□□□□ -2.13
LYSMD3Q7Z3D4 MIR1827-201ENST00000408549 66 ntBASIC1.77□□□□□ -2.13
LYSMD3Q7Z3D4 RNU6-902P-201ENST00000517212 91 ntBASIC1.77□□□□□ -2.13
LYSMD3Q7Z3D4 MIR4781-201ENST00000585250 76 ntBASIC1.77□□□□□ -2.13
LYSMD3Q7Z3D4 RMST_2.1-201ENST00000617263 136 ntBASIC1.77□□□□□ -2.13
LYSMD3Q7Z3D4 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
LYSMD3Q7Z3D4 RNU6V-201ENST00000384105 107 ntBASIC1.76□□□□□ -2.13
LYSMD3Q7Z3D4 SNORA25.15-201ENST00000516487 89 ntBASIC1.76□□□□□ -2.13
LYSMD3Q7Z3D4 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
LYSMD3Q7Z3D4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LYSMD3Q7Z3D4 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
LYSMD3Q7Z3D4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.75□□□□□ -2.13
LYSMD3Q7Z3D4 RNU6-829P-201ENST00000363700 112 ntBASIC1.74□□□□□ -2.13
LYSMD3Q7Z3D4 SNORA25.5-201ENST00000363782 126 ntBASIC1.74□□□□□ -2.13
LYSMD3Q7Z3D4 MIR644A-201ENST00000385262 94 ntBASIC1.74□□□□□ -2.13
LYSMD3Q7Z3D4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LYSMD3Q7Z3D4 RNA5SP192-201ENST00000364404 120 ntBASIC1.73□□□□□ -2.13
LYSMD3Q7Z3D4 RNA5SP190-201ENST00000365222 118 ntBASIC1.73□□□□□ -2.13
LYSMD3Q7Z3D4 MIR7-2-201ENST00000384970 110 ntBASIC1.73□□□□□ -2.13
LYSMD3Q7Z3D4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.73□□□□□ -2.13
LYSMD3Q7Z3D4 AC002350.1-201ENST00000490759 375 ntBASIC1.73□□□□□ -2.13
LYSMD3Q7Z3D4 MIR4498-201ENST00000577599 66 ntBASIC1.73□□□□□ -2.13
LYSMD3Q7Z3D4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.73□□□□□ -2.13
LYSMD3Q7Z3D4 AC108667.1-201ENST00000428618 249 ntBASIC1.72□□□□□ -2.13
LYSMD3Q7Z3D4 SNORA70.22-201ENST00000517160 124 ntBASIC1.72□□□□□ -2.13
LYSMD3Q7Z3D4 SNORA40.17-201ENST00000517256 115 ntBASIC1.72□□□□□ -2.13
LYSMD3Q7Z3D4 RNU6-1079P-201ENST00000362861 110 ntBASIC1.71□□□□□ -2.14
LYSMD3Q7Z3D4 RNA5SP117-201ENST00000365294 118 ntBASIC1.71□□□□□ -2.14
LYSMD3Q7Z3D4 SNORA67.5-201ENST00000391036 107 ntBASIC1.71□□□□□ -2.14
LYSMD3Q7Z3D4 MIR466-201ENST00000580653 84 ntBASIC1.71□□□□□ -2.14
LYSMD3Q7Z3D4 SNORA2.1-201ENST00000363089 137 ntBASIC1.7□□□□□ -2.14
LYSMD3Q7Z3D4 Y_RNA.236-201ENST00000364427 111 ntBASIC1.7□□□□□ -2.14
LYSMD3Q7Z3D4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LYSMD3Q7Z3D4 SNORD41.1-201ENST00000391000 69 ntBASIC1.7□□□□□ -2.14
LYSMD3Q7Z3D4 RNU7-74P-201ENST00000459104 62 ntBASIC1.7□□□□□ -2.14
LYSMD3Q7Z3D4 SCARNA21.1-201ENST00000515996 128 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms