Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 RNU4-63P-201ENST00000411313 118 ntBASIC-0.79□□□□□ -2.54
TRIM40Q6P9F5 AL353813.1-201ENST00000440700 253 ntBASIC-0.79□□□□□ -2.54
TRIM40Q6P9F5 SNORD114-14-201ENST00000362723 75 ntBASIC-0.8□□□□□ -2.54
TRIM40Q6P9F5 RNU6-151P-201ENST00000364158 107 ntBASIC-0.8□□□□□ -2.54
TRIM40Q6P9F5 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.8□□□□□ -2.54
TRIM40Q6P9F5 MTND3P2-201ENST00000438452 342 ntBASIC-0.8□□□□□ -2.54
TRIM40Q6P9F5 RNU7-120P-201ENST00000459334 63 ntBASIC-0.8□□□□□ -2.54
TRIM40Q6P9F5 MIR4696-201ENST00000581431 70 ntBASIC-0.8□□□□□ -2.54
TRIM40Q6P9F5 MIR4436A-201ENST00000585278 85 ntBASIC-0.8□□□□□ -2.54
TRIM40Q6P9F5 MIR548O2-201ENST00000616090 70 ntBASIC-0.8□□□□□ -2.54
TRIM40Q6P9F5 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.8□□□□□ -2.54
TRIM40Q6P9F5 RNU6-664P-201ENST00000362381 107 ntBASIC-0.81□□□□□ -2.54
TRIM40Q6P9F5 RNU6-409P-201ENST00000384114 104 ntBASIC-0.81□□□□□ -2.54
TRIM40Q6P9F5 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.81□□□□□ -2.54
TRIM40Q6P9F5 MIR513C-201ENST00000401352 84 ntBASIC-0.81□□□□□ -2.54
TRIM40Q6P9F5 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.81□□□□□ -2.54
TRIM40Q6P9F5 SNORA81.3-201ENST00000517283 198 ntBASIC-0.81□□□□□ -2.54
TRIM40Q6P9F5 RNU6-235P-201ENST00000362644 107 ntBASIC-0.82□□□□□ -2.54
TRIM40Q6P9F5 RNU6-682P-201ENST00000363843 106 ntBASIC-0.82□□□□□ -2.54
TRIM40Q6P9F5 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.82□□□□□ -2.54
TRIM40Q6P9F5 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.82□□□□□ -2.54
TRIM40Q6P9F5 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.82□□□□□ -2.54
TRIM40Q6P9F5 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.82□□□□□ -2.54
TRIM40Q6P9F5 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.82□□□□□ -2.54
TRIM40Q6P9F5 AP001328.1-201ENST00000528550 176 ntBASIC-0.82□□□□□ -2.54
TRIM40Q6P9F5 AP001340.1-201ENST00000624405 217 ntBASIC-0.82□□□□□ -2.54
TRIM40Q6P9F5 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.83□□□□□ -2.54
TRIM40Q6P9F5 RNU6-901P-201ENST00000384593 106 ntBASIC-0.83□□□□□ -2.54
TRIM40Q6P9F5 RNU6-935P-201ENST00000410371 100 ntBASIC-0.83□□□□□ -2.54
TRIM40Q6P9F5 AL445193.1-201ENST00000441183 141 ntBASIC-0.83□□□□□ -2.54
TRIM40Q6P9F5 SNORD115-25-201ENST00000362619 82 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 RNU6-694P-201ENST00000364071 147 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 SNORD56B-201ENST00000384713 71 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 SNORA49-201ENST00000386157 136 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 snoU13.11-201ENST00000459219 104 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 RNA5SP476-201ENST00000516613 103 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 AL442128.1-201ENST00000615151 90 ntBASIC-0.84□□□□□ -2.54
TRIM40Q6P9F5 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.85□□□□□ -2.55
TRIM40Q6P9F5 RNU6-574P-201ENST00000384265 107 ntBASIC-0.85□□□□□ -2.55
TRIM40Q6P9F5 SNORA3B-201ENST00000391305 131 ntBASIC-0.85□□□□□ -2.55
TRIM40Q6P9F5 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.85□□□□□ -2.55
TRIM40Q6P9F5 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.85□□□□□ -2.55
TRIM40Q6P9F5 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.85□□□□□ -2.55
TRIM40Q6P9F5 RNY4P6-201ENST00000363667 96 ntBASIC-0.86□□□□□ -2.55
TRIM40Q6P9F5 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.86□□□□□ -2.55
TRIM40Q6P9F5 AL158147.1-201ENST00000443970 75 ntBASIC-0.86□□□□□ -2.55
TRIM40Q6P9F5 SNORD2-201ENST00000459163 69 ntBASIC-0.86□□□□□ -2.55
TRIM40Q6P9F5 RNU6-138P-201ENST00000515952 107 ntBASIC-0.86□□□□□ -2.55
TRIM40Q6P9F5 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.86□□□□□ -2.55
TRIM40Q6P9F5 RNA5SP169-201ENST00000517268 117 ntBASIC-0.86□□□□□ -2.55
TRIM40Q6P9F5 AC145423.2-201ENST00000610631 239 ntBASIC-0.86□□□□□ -2.55
TRIM40Q6P9F5 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.87□□□□□ -2.55
TRIM40Q6P9F5 RNU6-200P-201ENST00000364743 107 ntBASIC-0.87□□□□□ -2.55
TRIM40Q6P9F5 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.87□□□□□ -2.55
TRIM40Q6P9F5 RNY1P7-201ENST00000384743 110 ntBASIC-0.87□□□□□ -2.55
TRIM40Q6P9F5 MIR204-201ENST00000385200 110 ntBASIC-0.87□□□□□ -2.55
TRIM40Q6P9F5 RNU7-55P-201ENST00000459426 62 ntBASIC-0.87□□□□□ -2.55
TRIM40Q6P9F5 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.87□□□□□ -2.55
TRIM40Q6P9F5 RNU6-781P-201ENST00000516377 101 ntBASIC-0.87□□□□□ -2.55
TRIM40Q6P9F5 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.87□□□□□ -2.55
TRIM40Q6P9F5 SNORA40.17-201ENST00000517256 115 ntBASIC-0.87□□□□□ -2.55
TRIM40Q6P9F5 SNORD116-18-201ENST00000383961 92 ntBASIC-0.88□□□□□ -2.55
TRIM40Q6P9F5 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.88□□□□□ -2.55
TRIM40Q6P9F5 snoU13.13-201ENST00000458842 104 ntBASIC-0.88□□□□□ -2.55
TRIM40Q6P9F5 MIR4280-201ENST00000582178 76 ntBASIC-0.88□□□□□ -2.55
TRIM40Q6P9F5 U7.2-201ENST00000607576 63 ntBASIC-0.88□□□□□ -2.55
TRIM40Q6P9F5 SNORD114-15-201ENST00000364687 72 ntBASIC-0.89□□□□□ -2.55
TRIM40Q6P9F5 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.89□□□□□ -2.55
TRIM40Q6P9F5 MIR451A-201ENST00000385059 72 ntBASIC-0.89□□□□□ -2.55
TRIM40Q6P9F5 RNU6-816P-201ENST00000390914 107 ntBASIC-0.89□□□□□ -2.55
TRIM40Q6P9F5 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.89□□□□□ -2.55
TRIM40Q6P9F5 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.89□□□□□ -2.55
TRIM40Q6P9F5 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.89□□□□□ -2.55
TRIM40Q6P9F5 MIR548AX-201ENST00000580117 73 ntBASIC-0.89□□□□□ -2.55
TRIM40Q6P9F5 MIR6851-201ENST00000617060 67 ntBASIC-0.89□□□□□ -2.55
TRIM40Q6P9F5 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.9□□□□□ -2.55
TRIM40Q6P9F5 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.9□□□□□ -2.55
TRIM40Q6P9F5 RNU6-54P-201ENST00000365563 107 ntBASIC-0.9□□□□□ -2.55
TRIM40Q6P9F5 U3.27-201ENST00000391237 200 ntBASIC-0.9□□□□□ -2.55
TRIM40Q6P9F5 MIR548X2-201ENST00000579776 100 ntBASIC-0.9□□□□□ -2.55
TRIM40Q6P9F5 MIR3681-201ENST00000580089 72 ntBASIC-0.9□□□□□ -2.55
TRIM40Q6P9F5 SNORD114-4-201ENST00000363962 75 ntBASIC-0.91□□□□□ -2.56
TRIM40Q6P9F5 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.91□□□□□ -2.56
TRIM40Q6P9F5 RNU6-463P-201ENST00000384340 107 ntBASIC-0.91□□□□□ -2.56
TRIM40Q6P9F5 AC021146.6-201ENST00000514659 117 ntBASIC-0.91□□□□□ -2.56
TRIM40Q6P9F5 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.91□□□□□ -2.56
TRIM40Q6P9F5 RNU6-762P-201ENST00000517107 102 ntBASIC-0.91□□□□□ -2.56
TRIM40Q6P9F5 MIR582-201ENST00000365731 98 ntBASIC-0.92□□□□□ -2.56
TRIM40Q6P9F5 MIR548E-201ENST00000408287 88 ntBASIC-0.92□□□□□ -2.56
TRIM40Q6P9F5 RNU6-394P-201ENST00000410735 107 ntBASIC-0.92□□□□□ -2.56
TRIM40Q6P9F5 RNU6-75P-201ENST00000515944 104 ntBASIC-0.92□□□□□ -2.56
TRIM40Q6P9F5 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.92□□□□□ -2.56
TRIM40Q6P9F5 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.93□□□□□ -2.56
TRIM40Q6P9F5 MIR196A1-201ENST00000388006 70 ntBASIC-0.93□□□□□ -2.56
TRIM40Q6P9F5 SNORA13-201ENST00000458790 133 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms